Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq142 120 3e-22 seq67 118 9e-22 seq232 114 1e-20 seq82 114 1e-20 seq41 114 1e-20 seq226 100 2e-16 seq120 100 2e-16 seq2 96.9 3e-15 >seq142 Length=241092 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| || || || | |||||| || || | || |||||||||||||| |||||||| || Sbjct 170316 ACCACCTCGGAGACGCAAAACCAAGTGCAAGGTGGATTCTTTTTGAATATTGTAATCACT 170375 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || |||||| |||||| | ||||||||| ||| | || | || ||||| ||||| || Sbjct 170376 CAAAGTACGTCCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGG 170435 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| || || ||||| ||||| || | | || | || || | | || || Sbjct 170436 AATTCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTATCCGAAGGCTCAAC 170495 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 ||||| ||| | || || || ||||| || ||||| ||||| |||||| Sbjct 170496 GTCCAGGGTAATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCATG 170544 >seq67 Length=439500 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || || || || | |||||| || || | ||||||||||| ||||| |||||||| ||| Sbjct 2843 CCACCTCGAAGACGCAAAACCAAGTGCAAGGTAGATTCTTTCTGAATATTGTAATCACTC 2902 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||||| |||||| | ||||||||| ||| | || | || ||||| ||||| ||| Sbjct 2903 AACGTACGTCCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGA 2962 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || || || ||||| ||||| || | | || | ||||| | | || ||| Sbjct 2963 ATTCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGGCTCAACG 3022 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 |||| ||| | || || || ||||| || ||||| ||||| |||||| Sbjct 3023 TCCAGGGTAATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCATG 3070 >seq232 Length=134552 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| || || | || || ||| | ||| | || ||| |||||||| ||||||||||| Sbjct 133042 ACCACCGCGCAATCGCAGAACAAGATGCAAAGTGCTTTCCTTTTGAATATTGTAATCGCT 133101 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | ||| || |||||| | || ||||| || | |||||||| || ||||||||||| Sbjct 133102 TAAAGTGCGTCCATCTTCCAACTGCTTACCGGCAAAAATGAGACGTTGCTGGTCCGGAGG 133161 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGT-TTTAGCTGTTCAACGGTGTCGGTGGATTCGA 114333 ||| ||||| ||||| || ||| || || | | || | ||||| | | |||| Sbjct 133162 AATACCTTCCTTGTCTTGGAT-TTTGGTCTTGACATTATCGATCGTGTCCGACGGCTCGA 133220 Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 |||| | || | ||||| ||||||| |||||| || |||||||| ||| Sbjct 133221 CGTCAAGCGTAATAGTTTTTCCGGTCAAAGTTTTGACGAAAATCTGAATG 133270 >seq82 Length=265081 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || || || | || ||| || | ||| | ||| ||| |||||||| |||||||||||| Sbjct 263006 CCACCGCGCAATCGCAAGACAAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTC 263065 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||| || ||| || | || || || || | |||||||| || |||||||||||| Sbjct 263066 AAAGTGCGTCCATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGAGGA 263125 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||| ||||| |||||| || | | |||| ||||| | | ||||| Sbjct 263126 ATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTATCAATCGTGTCCGACGGCTCGACA 263185 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || | || | ||||| || |||| ||||| ||||||||||| ||| Sbjct 263186 TCGAGCGTAATAGTTTTTCCAGTCAAGGTTTTGACAAAAATCTGAATG 263233 >seq41 Length=265118 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || || || | || |||||| | ||| | ||| ||| |||||||| |||||||||||| Sbjct 262726 CCACCGCGCAATCGCAAAACGAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTC 262785 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||| || ||| || | || || || || | |||||||| || |||||||| ||| Sbjct 262786 AAAGTGCGTCCATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGCGGA 262845 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||| ||||| |||||| || | | || | ||||| | | ||||| Sbjct 262846 ATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTATCGATCGTGTCCGACGGCTCGACA 262905 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || | || | ||||||||||||| ||||| || |||||||| ||| Sbjct 262906 TCGAGCGTAATAGTTTTGCCGGTCAAGGTTTTGACGAAAATCTGAATG 262953 >seq226 Length=603765 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | ||| || || || | ||||| || || || |||||||| ||| Sbjct 85851 ATACCTCCGCGGAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCG 85910 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| || || || || || || || || || |||| | ||||||||| || || Sbjct 85911 CTCAACGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGC 85970 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| ||||| || | | || | |||||| | || || Sbjct 85971 GGAATTCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCA 86030 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || ||||||| ||| || || ||||||||||| Sbjct 86031 ACATCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 86080 Score = 98.7 bits (108), Expect = 8e-16 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 114151 AAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAAT 114210 |||| || || || || | ||| || || || | ||||| || || || |||||||| | Sbjct 85621 AAATTCCACCGCGGAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGT 85680 Query 114211 CGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCG 114270 |||||| || || || || || || || || || |||| | ||||||||| || | Sbjct 85681 CGCTCAACGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAG 85740 Query 114271 GAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATT 114330 | ||||| ||||| ||||| ||||| || | | || | |||||| | || | Sbjct 85741 GCGGAATTCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCT 85800 Query 114331 CGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || || | ||| | || || ||||||| ||| || || ||||||||||| Sbjct 85801 CAACATCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 85852 >seq120 Length=609189 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| | || | ||| ||||| | || |||||||| || |||||||||||| Sbjct 562011 ACCACCACGCAATCGGAGAACCAAATGCAAGGTCGATTCTTTCTGGATGTTGTAATCGGA 561952 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || || ||| |||||| | ||||| || ||| | || ||||||||||| |||||||| Sbjct 561951 CAGTGTTCGACCATCTTCCAACTGTTTTCCGGCGAAAATCAGACGCTGTTGATCCGGAGG 561892 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| || || ||||| ||||| || | | || | ||||| | | ||||| Sbjct 561891 AATTCCCTCCTTGTCCTGGATCTTGGTCTTGACATTATCGATAGTGTCAGACGGCTCGAC 561832 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || || || |||| || ||||| || || ||||| Sbjct 561831 ATCGAGCGTGATGGTCTTACCCGTCAAGGTCTTTACGAAGATTTGCAT 561784 >seq2 Length=622807 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| | || | ||| ||||| | || |||||||| ||||||||||| ||| Sbjct 352847 ACCACCACGCAATCGGAGAACCAAATGCAAGGTCGATTCTTTCTGAATGTTGTAGTCGGA 352906 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || || ||| |||||| | ||||| || ||| | || | ||||||||| |||||||| Sbjct 352907 CAGTGTTCGACCATCTTCCAACTGTTTTCCGGCGAAAATCAAACGCTGTTGATCCGGAGG 352966 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| || || ||||| ||||| || | | || | ||||| | | ||||| Sbjct 352967 AATTCCCTCCTTGTCCTGGATCTTGGTCTTGACATTATCGATAGTGTCAGACGGCTCGAC 353026 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || || || |||| || ||||| || || ||||| Sbjct 353027 ATCGAGCGTGATGGTCTTACCCGTCAAGGTCTTTACGAAGATTTGCAT 353074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420132889485540