Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq98 217 2e-51 seq194 188 9e-43 seq2 132 6e-26 seq120 131 2e-25 seq103 111 2e-19 seq208 87.8 2e-12 >seq98 Length=427084 Score = 217 bits (240), Expect = 2e-51 Identities = 387/557 (69%), Gaps = 7/557 (1%) Strand=Plus/Plus Query 32660 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 32719 ||| || ||||| || || ||||| ||||| | |||||| |||||||||||||| || Sbjct 135036 ACAGGCAAAATCACAATGCAGACCTTCGTCGCGACTAATCAATTCGTTGGAAAAGCAAAG 135095 Query 32720 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 32779 |||||||| || || || || || |||||||| |||| ||| || || |||||||| Sbjct 135096 ACCGGGCATGAGACCCCGTTTCTTGAGCCAAAAAATGGCACAAAAGGAACCGGAAAAGAA 135155 Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGT-CATGTA 32838 ||| ||||| || ||||||||||| | | | || || | ||| ||| | || Sbjct 135156 AATGCCTTCGACGGCCGCAAAGGCGACACAGCGTTCCGCAAAGGAAGCGTTGTTCGCGTC 135215 Query 32839 TCCACTTTTGA--GCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 32896 | | || | ||||||| ||||||||||| |||||| || | || || || || Sbjct 135216 ACACCATTGCAAGGCCCAATGGGCCTTCTTTTGTACACACGGAACCGTATCAATGGCCCG 135275 Query 32897 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 32956 || | || | || || || ||| || || ||||||||||||||| ||| | Sbjct 135276 CAACAAATGATCCTTCTCTTTCGGATCGCGAATGTACGTATCAATCAAAAGAGAATAGGT 135335 Query 32957 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCT-CGGTAA 33015 ||| ||||||||||| | ||| ||||| |||||||| || || | || | ||| | Sbjct 135336 TTCGCTGTGAATGTTTTCGACGGCAATTTGGAATCCGTAAAAACAACGGGCTTCCGGCGA 135395 Query 33016 TCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 33075 | || | ||| |||||||| || ||| |||||||||||||| || ||||| || | Sbjct 135396 T-TGAATTTCGGTACAAAAGTTTTGTGCCAAATTTTCATTCACAATGCCGTCGGACGCGG 135454 Query 33076 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGT-GTTAGTTTATTCCAA 33134 |||| |||||||| || || | ||| | ||||| || | | | | |||||| Sbjct 135455 CAAAGAACGCCAACACGTGCGACACAAAGTGACGTTCGT-TGCTCGACAAATGTTTCCAA 135513 Query 33135 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 33194 || | | ||| | | | ||| | |||||| | |||||||| || || || || ||| Sbjct 135514 TCTTGCAAATCACTGGCGAGATCAATTTCTTCGGCCGTCCAAAAGGAAGCTTCGGCTTTT 135573 Query 33195 TTATACATATTCCAGAT 33211 || ||||| | |||||| Sbjct 135574 TTGTACATTTGCCAGAT 135590 >seq194 Length=282305 Score = 188 bits (208), Expect = 9e-43 Identities = 388/566 (69%), Gaps = 11/566 (2%) Strand=Plus/Plus Query 32653 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 32712 ||| |||||| || ||||| || || ||||| ||||| | ||| || ||||| ||||||| Sbjct 115790 ACAACAAACAGGCAAAATCACAATGCAGACCTTCGTCGCGACTGATCAATTCATTGGAAA 115849 Query 32713 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCA 32771 | ||| |||||||| || || || || || ||||| || |||| | || || || || Sbjct 115850 AGCAGAGACCGGGCATAAGACCCCGTTTCTTGAGCCAGAAAATGG-CACAGAACGAGCCG 115908 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC---G 32828 ||||||||||| ||||| || |||||||| || | | || || | || | Sbjct 115909 GAAAAGAAAATGCCTTCGACGGCCGCAAATGCGACGCAACGTTCGGCAAAGGAAGCATGG 115968 Query 32829 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 32888 || | | ||| | ||||| | ||||||||||| |||||| || | || || Sbjct 115969 TTGGCGTCACACCATTGCAAGGCCCAGTTGGCCTTCTTTTGTACACACGGGACCGTATCA 116028 Query 32889 ATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGA 32948 || || || | || | |||||| || || || || |||||||| | | | Sbjct 116029 ATGGCCCGCAACAAATGATCTTTTTCCTTGGGGTCACGAATGTAGGTATCAATGAGTA-A 116087 Query 32949 CTA-TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGC 33007 | | ||| | || |||||||||||| | ||| ||||| ||||| || || || | || Sbjct 116088 CGAGTACGTCTCACTATGAATGTTTTCGACGGCAATTTGGAATCCATAAAAACAGCGGGC 116147 Query 33008 CTC-GGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGT 33066 || ||| || || | ||| |||||||| || || |||||||||||||| || |||| Sbjct 116148 TTCTGGTGAT-TGAATTTCGGTACAAAAGTTTTGCGCCAAATTTTCATTCACAATACCGT 116206 Query 33067 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGT-GTTAGT 33125 | ||| ||||| |||||||| || ||| | ||| | | ||||| || | | | Sbjct 116207 CCGAGGCGGCAAAGAACGCCAAAACGTGTGACACAAAGTGTCGTTCGT-TGCTGGACAAA 116265 Query 33126 TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCC 33185 || |||||||| | | ||| | | | ||| | |||||| | ||||| || || || Sbjct 116266 TTCTTCCAATCTTGCAAATCACTGGCCAAATCAATTTCTTCGGCCGTCCAGAAAGAAGCT 116325 Query 33186 TCTGCCTTTTTATACATATTCCAGAT 33211 || || ||||| ||||| | |||||| Sbjct 116326 TCGGCTTTTTTGTACATTTGCCAGAT 116351 >seq2 Length=622807 Score = 132 bits (146), Expect = 6e-26 Identities = 325/482 (67%), Gaps = 12/482 (2%) Strand=Plus/Plus Query 62801 ATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTG 62860 || || |||||||||||||| |||| ||||||||| | ||| | || |||||||| || Sbjct 349360 ATTTCCGTGCAAAGATTACTGCACTGGATGGTTCCAAGATTCTTCTGGTTACTCTTCGTG 349419 Query 62861 TTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATC 62920 || |||| |||||| || | ||| |||| ||||| ||||| || ||||| |||| || Sbjct 349420 TTGCACGAATCCTTGTACAACATGTATGGCGTACCTGTTTCGATTTGAGACTCTAATATG 349479 Query 62921 GCTTTCCAGACGACTCGAGCCTTTATT--ATAGATTTGTATCTCTTTTCTCTTTCGTAT- 62977 || |||| | | || || | ||| | || | | ||| ||||||||| Sbjct 349480 GCACTCCAAAGTTCGCGTGCTCTGATTTGCTTGA--CAAAGCGACCTTCCCTTTCGTATC 349537 Query 62978 -AGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATT-GTCCAGTCCAGGACATTCAT 63035 ||||| | || ||| || || || || | || | | ||||| |||| Sbjct 349538 CCTCGTATA-ACTC-TTCAAATGCG-CTGCCGTACTGTTCGGGTAAACCAGGGCATTGTC 349594 Query 63036 CCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAA 63095 || ||||||| |||| ||| || |||| || ||||||||||| ||||| |||| Sbjct 349595 GAGGGCACATCAGACTCCACATTCCATCTTCCTCAACACGTTTCATAAACAGATCGGGAA 349654 Query 63096 TCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA 63154 ||||||| || ||| || | |||| | | ||| || || ||||| ||| || || Sbjct 349655 TCCAAAGCGC-ATAGAACAAGTCTCGTGCCCGATGCTCTTCTTTTCCGTGATTTTTCTTG 349713 Query 63155 AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCA 63214 |||| | | | | |||||||||||||| ||||||| ||| | || | | |||| Sbjct 349714 AGATTCAACACATCAAAGATATCAGAATGCCATGGTTCCAGGTAGACAGCAAAAGCTCCC 349773 Query 63215 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 63274 ||||| ||| || ||||| || | ||| | | || || ||||||| | |||| Sbjct 349774 GGCCGCTTGCCCCCGCCCTGGTCAACGTAACGACTCGTAGCATCGTAAACTCGGAGCATT 349833 Query 63275 GG 63276 || Sbjct 349834 GG 349835 >seq120 Length=609189 Score = 131 bits (144), Expect = 2e-25 Identities = 438/672 (65%), Gaps = 20/672 (3%) Strand=Plus/Minus Query 62749 AACAGAT----GCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCT 62804 ||||||| || || || ||||| ||||| || | | | | ||| || | || | Sbjct 565500 AACAGATACTAGCAAGGTTGCAAACAGCTACTTCCTCTGGACTTGTATACTGGACAATTT 565441 Query 62805 CAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTAC 62864 | ||||| |||||||| |||| || ||||||| ||| | || ||||| || |||| | Sbjct 565440 CCGTGCAGAGATTACTGCACTGAATCGTTCCTAGATTCTTCTGGTTACTTTTCGTGTTGC 565381 Query 62865 ACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTT 62924 |||||||||| || | || |||| ||||| || || || ||||| | || || || Sbjct 565380 ACGCATCCTTGTACAACATATATGGCGTACCCGTCTCGATTTGAGACTGTAATATGGCAC 565321 Query 62925 TCCAGACGACTCGAGCCTTTATTATAGATTT--GTATCTCTTTTCTCTTTCGTATAGT-- 62980 |||| | | || || | ||| | || | | | ||| ||||| ||| Sbjct 565320 TCCAAAGTTCGCGTGCTCTGATTT--GTTTGACGAAGCGACCTTCCCTTTCATATCTCTC 565263 Query 62981 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGT---CCAGGACATTCATCC 63037 ||||| | | || || || ||||| | | || || ||||| |||| Sbjct 565262 GTATAACACC--TCAAAAGCG-CTCCCGTAC--TGCTCGGGTAACCCAGGGCATTGTCGA 565208 Query 63038 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63097 || ||||||| |||| |||| || || | || ||||||||||| ||||| |||||| Sbjct 565207 GGGCACATCAGACTCCACACTCCATCTTCTTCGACACGTTTCATAAACAGATCCGGAATC 565148 Query 63098 CAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 63156 ||||| || ||| || | |||| | | ||| || || ||||| ||| || || || Sbjct 565147 CAAAGCGC-ATAGAACAAGTCTCGTGCCCGATGCTCTTCTTTTCCGTGATTTTTCTTGAG 565089 Query 63157 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 63216 || | | | | |||||||||||||||||||||| ||| | || | | |||| || Sbjct 565088 ATTTAATACATCAAATATATCAGAATGCCACGGTTCCAGGTAGACAGCAAAAGCTCCCGG 565029 Query 63217 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63276 ||| ||| ||||||||| || | ||| | | ||| | ||||||| | ||| || Sbjct 565028 CCGCTTGCCTCCTCCCTGGTCAACGTAACGACTTGTGGCGTCGTAAACTCGAAGCATGGG 564969 Query 63277 AATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATT 63336 | | ||||| || || || || || |||| | ||| || ||||| Sbjct 564968 CACCAAGCCATTCGAAACTCCGCGTGTACCACGAATCGGTGTTCCTCGGGCTCGGATATT 564909 Query 63337 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 63396 || |||| || ||||| ||||| ||| || |||| || |||| ||| | || Sbjct 564908 GTGAACAGATAAGCCAATTCCTCCTGCTGATTTCGAAATTACCGCACATCTTTTGAGGGT 564849 Query 63397 ATCATAGATGCC 63408 |||||||| || Sbjct 564848 GTCATAGATCCC 564837 >seq103 Length=133562 Score = 111 bits (122), Expect = 2e-19 Identities = 367/567 (65%), Gaps = 14/567 (2%) Strand=Plus/Minus Query 32673 CAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGG 32732 ||||| | || || || | |||||| | ||| ||| ||||| | ||||||||| || Sbjct 27643 CAGTGCAATCCTTCATCACGACTAATGAGTTCATTGCTGAACGTCAATCCGGGCATGAGT 27584 Query 32733 CCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACT 32792 || || || || |||||||| |||| ||| | || |||||||| || ||||| || Sbjct 27583 CCCCGTTTCTTGAGCCAAAAAATGGCACAAAAGGCGCCCGAAAAGAAGATGCCTTCCACG 27524 Query 32793 GCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTC------ATGTATCCACTTT 32846 ||||||||||| | | || ||| || | | |||| | ||||||| | Sbjct 27523 GCCGCAAAGGCCACCAATCGCTCCGCAAAG--GACGCTTCCGAACCAATGTATCG----T 27470 Query 32847 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATA-GCATTAAAGAGATA 32905 || ||||| |||| ||| |||| || | | || ||| || |||||| Sbjct 27469 TGCGCCCACGCGGCTTTCCGACGGACACTGGGGACTTTCG-TATGCGCCGCAAAGAGGAC 27411 Query 32906 GtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATG 32965 | | || || ||| || ||||||||||| |||| || |||| ||| Sbjct 27410 TTGTCGATCGGAGGGATTGGTAATGTACGTATCAATCAACAGACAGTAGGTTTCTTGATG 27351 Query 32966 AATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTC 33025 |||| |||| ||||||||||| ||||| || || || | || || | || | ||||| Sbjct 27350 AATGCTTTCCATGGCCATTTGGAATCCATAAAAACAACGCGCTTCCGGAACCGTCACTTC 27291 Query 33026 TGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 33085 |||||| ||||| || |||||||| ||| || || || | | ||||| || || Sbjct 27290 CCGACAAAAGCGTTCCGCCAAATTTTCTACCACAATCCCATCGGCGCCGGCAAAGAAGGC 27231 Query 33086 CAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATC 33145 ||| || | || |||| | |||| | || | | |||||| ||| ||| Sbjct 27230 CAAGACCATACTGATGAAATGTCGTTCGGACGTGGTCAACGACTGCCAATCGGTGACATC 27171 Query 33146 TTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATT 33205 || | | ||| | ||| || | |||||||| || ||| | | || ||||| || Sbjct 27170 TTGACTGAGATCAATTTCGTCGGCCGTCCAAAAGGAAGCCACGTGTTGCTTGTACATGTT 27111 Query 33206 CCAGATGTCATGATATTGAATTGGAAA 33232 ||| | ||| | |||||| ||||| Sbjct 27110 CCACAGGTCGGCGTGTTGAATGGGAAA 27084 >seq208 Length=180812 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 32673 CAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGG 32732 ||||| || || || || | |||||| | ||| || |||||| | |||||||| || Sbjct 73044 CAGTGCAGTCCTTCATCGCGACTAATGAGTTCATTACTAAACGTCAAACCGGGCATCAGC 72985 Query 32733 CCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACT 32792 || || || || |||||||| |||| ||| | ||| |||||||| || ||||| || Sbjct 72984 CCTCGTTTCTTGAGCCAAAAGATGGCACAAAAAGCTCCCGAAAAGAAGATCCCTTCCACG 72925 Query 32793 GCCGCAAAGGC 32803 ||||||||||| Sbjct 72924 GCCGCAAAGGC 72914 Score = 86.0 bits (94), Expect = 8e-12 Identities = 200/302 (66%), Gaps = 0/302 (0%) Strand=Plus/Minus Query 32931 TATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAAT 32990 || |||||||| | ||||| || |||| ||||||| |||| ||||||||||| ||| Sbjct 72786 TACGTATCAATAAGAAGACAGTAGGTTTCTTGATGAATGCTTTCCATGGCCATTTGGAAT 72727 Query 32991 CCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTT 33050 || || || || | || || | | | ||||| |||||||||||| || |||||| Sbjct 72726 CCATAAAAACAGCGGGCTTCCGGGACCGTCACTTCCCGACAAAATCGTTCCGCCAAATTT 72667 Query 33051 TCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTT 33110 || ||| || || || | ||||| || ||||| || | || |||| | | Sbjct 72666 TCCACCACAATACCATCGGCACCAGCAAAGAAGGCCAAGACCATACTGATGAAATGTCGT 72607 Query 33111 TCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACT 33170 ||| || |||| | |||||| | | ||| | | | ||| | ||| || | Sbjct 72606 TCGGATGACGTTAAGGATTGCCAATCGGTAACATCCTGACTGAGATCAATTTCGTCGGCC 72547 Query 33171 GTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGA 33230 |||||||| || ||| | | || ||||| ||||| | || || |||||| ||| Sbjct 72546 GTCCAAAACGAAGCCACGTGTTGCTTGTACATGTTCCACAAATCGGCATGTTGAATGGGA 72487 Query 33231 AA 33232 || Sbjct 72486 AA 72485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633629663482000