Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq194 150 2e-31 seq98 114 1e-20 seq208 111 1e-19 seq103 84.2 2e-11 >seq194 Length=282305 Score = 150 bits (166), Expect = 2e-31 Identities = 365/553 (66%), Gaps = 0/553 (0%) Strand=Plus/Plus Query 13143 ACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAA 13202 ||| || ||| ||||||||||| |||| ||||| || | ||| || | || || |||| Sbjct 115790 ACAACAAACAGGCAAAATCACAATGCAGACCTTCGTCGCGACTGATCAATTCATTGGAAA 115849 Query 13203 ATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCG 13262 | ||||| |||||||| || ||||| || | ||| || || ||| ||||| || | Sbjct 115850 AGCAGAGACCGGGCATAAGACCCCGTTTCTTGAGCCAGAAAATGGCACAGAACGAGCCGG 115909 Query 13263 aaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTT 13322 |||| || || ||||| || || ||||| || | | | ||| || | | | || | Sbjct 115910 AAAAGAAAATGCCTTCGACGGCCGCAAATGCGACGCAACGTTCGGCAAAGGAAGCATGGT 115969 Query 13323 TACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTA 13382 | || ||| | ||||||||| || || | || || || | | || | Sbjct 115970 TGGCGTCACACCATTGCAAGGCCCAGTTGGCCTTCTTTTGTACACACGGGACCGTATCAA 116029 Query 13383 TTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGC 13442 | || || |||| || ||||||||| ||| ||| || ||||| || | ||| Sbjct 116030 TGGCCCGCAACAAATGATCTTTTTCCTTGGGGTCACGAATGTAGGTATCAATGAGTAACG 116089 Query 13443 TATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCT 13502 ||| | || |||||| ||||| | || |||||||| ||||||||||| | || | Sbjct 116090 AGTACGTCTCACTATGAATGTTTTCGACGGCAATTTGGAATCCATAAAAACAGCGGGCTT 116149 Query 13503 CTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCAC 13562 ||| | |||| ||||| |||| ||| || || ||||| || || || ||||| Sbjct 116150 CTGGTGATTGAATTTCGGTACAAAAGTTTTGCGCCAAATTTTCATTCACAATACCGTCCG 116209 Query 13563 TAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAACTTTA 13622 || ||||| || || | | ||| | ||| | | |||||| ||||| || Sbjct 116210 AGGCGGCAAAGAACGCCAAAACGTGTGACACAAAGTGTCGTTCGTTGCTGGACAAATTCT 116269 Query 13623 ACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAG 13682 ||||||| | ||||| | | ||||| | || || | ||||| |||||||| | | Sbjct 116270 TCCAATCTTGCAAATCACTGGCCAAATCAATTTCTTCGGCCGTCCAGAAAGAAGCTTCGG 116329 Query 13683 CCTTCTTATACAT 13695 | || || ||||| Sbjct 116330 CTTTTTTGTACAT 116342 >seq98 Length=427084 Score = 114 bits (126), Expect = 1e-20 Identities = 353/546 (65%), Gaps = 0/546 (0%) Strand=Plus/Plus Query 13150 ACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAG 13209 ||| ||||||||||| |||| ||||| || | ||| || | ||||| ||||| || Sbjct 135036 ACAGGCAAAATCACAATGCAGACCTTCGTCGCGACTAATCAATTCGTTGGAAAAGCAAAG 135095 Query 13210 ACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaa 13269 ||| ||||| || || ||||| || | |||||| || ||| ||| ||||| ||||| || Sbjct 135096 ACCGGGCATGAGACCCCGTTTCTTGAGCCAAAAAATGGCACAAAAGGAACCGGAAAAGAA 135155 Query 13270 TATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTC 13329 || ||||| || || ||||| || | | | ||| || | | | || || || Sbjct 135156 AATGCCTTCGACGGCCGCAAAGGCGACACAGCGTTCCGCAAAGGAAGCGTTGTTCGCGTC 135215 Query 13330 TATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTT 13389 ||| | |||||| | || || | || || || | | || || || Sbjct 135216 ACACCATTGCAAGGCCCAATGGGCCTTCTTTTGTACACACGGAACCGTATCAATGGCCCG 135275 Query 13390 AAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACAT 13449 || |||| || || || || || ||| || ||||| ||||| | ||| | Sbjct 135276 CAACAAATGATCCTTCTCTTTCGGATCGCGAATGTACGTATCAATCAAAAGAGAATAGGT 135335 Query 13450 TTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATAC 13509 ||| ||||| ||||| | || |||||||| || |||||||| | || || | Sbjct 135336 TTCGCTGTGAATGTTTTCGACGGCAATTTGGAATCCGTAAAAACAACGGGCTTCCGGCGA 135395 Query 13510 CTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGC 13569 |||| ||||| |||| ||| ||| || ||||| || || || ||||| || || Sbjct 135396 TTGAATTTCGGTACAAAAGTTTTGTGCCAAATTTTCATTCACAATGCCGTCGGACGCGGC 135455 Query 13570 aaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAACTTTAACCAATC 13629 ||| || || | | |||| | ||| | |||||| ||||| | | |||||| Sbjct 135456 AAAGAACGCCAACACGTGCGACACAAAGTGACGTTCGTTGCTCGACAAATGTTTCCAATC 135515 Query 13630 TGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTT 13689 | | ||||| | | | ||| | || || | |||||||| ||||| | || || || Sbjct 135516 TTGCAAATCACTGGCGAGATCAATTTCTTCGGCCGTCCAAAAGGAAGCTTCGGCTTTTTT 135575 Query 13690 ATACAT 13695 ||||| Sbjct 135576 GTACAT 135581 >seq208 Length=180812 Score = 111 bits (122), Expect = 1e-19 Identities = 295/450 (66%), Gaps = 8/450 (2%) Strand=Plus/Minus Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919 ||||||||||| | |||| |||||| ||||||||||| ||||| || || || | Sbjct 73347 TTTTGATATTCCCCGACTCGTTTTTCGAAAAAGTTTGTCTTTCCCTCCAAACTGATCATA 73288 Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTACACCCTAATTCTAGTAAC 12979 ||||| |||| || ||||| ||| | | | || | | || || || | ||| Sbjct 73287 TCCATCCAATCAAATGGATTCCGCGATCCAAACAATGGTCGGTATCCCAAATCATGCAAC 73228 Query 12980 AATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAAT 13039 |||| || || ||||| || ||||||||| ||| | | |||||| || || || Sbjct 73227 AATCGATCGGCCACAAATTCAATGTACTGTGACATGAGACTGGCGTTCATGCCAATCAAA 73168 Query 13040 TTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATG 13099 | || |||| || || | || |||||| | || || ||||| || | | Sbjct 73167 CTCACGGGCAAGGCCTCGCACACGAATCCTTTTTCGACCTCGACAGCTTCCGCAATCACG 73108 Query 13100 TCTCTTATTACGTTCTCTAATGGAGGATTTGAT----AGATGCTTAAACATCATACATGC 13155 | || | |||| || |||||| | | | ||| | || || Sbjct 73107 GC----ATGAATGTCTCGTTCCGACAATTTGACTTCCAACTTTTGGTACAGCTGGCAGGC 73052 Query 13156 AAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGG 13215 ||| |||||||| ||||||||| | ||| || || || || ||| || | ||| || Sbjct 73051 AAACGAACAGTGCAGTCCTTCATCGCGACTAATGAGTTCATTACTAAACGTCAAACCGGG 72992 Query 13216 CATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCC 13275 ||| ||||||||||| || | |||||| || ||| ||| | |||||||| || || || Sbjct 72991 CATCAGCCCTCGTTTCTTGAGCCAAAAGATGGCACAAAAAGCTCCCGAAAAGAAGATCCC 72932 Query 13276 TTCAACTGCTGCAAACGCTATCAACCTTTC 13305 ||| || || ||||| || | ||||| ||| Sbjct 72931 TTCCACGGCCGCAAAGGCCACCAACCGTTC 72902 >seq103 Length=133562 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 13151 CATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGA 13210 || ||||| |||||||||||||||||| | ||| || || || || || || | Sbjct 27655 CAGGCAAACGAACAGTGCAATCCTTCATCACGACTAATGAGTTCATTGCTGAACGTCAAT 27596 Query 13211 CCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaT 13270 || ||||| || || ||||| || | |||||| || ||| ||| | |||||||| || Sbjct 27595 CCGGGCATGAGTCCCCGTTTCTTGAGCCAAAAAATGGCACAAAAGGCGCCCGAAAAGAAG 27536 Query 13271 ATTCCTTCAACTGCTGCAAACGCTATCAA 13299 || ||||| || || ||||| || | ||| Sbjct 27535 ATGCCTTCCACGGCCGCAAAGGCCACCAA 27507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430980850483590