Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq41 127 1e-24 seq142 120 2e-22 seq291 118 7e-22 seq82 118 7e-22 seq232 116 2e-21 seq67 100 2e-16 seq226 86.0 4e-12 seq120 82.4 5e-11 >seq41 Length=265118 Score = 127 bits (140), Expect = 1e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | ||| ||||| || | ||| | ||| || |||||||||||||||||||| | Sbjct 262726 CCACCGCGCAATCGCAAAACGAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTC 262785 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 ||| ||| | || || || || ||||||||||| || || ||||| || || | || Sbjct 262786 AAAGTGCGTCCATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGCGGA 262845 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCAC-TTTCAAC 38269 | ||||| ||||| ||| || ||| ||||| | || || || | || || || Sbjct 262846 ATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTATCGATCGTGTC-CGACGGCTCGAC 262904 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | ||||||||||| || ||||||||||| ||||| ||||| ||| Sbjct 262905 ATCGAGCGTAATAGTTTTGCCGGTCAAGGTTTTGACGAAAATCTGAATG 262953 >seq142 Length=241092 Score = 120 bits (132), Expect = 2e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||||| | |||||| ||||| || | ||| || |||||||||||||||||| Sbjct 170316 ACCACCTCGGAGACGCAAAACCAAGTGCAAGGTGGATTCTTTTTGAATATTGTAATCACT 170375 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 |||| |||| | || || |||||||| ||||| || || | ||||||||||| | ||| Sbjct 170376 CAAAGTACGTCCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGG 170435 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 | || || ||||| || || ||| || || | || ||||| | ||||| Sbjct 170436 AATTCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTATCCGAAGGCTCAAC 170495 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | ||||| || |||||||||| || || ||||| || |||||| Sbjct 170496 GTCCAGGGTAATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCATG 170544 >seq291 Length=5215 Score = 118 bits (130), Expect = 7e-22 Identities = 83/95 (87%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||| |||||||||||||| ||||| || |||||| | Sbjct 966 AAGCCCGTTCCCTTGGCTGTGGGTTCGCTAGATAGTAATTAGGGACAGTGGGAATCTCAT 1025 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 1026 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 1060 >seq82 Length=265081 Score = 118 bits (130), Expect = 7e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | ||| ||||| || | ||| | ||| || |||||||||||||||||||| | Sbjct 263006 CCACCGCGCAATCGCAAGACAAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTC 263065 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 ||| ||| | || || || || ||||||||||| || || ||||| || || | || Sbjct 263066 AAAGTGCGTCCATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGAGGA 263125 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCAC-TTTCAAC 38269 | ||||| ||||| ||| || ||| ||||| | | || || | || || || Sbjct 263126 ATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTATCAATCGTGTC-CGACGGCTCGAC 263184 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | ||||||||||| || ||||||||||| || || ||||| ||| Sbjct 263185 ATCGAGCGTAATAGTTTTTCCAGTCAAGGTTTTGACAAAAATCTGAATG 263233 >seq232 Length=134552 Score = 116 bits (128), Expect = 2e-21 Identities = 167/233 (72%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 38087 ATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATC 38146 || |||||| | ||| |||| || | ||| | |||||| |||||||||||||||||||| Sbjct 133039 ATGACCACCGCGCAATCGCAGAACAAGATGCAAAGTGCTTTCCTTTTGAATATTGTAATC 133098 Query 38147 AGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGA 38206 ||| ||| | || || || || || |||||||| || || ||||| || || | Sbjct 133099 GCTTAAAGTGCGTCCATCTTCCAACTGCTTACCGGCAAAAATGAGACGTTGCTGGTCCGG 133158 Query 38207 GGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCAC-TTT 38265 || | ||||| ||||| ||||| ||| ||||| | || || || | || | Sbjct 133159 AGGAATACCTTCCTTGTCTTGGATTTTGGTCTTGACATTATCGATCGTGTC-CGACGGCT 133217 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 | || || | ||||||||||| || ||||| ||||| ||||| ||||| ||| Sbjct 133218 CGACGTCAAGCGTAATAGTTTTTCCGGTCAAAGTTTTGACGAAAATCTGAATG 133270 >seq67 Length=439500 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||||| | |||||| ||||| || | || || || ||||||||||||||| | Sbjct 2843 CCACCTCGAAGACGCAAAACCAAGTGCAAGGTAGATTCTTTCTGAATATTGTAATCACTC 2902 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || |||| | || || |||||||| ||||| || || | ||||||||||| | ||| Sbjct 2903 AACGTACGTCCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGA 2962 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCAC-TTTCAAC 38269 | || || ||||| || || ||| || || | || || || | || ||||| Sbjct 2963 ATTCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTC-CGACGGCTCAAC 3021 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || | ||||| || |||||||||| || || ||||| || |||||| Sbjct 3022 GTCCAGGGTAATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCATG 3070 >seq226 Length=603765 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | |||||||||||| |||||||| |||||| || || ||||| || | Sbjct 85626 CCACCGCGGAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 85685 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || || |||| || | || ||||||||||| || | || |||||||| | || Sbjct 85686 AACGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGA 85745 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||| |||||| || || ||| || || | || || || ||||| Sbjct 85746 ATTCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACA 85805 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | || || || || || ||||| || || ||||| |||||||| Sbjct 85806 TCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 85852 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| || | | |||||||||||| |||||||| |||||| || || ||||| || Sbjct 85852 TACCTCCGCGGAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGC 85911 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| || |||| || | || ||||||||||| || | || |||||||| | | Sbjct 85912 TCAACGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCG 85971 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||| |||||| || || ||| || || | || || || |||| Sbjct 85972 GAATTCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAA 86031 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | || || || || || ||||| || || ||||| |||||||| Sbjct 86032 CATCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 86080 >seq120 Length=609189 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | ||| || | |||||||| | || || || || || |||||||| || Sbjct 562011 ACCACCACGCAATCGGAGAACCAAATGCAAGGTCGATTCTTTCTGGATGTTGTAATCGGA 561952 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 || || | || || || ||||||||||| || || || || |||||||| | || Sbjct 561951 CAGTGTTCGACCATCTTCCAACTGTTTTCCGGCGAAAATCAGACGCTGTTGATCCGGAGG 561892 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 | || || |||||| || || ||| ||||| | || ||| || || || Sbjct 561891 AATTCCCTCCTTGTCCTGGATCTTGGTCTTGACATTATCGATAGTGTCAGACGGCTCGAC 561832 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | || || || |||||||||||||| || ||||| || ||||| Sbjct 561831 ATCGAGCGTGATGGTCTTACCCGTCAAGGTCTTTACGAAGATTTGCAT 561784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334945995760145