Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq226 95.1 1e-14 seq67 91.5 1e-13 seq142 86.0 5e-12 >seq226 Length=603765 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || || ||||| | || ||| |||| || ||| || Sbjct 85852 ATGCAGATTTTCGTCAAGACTTTGACCGGAAAGACCATCACCCTCGATGTTGAGCCCTCT 85793 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| ||||| || || || |||||| Sbjct 85792 GACACCATCGACAACGTCAAGACCAAGATCCAGGACAAGGAAGGAATTCCGCCTGATCAA 85733 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||| | | ||| ||||| ||||| || | | | | | ||||| || ||| Sbjct 85732 CAGCGTTTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACGTTGAGCGACTACAAC 85673 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 || || || || ||||| |||| || ||||| Sbjct 85672 ATCCAGAAGGAGTCTACTCTTCACTTGGTGTT 85641 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || || ||||| | || ||| |||| || ||| || Sbjct 86080 ATGCAGATTTTCGTCAAGACTTTGACCGGAAAGACCATCACCCTCGATGTTGAGCCCTCT 86021 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| ||||| || || || |||||| Sbjct 86020 GACACCATCGACAACGTCAAGACCAAGATCCAGGACAAGGAAGGAATTCCGCCTGATCAA 85961 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||| | | ||| ||||| ||||| || | | | | | ||||| || ||| Sbjct 85960 CAGCGTTTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACGTTGAGCGACTACAAC 85901 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 || || || || ||||| |||| || ||||| Sbjct 85900 ATCCAGAAGGAGTCTACTCTTCACTTGGTGTT 85869 >seq67 Length=439500 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 23985 AACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAG 24044 |||| |||||| | || ||||| ||| | || || || | |||||| | || || ||| Sbjct 3075 AACATCATGCAAATTTTCGTAAAGACACTGACGGGTAAGACCATTACCCTGGACGTTGAG 3016 Query 24045 GCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCC 24104 | ||||| ||||| | ||||| ||||| ||||| || || || || || Sbjct 3015 CCGTCGGACACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGAATTCCCCCG 2956 Query 24105 GATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGAT 24164 |||||||| || |||||| || ||| || ||| | ||||||| | | | || ||| Sbjct 2955 GATCAACAACGATTGATTTTCGCCGGTAAACAATTGGAAGATGGACGTACGTTGAGTGAT 2896 Query 24165 TATAACATTCAAAAAGAATCTAC 24187 || || ||||| ||||||||||| Sbjct 2895 TACAATATTCAGAAAGAATCTAC 2873 >seq142 Length=241092 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || ||||| ||| | || || || | |||||| | || || ||| | Sbjct 170543 ATGCAAATTTTCGTAAAGACACTGACGGGTAAGACCATTACCCTGGACGTTGAGCCTTCG 170484 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || ||||| | ||||| ||||| ||||| || || || || || |||||| Sbjct 170483 GATACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGAATTCCCCCGGATCAA 170424 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || || |||||| || ||| || ||| | ||||||| | | | || ||||| || Sbjct 170423 CAACGATTGATTTTCGCCGGTAAACAATTGGAAGATGGACGTACTTTGAGTGATTACAAT 170364 Query 24171 ATTCAAAAAGAATCTAC 24187 |||||||||||||| || Sbjct 170363 ATTCAAAAAGAATCCAC 170347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429934454245725