Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq194 138 1e-27 seq98 114 1e-20 seq208 95.1 1e-14 >seq194 Length=282305 Score = 138 bits (152), Expect = 1e-27 Identities = 369/564 (65%), Gaps = 4/564 (1%) Strand=Plus/Plus Query 21468 ACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAA 21527 ||| |||||| |||||||||||||||| |||||| || | ||| || |||||||| |||| Sbjct 115790 ACAACAAACAGGCAAAATCACAATGCAGACCTTCGTCGCGACTGATCAATTCATTGGAAA 115849 Query 21528 ATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCA-AATGCTCCT 21586 | | ||||||||| | || | || || | ||| || | || | || || | || Sbjct 115850 AGCAGAGACCGGGCATAAGACCCCGTTTCTTGAGCCAGAA-AATGGCACAGAACGAGCCG 115908 Query 21587 GAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCT 21646 |||||||||||||| || ||||| |||||||| || | ||||| | | | || | Sbjct 115909 GAAAAGAAAATGCCTTCGACGGCCGCAAATGCGACGCAACGTTCGGCAAAGGAAGCATGG 115968 Query 21647 TTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCA 21706 || | ||||| ||||| || ||||| | || | ||| | |||||| Sbjct 115969 TTGGCGTCACACCATTGCAAGGCCCAGTTGGCCTTCTTTTGTACACACGGGACCGTATCA 116028 Query 21707 ATAGCTTTTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNA 21766 || || || | ||||| |||||| | || ||| | Sbjct 116029 ATGGCCCGCAACAAATGATCTTTTTCCTTGGGGTCACGAATG-TAGGTATCAATGAGTAA 116087 Query 21767 CTA-TACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGC 21825 | | ||| | ||| ||| || ||||| | || || || ||||| |||||||| | || Sbjct 116088 CGAGTACGTCTCACTATGAATGTTTTCGACGGCAATTTGGAATCCATAAAAACAGCGGGC 116147 Query 21826 CTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATC 21885 |||| |||||| |||| | |||| ||| ||||| |||||||| || || || || Sbjct 116148 TTCTGGTGATTGAATTTCGGTACAAAAGTTTTGCGCCAAATTTTCATTCACAATACCGTC 116207 Query 21886 ACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTT 21945 ||||||||| || ||||| | | | | ||| | ||||||||| | || || Sbjct 116208 CGAGGCGGCAAAGAACGCCAAAACGTGTGACACAAAGTGTCGTTCGTTGCTGGACAAATT 116267 Query 21946 TTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAAT 22005 ||||||||| ||||| | | ||||| | |||||| | ||||| || ||| Sbjct 116268 CTTCCAATCTTGCAAATCACTGGCCAAATCAATTTCTTCGGCCGTCCAGAAAGAAGCTTC 116327 Query 22006 AGCCTTTTTATACATAATCCAGAT 22029 || ||||| ||||| |||||| Sbjct 116328 GGCTTTTTTGTACATTTGCCAGAT 116351 >seq98 Length=427084 Score = 114 bits (126), Expect = 1e-20 Identities = 355/555 (64%), Gaps = 0/555 (0%) Strand=Plus/Plus Query 21475 ACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAA 21534 ||| |||||||||||||||| |||||| || | ||| || ||||| || ||||| | Sbjct 135036 ACAGGCAAAATCACAATGCAGACCTTCGTCGCGACTAATCAATTCGTTGGAAAAGCAAAG 135095 Query 21535 ACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAA 21594 ||||||||| | || | || || | |||||| || | ||| | || |||||||| Sbjct 135096 ACCGGGCATGAGACCCCGTTTCTTGAGCCAAAAAATGGCACAAAAGGAACCGGAAAAGAA 135155 Query 21595 AATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAA 21654 |||||| || ||||| ||||| || || | ||||| | | | || | || | Sbjct 135156 AATGCCTTCGACGGCCGCAAAGGCGACACAGCGTTCCGCAAAGGAAGCGTTGTTCGCGTC 135215 Query 21655 TATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTT 21714 ||||| ||||| | ||||| | || | ||| || |||||||| || Sbjct 135216 ACACCATTGCAAGGCCCAATGGGCCTTCTTTTGTACACACGGAACCGTATCAATGGCCCG 135275 Query 21715 TAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACAT 21774 || | ||||| || || | |||| ||| | ||| | Sbjct 135276 CAACAAATGATCCTTCTCTTTCGGATCGCGAATGTACGTATCAATCAAAAGAGAATAGGT 135335 Query 21775 TTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACA 21834 ||| || || ||||| | || || || |||||||||||||| | || || | | Sbjct 135336 TTCGCTGTGAATGTTTTCGACGGCAATTTGGAATCCGTAAAAACAACGGGCTTCCGGCGA 135395 Query 21835 TTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGC 21894 ||||| |||| | |||| ||| ||||| |||||||| || || || || ||||| Sbjct 135396 TTGAATTTCGGTACAAAAGTTTTGTGCCAAATTTTCATTCACAATGCCGTCGGACGCGGC 135455 Query 21895 AAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTTTTTCCAATC 21954 ||| || ||||| | | | ||| | |||||||| | || | ||||||||| Sbjct 135456 AAAGAACGCCAACACGTGCGACACAAAGTGACGTTCGTTGCTCGACAAATGTTTCCAATC 135515 Query 21955 TAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTTTTT 22014 | ||||| | | | ||| | |||||| | ||||||||| ||| || ||||| Sbjct 135516 TTGCAAATCACTGGCGAGATCAATTTCTTCGGCCGTCCAAAAGGAAGCTTCGGCTTTTTT 135575 Query 22015 ATACATAATCCAGAT 22029 ||||| |||||| Sbjct 135576 GTACATTTGCCAGAT 135590 >seq208 Length=180812 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 21476 CATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAA 21535 || ||||| ||| |||| |||||||| | ||| || | ||||||| ||| || ||| Sbjct 73056 CAGGCAAACGAACAGTGCAGTCCTTCATCGCGACTAATGAGTTCATTACTAAACGTCAAA 72997 Query 21536 CCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAA 21595 |||||||| | |||| || || | |||||| || | ||| ||||| |||||||| Sbjct 72996 CCGGGCATCAGCCCTCGTTTCTTGAGCCAAAAGATGGCACAAAAAGCTCCCGAAAAGAAG 72937 Query 21596 ATGCCCTCAACGGCAGCAAATGCAACTAATCGTTC 21630 || || || ||||| ||||| || || || ||||| Sbjct 72936 ATCCCTTCCACGGCCGCAAAGGCCACCAACCGTTC 72902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531898838615800