Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq226 143 3e-29 seq232 134 1e-26 seq41 122 8e-23 seq82 118 1e-21 seq2 113 4e-20 seq142 109 5e-19 seq120 107 2e-18 seq67 104 2e-17 >seq226 Length=603765 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||||| ||| || || | || |||||||| || |||||||| |||||| Sbjct 85626 CCACCGCGGAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 85685 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| |||||||| || || |||| |||||||| || || || || Sbjct 85686 AACGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGA 85745 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| ||| || ||||| | || | || || | || ||| | Sbjct 85746 ATTCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACA 85805 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || ||||| | ||| || |||||||||||||| Sbjct 85806 TCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 85852 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || ||||| | ||||| ||| || || | || |||||||| || |||||||| |||||| Sbjct 85854 CCTCCGCGGAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 85913 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| |||||||| || || |||| |||||||| || || || || Sbjct 85914 AACGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGA 85973 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| ||| || ||||| | || | || || | || ||| | Sbjct 85974 ATTCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACA 86033 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGAC 131237 |||| ||| | ||| || ||||| | ||| || |||||||||||||| || Sbjct 86034 TCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCATCAC 86083 >seq232 Length=134552 Score = 134 bits (148), Expect = 1e-26 Identities = 171/234 (73%), Gaps = 1/234 (0%) Strand=Plus/Plus Query 131003 ATGAGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAAT 131062 |||| ||||||||||| ||||| || | ||| | || ||||||||||| ||||||| Sbjct 133039 ATGA-CCACCGCGCAATCGCAGAACAAGATGCAAAGTGCTTTCCTTTTGAATATTGTAAT 133097 Query 131063 CGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCG 131122 |||| | ||||| || || | |||||| || || | || | ||| |||||||||| Sbjct 133098 CGCTTAAAGTGCGTCCATCTTCCAACTGCTTACCGGCAAAAATGAGACGTTGCTGGTCCG 133157 Query 131123 GAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACT 131182 |||| || ||||| ||||| |||||| ||||| | || | || || | | || Sbjct 133158 GAGGAATACCTTCCTTGTCTTGGATTTTGGTCTTGACATTATCGATCGTGTCCGACGGCT 133217 Query 131183 CGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 ||| ||| | |||| ||||| ||||| | |||||| ||||||||||| |||| Sbjct 133218 CGACGTCAAGCGTAATAGTTTTTCCGGTCAAAGTTTTGACGAAAATCTGAATGA 133271 >seq41 Length=265118 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||||||||| |||| || | ||| | || ||||||||||| ||||||||||| Sbjct 262725 GCCACCGCGCAATCGCAAAACGAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCT 262784 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| ||||| | |||||| || || | || | ||| ||||||||||| || Sbjct 262785 CAAAGTGCGTCCATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGCGG 262844 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| || || ||||| | || | || || | | ||||| Sbjct 262845 AATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTATCGATCGTGTCCGACGGCTCGAC 262904 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 |||| |||| ||||| ||||| | ||||| ||||||||||| |||| Sbjct 262905 ATCGAGCGTAATAGTTTTGCCGGTCAAGGTTTTGACGAAAATCTGAATGA 262954 >seq82 Length=265081 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||||||||| |||| || | ||| | || ||||||||||| ||||||||||| Sbjct 263005 GCCACCGCGCAATCGCAAGACAAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCT 263064 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| ||||| | |||||| || || | || | ||| |||||||||||||| Sbjct 263065 CAAAGTGCGTCCATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGAGG 263124 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| || || ||||| | || | || || | | ||||| Sbjct 263125 AATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTATCAATCGTGTCCGACGGCTCGAC 263184 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 |||| |||| ||||| || || | ||||| || |||||||| |||| Sbjct 263185 ATCGAGCGTAATAGTTTTTCCAGTCAAGGTTTTGACAAAAATCTGAATGA 263234 >seq2 Length=622807 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| ||||| || || || ||||| | |||||| || || ||||||||||| ||| | Sbjct 352848 CCACCACGCAATCGGAGAACCAAATGCAAGGTCGATTCTTTCTGAATGTTGTAGTCGGAC 352907 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || | ||| || || ||| | || |||||||| || |||||||| Sbjct 352908 AGTGTTCGACCATCTTCCAACTGTTTTCCGGCGAAAATCAAACGCTGTTGATCCGGAGGA 352967 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || ||||| | || | ||| || | | ||||| Sbjct 352968 ATTCCCTCCTTGTCCTGGATCTTGGTCTTGACATTATCGATAGTGTCAGACGGCTCGACA 353027 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| ||||| || | || |||||||| || ||||| Sbjct 353028 TCGAGCGTGATGGTCTTACCCGTCAAGGTCTTTACGAAGATTTGCAT 353074 >seq142 Length=241092 Score = 109 bits (120), Expect = 5e-19 Identities = 170/242 (70%), Gaps = 1/242 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| || || || | ||| || || |||||||| |||||||| ||| Sbjct 170317 CCACCTCGGAGACGCAAAACCAAGTGCAAGGTGGATTCTTTTTGAATATTGTAATCACTC 170376 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || | || || || ||| | || || || || || ||||| || Sbjct 170377 AAAGTACGTCCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGA 170436 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || ||||| | || | ||||| | | ||| | | Sbjct 170437 ATTCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTATCCGAAGGCTCAACG 170496 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA-CTTATTTTAT 131246 || | ||||| ||| ||||| || || || ||||||||||| ||||||| |||| ||| Sbjct 170497 TCCAGGGTAATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCATGATGCTATTCTAT 170556 Query 131247 TC 131248 || Sbjct 170557 TC 170558 >seq120 Length=609189 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| ||||| || || || ||||| | |||||| || || || |||||||||||| | Sbjct 562010 CCACCACGCAATCGGAGAACCAAATGCAAGGTCGATTCTTTCTGGATGTTGTAATCGGAC 561951 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || | ||| || || ||| | || | |||||| || |||||||| Sbjct 561950 AGTGTTCGACCATCTTCCAACTGTTTTCCGGCGAAAATCAGACGCTGTTGATCCGGAGGA 561891 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || ||||| | || | ||| || | | ||||| Sbjct 561890 ATTCCCTCCTTGTCCTGGATCTTGGTCTTGACATTATCGATAGTGTCAGACGGCTCGACA 561831 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| ||||| || | || |||||||| || ||||| Sbjct 561830 TCGAGCGTGATGGTCTTACCCGTCAAGGTCTTTACGAAGATTTGCAT 561784 >seq67 Length=439500 Score = 104 bits (114), Expect = 2e-17 Identities = 169/242 (70%), Gaps = 1/242 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| || || || | ||| || || || ||||| |||||||| ||| Sbjct 2843 CCACCTCGAAGACGCAAAACCAAGTGCAAGGTAGATTCTTTCTGAATATTGTAATCACTC 2902 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || | || || || ||| | || || || || || ||||| || Sbjct 2903 AACGTACGTCCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGA 2962 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || ||||| | || | || || | | ||| | | Sbjct 2963 ATTCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGGCTCAACG 3022 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA-CTTATTTTAT 131246 || | ||||| ||| ||||| || || || ||||||||||| ||||||| ||||| ||| Sbjct 3023 TCCAGGGTAATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCATGATGTTATTCTAT 3082 Query 131247 TC 131248 || Sbjct 3083 TC 3084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472011059452800