Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq98 161 1e-34 seq194 129 7e-25 seq208 120 3e-22 seq103 109 6e-19 >seq98 Length=427084 Score = 161 bits (178), Expect = 1e-34 Identities = 379/567 (67%), Gaps = 4/567 (1%) Strand=Plus/Plus Query 93081 TGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGC 93140 |||||| || || ||||| || ||| | ||||||||| || ||||| || ||| Sbjct 135026 TGTACAGTAGACAGGCAAAATCACAATGCAGACCTTCGTCGCGACTAATCAATTCGTTGG 135085 Query 93141 TGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTAC 93200 || | ||| || | || || ||||||||||||||||| || | | ||| || Sbjct 135086 AAAAGCAAAGACCGGGCATGAGACCCCGTTTCTTGAGCCAAAAAATGGCACAAAAGGAAC 135145 Query 93201 CAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGG 93260 | ||||| || || ||||| ||||| ||||| || ||| ||||| ||||| ||| Sbjct 135146 CGGAAAAGAAAATGCCTTCGACGGCCGCAAAGGCGACACAGCGTTCCGCAAAGGAAGCGT 135205 Query 93261 AATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTT 93320 || | ||||| || ||||||| ||| || || | | ||| || | || | Sbjct 135206 TGTTCGCGTCACACCATTGCAAGGCCCAATGGGCCTTCTTTTGTACACACGGAACCGTAT 135265 Query 93321 CGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACA 93380 | || || || | | ||| ||| | || ||| || ||||| ||||| || || | Sbjct 135266 CAATGGCCCGCAACAAATGATCCTTCTCTTTCGGATCGCGAATGTACGTATCAATCAAAA 135325 Query 93381 GAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAG 93440 ||||||| |||| || | || || | ||||||||||||||||| ||||| | | Sbjct 135326 GAGAATAGGTTTCGCTGTGAATGTTTTCGACGGCAATTTGGAATCCGTAAAAACAACGGG 135385 Query 93441 CTTCC-GTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCA 93499 ||||| | ||| || | ||| | |||| | | | | | ||||||||| || || || Sbjct 135386 CTTCCGGCGAT-TGAATTTCGGTACAAAAGTTTTGTGCCAAATTTTCATTCACAATGCCG 135444 Query 93500 TCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTA-AG 93558 ||||| || ||||| || ||||| | ||| | ||| || || | || | | Sbjct 135445 TCGGACGCGGCAAAGAACGCCAACACGTGCGACACAAAGTGACGTTCGT-TGCTCGACAA 135503 Query 93559 CTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGC 93618 | | |||||| | ||| | | ||||| | ||||||| | |||||||| || || Sbjct 135504 ATGTTTCCAATCTTGCAAATCACTGGCGAGATCAATTTCTTCGGCCGTCCAAAAGGAAGC 135563 Query 93619 TTCTGCTTTTTTGTACATATCCCATAT 93645 ||| |||||||||||||| | ||| || Sbjct 135564 TTCGGCTTTTTTGTACATTTGCCAGAT 135590 >seq194 Length=282305 Score = 129 bits (142), Expect = 7e-25 Identities = 374/568 (66%), Gaps = 6/568 (1%) Strand=Plus/Plus Query 93081 TGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGC 93140 |||||| || || ||||| || ||| | ||||||||| || ||||| |||||| Sbjct 115787 TGTACAACAAACAGGCAAAATCACAATGCAGACCTTCGTCGCGACTGATCAATTCATTGG 115846 Query 93141 TGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA- 93199 || | ||| || | || || |||||||||||||| || || | | || ||| | Sbjct 115847 AAAAGCAGAGACCGGGCATAAGACCCCGTTTCTTGAGCCAGAAAATGGCA-CAGAACGAG 115905 Query 93200 CCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCG 93259 || ||||| || || ||||| ||||| |||||||| || |||||||||||| || Sbjct 115906 CCGGAAAAGAAAATGCCTTCGACGGCCGCAAATGCGACGCAACGTTCGGCAAAGGAAGCA 115965 Query 93260 GAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT 93319 || | ||||| || ||||| | ||| || || | | ||| || | || Sbjct 115966 TGGTTGGCGTCACACCATTGCAAGGCCCAGTTGGCCTTCTTTTGTACACACGGGACCGTA 116025 Query 93320 TCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAAC 93379 || || || || | | |||| || | | || || ||||| ||||| || | Sbjct 116026 TCAATGGCCCGCAACAAATGATCTTTTTCCTTGGGGTCACGAATGTAGGTATCAATGAGT 116085 Query 93380 AGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTA 93439 | || ||| | ||| ||| | || || | |||||||||||||| || ||||| | Sbjct 116086 AACGAGTACGTCTCACTATGAATGTTTTCGACGGCAATTTGGAATCCATAAAAACAGCGG 116145 Query 93440 GCTTC-CGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACC 93498 ||||| ||||| || | ||| | |||| | | | | ||||||||| || ||||| Sbjct 116146 GCTTCTGGTGAT-TGAATTTCGGTACAAAAGTTTTGCGCCAAATTTTCATTCACAATACC 116204 Query 93499 ATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTA-A 93557 || || || ||||| || ||||| | || | ||| ||| || | || | | Sbjct 116205 GTCCGAGGCGGCAAAGAACGCCAAAACGTGTGACACAAAGTGTCGTTCGT-TGCTGGACA 116263 Query 93558 GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATG 93617 || | |||||| | ||| | | | ||| | ||||||| | ||||| || || | Sbjct 116264 AATTCTTCCAATCTTGCAAATCACTGGCCAAATCAATTTCTTCGGCCGTCCAGAAAGAAG 116323 Query 93618 CTTCTGCTTTTTTGTACATATCCCATAT 93645 |||| |||||||||||||| | ||| || Sbjct 116324 CTTCGGCTTTTTTGTACATTTGCCAGAT 116351 >seq208 Length=180812 Score = 120 bits (132), Expect = 3e-22 Identities = 360/545 (66%), Gaps = 27/545 (5%) Strand=Plus/Minus Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193 ||||| || || || ||||| || | ||| |||||||||||||||||||| || | | | Sbjct 73014 TCATTACTAAACGTCAAACCGGGCATCAGCCCTCGTTTCTTGAGCCAAAAGATGGCACAA 72955 Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAA 93253 ||| || ||||| || || ||||||||||| ||||| ||||| | ||||| ||||| Sbjct 72954 AAAGCTCCCGAAAAGAAGATCCCTTCCACGGCCGCAAAGGCCACCAACCGTTCCGCAAA- 72896 Query 93254 TTTGCGGAATTACTGCTGATCCATTTTA-----AAGCCCAATCGGCTTTTTTCTTAATAC 93308 ||| || | || ||| | || ||||| | ||||| | || Sbjct 72895 -----GGA--GGCTTCCGAACCAATATACCGCTGTGCCCAGGCCGCTTTCCGACGGACAC 72843 Query 93309 AAGGTAGTGTTTCGATA---GCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGT-ATG 93364 |||| || | || || ||| || | ||| ||| | || | || ||| Sbjct 72842 TGGGTA---CTTGGGTATGCGCCGCAAAGAGTACTTGTCGATCGGATGGAT-TGGTAATG 72787 Query 93365 TATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAAT 93424 || ||||| || | ||| | || |||| ||| | | ||||| || ||||||||| Sbjct 72786 TACGTATCAATAAGAAGACAGTAGGTTTCTTGATGAATGCTTTCCATGGCCATTTGGAAT 72727 Query 93425 CCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTT 93484 || || ||||| | ||||||| || | |||||| || |||||| || | | |||| Sbjct 72726 CCATAAAAACAGCGGGCTTCCGGGACCGTCACTTCCCGACAAAATCGTTCCGCCAAATTT 72667 Query 93485 TCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATA-TATGCTTTATAAAATGT-- 93541 || || |||||||||| | ||||| || ||||| | || | | || |||||| Sbjct 72666 TCCACCACAATACCATCGGCACCAGCAAAGAAGGCCAAGACCATAC-TGATGAAATGTCG 72608 Query 93542 TTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCG 93601 ||| || | | ||||| | | |||||||| | ||| | ||||| | ||| ||| Sbjct 72607 TTCGGATGA-CGTTAAGGAT-TGCCAATCGGTAACATCCTGACTGAGATCAATTTCGTCG 72550 Query 93602 ACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATT 93661 | ||||||||||| || | || |||||||| | ||| | || || |||||| Sbjct 72549 GCCGTCCAAAACGAAGCCACGTGTTGCTTGTACATGTTCCACAAATCGGCATGTTGAATG 72490 Query 93662 GGAAA 93666 ||||| Sbjct 72489 GGAAA 72485 >seq103 Length=133562 Score = 109 bits (120), Expect = 6e-19 Identities = 577/902 (64%), Gaps = 51/902 (6%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 ||| ||||||| |||||||||||||| ||| ||||||||| || || |||||||| || Sbjct 27959 CATGACACCACTCTTTTGGTATTCCCCGACTCGTTTTTCAAAAAAGTTCGTCTTTCCCTC 27900 Query 92850 CAAAGATATCGAATTCA--CTAGTGATTGGATTCTTGGCGTTATAATACTTTTCACCG-A 92906 |||| ||| || || | | || |||||| ||| | || || | | | Sbjct 27899 CAAACTGATCATATCCATCCAATCGAATGGATTGC--GCGATCCAA-ACAAGGGTCGGTA 27843 Query 92907 TC--AACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACA 92964 || || || | ||| || | ||| || |||||||| |||||||| ||||| | | Sbjct 27842 TCCCAAATCATGCAACAACCGATCGGCCACAAATTCAATGTACTGCGACATGAGACTGGC 27783 Query 92965 ATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAAC 93024 ||||| || | | || || || | || ||| || ||| |||| |||| | | || Sbjct 27782 GTTCATGCCAATCAAACTCACGGGCAAGGCCTCGCACACGAAGCCTTTTTCGACTTCGAC 27723 Query 93025 GGCTTCTT---TCAAG------ATTTCTATTACTCTACTATTTGGTGGTTTTTGTACGAC 93075 |||||| ||| | || || | | | || ||||| || | | Sbjct 27722 GGCTTCGGCAATCACGGCATGAATGTCGCGTTC-CGACAATTTGC--------GTTCCAA 27672 Query 93076 ATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTC 93135 | | ||||| ||| ||||| || || ||||| || || || | || Sbjct 27671 CTTTTGGTACAGCTGGCAGGCAAACGAACAGTGCAATCCTTCATCACGACTAATGAGTTC 27612 Query 93136 ATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAA 93195 ||||||||| || || || || | ||||| ||||||||||||||||| || | | ||| Sbjct 27611 ATTGCTGAACGTCAATCCGGGCATGAGTCCCCGTTTCTTGAGCCAAAAAATGGCACAAAA 27552 Query 93196 ACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATT 93255 || ||||| || || ||||||||||| ||||| ||||| | || || ||||| Sbjct 27551 GGCGCCCGAAAAGAAGATGCCTTCCACGGCCGCAAAGGCCACCAATCGCTCCGCAAA--- 27495 Query 93256 TGCGGAATTACTGCTGATCCATTTTA-----AAGCCCAATCGGCTTTTTTCTTAATACAA 93310 ||| || | || ||| | || ||||| |||| ||| | ||| Sbjct 27494 ---GGA--CGCTTCCGAACCAATGTATCGTTGCGCCCACGCGGC--TTTCCGACGGACAC 27442 Query 93311 GGTAGTGTTTCG-AT-AGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGT-ATGTAT 93367 | | ||||| || || ||| ||| | ||| ||| | || | || ||||| Sbjct 27441 TGGGGACTTTCGTATGCGCCGCAAAGAGGACTTGTCGATCGGAGGGAT-TGGTAATGTAC 27383 Query 93368 GTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCG 93427 ||||| || |||||| | || |||| ||| | | ||||| || ||||||||||| Sbjct 27382 GTATCAATCAACAGACAGTAGGTTTCTTGATGAATGCTTTCCATGGCCATTTGGAATCCA 27323 Query 93428 TAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCA 93487 || ||||| | ||||||| | | |||||| || |||| | || | | |||||| Sbjct 27322 TAAAAACAACGCGCTTCCGGAACCGTCACTTCCCGACAAAAGCGTTCCGCCAAATTTTCT 27263 Query 93488 TTGACTATACCATCGGATGCTGCaaaaaaaGCCAATA-TATGCTTTATAAAATGT--TTC 93544 || || ||||||| | ||||| || ||||| | || | | || |||||| ||| Sbjct 27262 ACCACAATCCCATCGGCGCCGGCAAAGAAGGCCAAGACCATAC-TGATGAAATGTCGTTC 27204 Query 93545 TCATCATCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACA 93604 | | | | || | | |||||||| | ||||| ||||| | ||| ||| | Sbjct 27203 GGA-CGTGGTCAA-CGACTGCCAATCGGTGACATCTTGACTGAGATCAATTTCGTCGGCC 27146 Query 93605 GTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGA 93664 |||||||| || || | || |||||||| | ||| | ||| | |||||| ||| Sbjct 27145 GTCCAAAAGGAAGCCACGTGTTGCTTGTACATGTTCCACAGGTCGGCGTGTTGAATGGGA 27086 Query 93665 AA 93666 || Sbjct 27085 AA 27084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556858746575800