Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq2 156 4e-33 seq232 145 6e-30 seq120 141 8e-29 seq41 140 3e-28 seq82 134 1e-26 seq142 123 2e-23 seq67 109 5e-19 seq168 102 7e-17 seq10 84.2 2e-11 >seq2 Length=622807 Score = 156 bits (172), Expect = 4e-33 Identities = 241/340 (71%), Gaps = 12/340 (4%) Strand=Plus/Plus Query 129737 TGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGAT 129796 |||||| ||||||||| | ||| | |||||| | ||||| || | || ||| || | Sbjct 349349 TGTACTGGACAATTTCCGTGCAAAGATTACTGCACTGGATGGTTCCAAGATTCTTCTGGT 349408 Query 129797 TACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGCG 129856 |||| ||| ||||||| | ||| ||||||| |||||| ||||| || ||||||| ||| | Sbjct 349409 TACTCTTCGTGTTGCACGAATCCTTGTACAACATGTATGGCGTACCTGTTTCGATTTGAG 349468 Query 129857 TTTCGACAATGGTCCTGAACAAGTCTCGAGCCTTGATCTGTCTTACAAATTTGCCACATT 129916 || | |||| || | | || || || |||| || | ||||| || || || Sbjct 349469 ACTCTAATATGGCACTCCAAAGTTCGCGTGCTCTGATTTGCTTGACAAA---GCGACCTT 349525 Query 129917 TC---TCGTATGCCACATACAGTTGTTCAAATTCTGAGCCGTGTACGGTGTCGAGCAAC- 129972 | |||||| || | || | | ||||||| | ||||| || || ||| | || Sbjct 349526 CCCTTTCGTATCCCTCGTATAACTCTTCAAATGCGCTGCCGT--ACTGT-TCGGGTAAAC 349582 Query 129973 --GGCGATTCACGCGGACACATCAAACTCCACATTCCATCCGCTTCGACTCGTTTCATAA 130030 || ||| || || ||||||| ||||||||||||||| | || || |||||||||| Sbjct 349583 CAGGGCATTGTCGAGGGCACATCAGACTCCACATTCCATCTTCCTCAACACGTTTCATAA 349642 Query 130031 ACAAATCGGGTACCCACAGGGCGTACAACAAATCTCGCGC 130070 ||| |||||| | ||| || || || ||||| ||||| || Sbjct 349643 ACAGATCGGGAATCCAAAGCGCATAGAACAAGTCTCGTGC 349682 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || || || ||||| || |||| || || || || | | Sbjct 353074 ATGCAAATCTTCGTAAAGACCTTGACGGGTAAGACCATCACGCTCGATGTCGAGCCGTCT 353015 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| || || || ||||||||||| ||||| || |||||| Sbjct 353014 GACACTATCGATAATGTCAAGACCAAGATCCAGGACAAGGAGGGAATTCCTCCGGATCAA 352955 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || || ||||| |||||||| || ||| || || | ||||| |||||| Sbjct 352954 CAGCGTTTGATTTTCGCCGGAAAACAGTTGGAAGATGGTCGAACACTGTCCGACTACAAC 352895 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| |||||||| ||| | ||||| ||| | |||||||| || ||| Sbjct 352894 ATTCAGAAAGAATCGACCTTGCATTTGGTTCTCCGATTGCGTGGTGGT 352847 >seq232 Length=134552 Score = 145 bits (160), Expect = 6e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 || || ||||| || |||||||| ||||| ||||| | || ||||| || || | | Sbjct 133269 ATTCAGATTTTCGTCAAAACTTTGACCGGAAAAACTATTACGCTTGACGTCGAGCCGTCG 133210 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| ||||| ||||||||||| |||||||| || || || Sbjct 133209 GACACGATCGATAATGTCAAGACCAAAATCCAAGACAAGGAAGGTATTCCTCCGGACCAG 133150 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || |||||||| || ||||| || ||| ||||| | ||||||||| Sbjct 133149 CAACGTCTCATTTTTGCCGGTAAGCAGTTGGAAGATGGACGCACTTTAAGCGATTACAAT 133090 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| ||| ||| | ||| | ||| ||||||||||||| ||| Sbjct 133089 ATTCAAAAGGAAAGCACTTTGCATCTTGTTCTGCGATTGCGCGGTGGT 133042 >seq120 Length=609189 Score = 141 bits (156), Expect = 8e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || || || ||||| || |||| || || || || | | Sbjct 561784 ATGCAAATCTTCGTAAAGACCTTGACGGGTAAGACCATCACGCTCGATGTCGAGCCGTCT 561843 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| || || || ||||||||||| ||||| || |||||| Sbjct 561844 GACACTATCGATAATGTCAAGACCAAGATCCAGGACAAGGAGGGAATTCCTCCGGATCAA 561903 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || ||||| |||||||| || ||| || || | |||||||||||| Sbjct 561904 CAGCGTCTGATTTTCGCCGGAAAACAGTTGGAAGATGGTCGAACACTGTCCGATTACAAC 561963 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || |||||||| ||| | ||||| ||| | |||||||| || ||| Sbjct 561964 ATCCAGAAAGAATCGACCTTGCATTTGGTTCTCCGATTGCGTGGTGGT 562011 Score = 125 bits (138), Expect = 6e-24 Identities = 233/338 (69%), Gaps = 12/338 (4%) Strand=Plus/Minus Query 129739 TACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTA 129798 |||| ||||||||| | ||| | |||||| | ||| || || | || ||| || ||| Sbjct 565453 TACTGGACAATTTCCGTGCAGAGATTACTGCACTGAATCGTTCCTAGATTCTTCTGGTTA 565394 Query 129799 CTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGCGTT 129858 |||||| ||||||| ||||| ||||||| ||| || ||||| ||||| |||| ||| | Sbjct 565393 CTTTTCGTGTTGCACGCATCCTTGTACAACATATATGGCGTACCCGTCTCGATTTGAGAC 565334 Query 129859 TCGACAATGGTCCTGAACAAGTCTCGAGCCTTGATCTGTCTTACAAATTTGCCACATTTC 129918 | | |||| || | | || || || |||| ||| | || || || || || | Sbjct 565333 TGTAATATGGCACTCCAAAGTTCGCGTGCTCTGATTTGTTTGACGAA---GCGACCTTCC 565277 Query 129919 ---TCGTATGCCACATACAGTTGTTCAAATTCTGAGCCGTGTACGGTGTCGAGCAAC--- 129972 || ||| | | || | ||||| | |||| || | ||| | ||| Sbjct 565276 CTTTCATATCTCTCGTATAACACCTCAAAAGCGCTCCCGT--ACTGC-TCGGGTAACCCA 565220 Query 129973 GGCGATTCACGCGGACACATCAAACTCCACATTCCATCCGCTTCGACTCGTTTCATAAAC 130032 || ||| || || ||||||| |||||||| |||||| ||||||| |||||||||||| Sbjct 565219 GGGCATTGTCGAGGGCACATCAGACTCCACACTCCATCTTCTTCGACACGTTTCATAAAC 565160 Query 130033 AAATCGGGTACCCACAGGGCGTACAACAAATCTCGCGC 130070 | ||| || | ||| || || || ||||| ||||| || Sbjct 565159 AGATCCGGAATCCAAAGCGCATAGAACAAGTCTCGTGC 565122 >seq41 Length=265118 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 || || ||||| || ||||| || ||||| ||||| | || || || || || | | Sbjct 262952 ATTCAGATTTTCGTCAAAACCTTGACCGGCAAAACTATTACGCTCGATGTCGAGCCGTCG 262893 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| || |||||||||||||| |||||||| || || || Sbjct 262892 GACACGATCGATAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCGCCGGACCAG 262833 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || |||||||| || ||||| |||||| ||||| | ||||||||| Sbjct 262832 CAACGTCTCATTTTTGCCGGAAAGCAGTTGGAGGATGGACGCACTTTGAGCGATTACAAT 262773 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||||| ||| || | ||| | ||||||||||||||||| || Sbjct 262772 ATTCAAAAGGAAAGTACTTTGCATCTCGTTTTGCGATTGCGCGGTGG 262726 >seq82 Length=265081 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 || || |||||||| ||||| || || || ||||| | || || || || || | | Sbjct 263232 ATTCAGATTTTTGTCAAAACCTTGACTGGAAAAACTATTACGCTCGATGTCGAGCCGTCG 263173 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| || |||||||||||||| |||||||| || || || Sbjct 263172 GACACGATTGATAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCTCCGGACCAG 263113 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || |||||||| || ||||| |||||| ||||| | ||||||||| Sbjct 263112 CAACGTCTCATTTTTGCCGGAAAGCAGTTGGAGGATGGACGCACTTTGAGCGATTACAAT 263053 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||||| ||| || | ||| | || |||||||||||||| || Sbjct 263052 ATTCAAAAGGAAAGTACTTTGCATCTTGTCTTGCGATTGCGCGGTGG 263006 >seq142 Length=241092 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || || | || ||||| || | || || || || || | | Sbjct 170543 ATGCAAATTTTCGTAAAGACACTGACGGGTAAGACCATTACCCTGGACGTTGAGCCTTCG 170484 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| | |||| || || |||||||||||||| ||||| || |||||| Sbjct 170483 GATACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGAATTCCCCCGGATCAA 170424 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || ||||| ||||| || || ||| || || | |||||||| Sbjct 170423 CAACGATTGATTTTCGCCGGTAAACAATTGGAAGATGGACGTACTTTGAGTGATTACAAT 170364 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||||||||||||| | || || |||||||| | || || ||| Sbjct 170363 ATTCAAAAAGAATCCACCTTGCACTTGGTTTTGCGTCTCCGAGGTGGT 170316 >seq67 Length=439500 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || || | || ||||| || | || || || || || | | Sbjct 3069 ATGCAAATTTTCGTAAAGACACTGACGGGTAAGACCATTACCCTGGACGTTGAGCCGTCG 3010 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || || |||||||||||||| ||||| || |||||| Sbjct 3009 GACACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGAATTCCCCCGGATCAA 2950 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || ||||| ||||| || || ||| || || | |||||||| Sbjct 2949 CAACGATTGATTTTCGCCGGTAAACAATTGGAAGATGGACGTACGTTGAGTGATTACAAT 2890 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 ||||| |||||||| ||| | || || |||||||| Sbjct 2889 ATTCAGAAAGAATCTACCTTGCACTTGGTTTTGCG 2855 >seq168 Length=39825 Score = 102 bits (112), Expect = 7e-17 Identities = 144/198 (73%), Gaps = 12/198 (6%) Strand=Plus/Minus Query 129702 GGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGCACAA 129761 |||||| ||||||||||| |||| | | |||||||||||||||| | |||||| Sbjct 29414 GGCCAAGTTGCAGACGGCGGTTTCATCCGGTGCGGTGTACTCGACAATTTCCGTGCACAA 29355 Query 129762 ATTACTATTTTTAATGGTGCCCAAATGCTTTTGATT--ACTTTTCATGTTGCAAGCATCT 129819 || | |||||| ||||| | ||| || || ||||||||| |||||||||| Sbjct 29354 GTTGGAACAACGAATGGTACCCAAGTTCTTCTGGTTCGACTTTTCAT--TGCAAGCATCC 29297 Query 129820 TTGTACATCATGTACGGCGTGCCCGTTTCGACTTGCGTTTCGACAATGGTCCTGAAC--- 129876 ||||| | ||||| ||||| || ||||| ||||||| || | ||||| |||| Sbjct 29296 TTGTAGAGAATGTAAGGCGTTCCAGTTTCCACTTGCGAGTCCAAAATGG---CGAACCAC 29240 Query 129877 -AAGTCTCGAGCCTTGAT 129893 |||||| | |||||||| Sbjct 29239 AAAGTCT-GTGCCTTGAT 29223 >seq10 Length=152390 Score = 84.2 bits (92), Expect = 2e-11 Identities = 121/169 (72%), Gaps = 4/169 (2%) Strand=Plus/Minus Query 129702 GGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGCACAA 129761 |||||| ||||||||||| |||| | | |||||||||| ||||| | |||||| Sbjct 133801 GGCCAAGTTGCAGACGGCGGTTTCATCCGGTGCGGTGTACTCGACGATTTCCGTGCACAA 133742 Query 129762 ATTACTATTTTTAATGGTGCCCAAATGCTTTTGATT--ACTTTTCATGTTGCAAGCATCT 129819 || |||||||||||| | || || || |||||||| ||||| || || Sbjct 133741 GTTGGAGCAACGAATGGTGCCCAAGTTTTTCTGGTTCGACTTTTCA--TTGCAGGCGTCC 133684 Query 129820 TTGTACATCATGTACGGCGTGCCCGTTTCGACTTGCGTTTCGACAATGG 129868 ||||| | ||||| ||||| || ||||| ||||||| || | ||||| Sbjct 133683 TTGTAGAGAATGTAAGGCGTTCCAGTTTCCACTTGCGAGTCCAAAATGG 133635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726490946675