Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq168 134 3e-26 seq10 118 2e-21 seq2 93.3 8e-14 seq194 91.5 3e-13 seq120 84.2 4e-11 >seq168 Length=39825 Score = 134 bits (148), Expect = 3e-26 Identities = 495/770 (64%), Gaps = 4/770 (1%) Strand=Plus/Minus Query 244685 CTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAG 244744 ||||||| |||||||||||| || |||| |||||||| |||||| || ||||| Sbjct 29416 CTGGCCAAGTTGCAGACGGCGGTTTCATCCGGTGCGGTGTACTCGACAATTTCCGTGCAC 29357 Query 244745 AGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCC 244804 | ||| || ||||| |||| || || || || ||||| | ||||| || ||| Sbjct 29356 AAGTTGGAACAACGAATGGTACCCAAGTTCTTCTGGTTCGACTTTTCATTGCAAGCATCC 29297 Query 244805 TTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAG- 244863 |||||||| ||| | ||| || || || | || | | | | | | | ||| | Sbjct 29296 TTGTAGAGAATGTAAGGCGTTCCAGTTTCCACTTGCGAGTCCAAAATGGCGAACCACAAA 29237 Query 244864 GTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGC 244923 ||| | ||||||| ||| ||||| || ||| || || ||||| || Sbjct 29236 GTCTGT-GCCTTGATGGTCTGACGAGCGCGTCCTTCTTGTTCATACTTTTCGTACAATGC 29178 Query 244924 CTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACT 244983 |||||| || | || || ||| | || || || | ||||| | | ||| Sbjct 29177 CTCGAATTCAGCTCCGTAGCAATCGGCAAGTCCAGGTGCCTCATTGGGGCAGAACAAACT 29118 Query 244984 CCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAA 245043 ||| | | |||||||| | || |||||| | ||||| | ||| || || | || Sbjct 29117 CCAAGTGGAGTTTTCCTTGACTCGCTTCATGAACAAATCGGGCACCCAAAGCGCGTAAAA 29058 Query 245044 GAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTG-TTCTTCCTCAGCTCCAAAAAGTCAA 245102 ||| || | | | | | | | | | ||| ||||| | || || | || |||| Sbjct 29057 GAGATCACGCGCACGAT-CGCTTTCATTTCCGTGATTCTTGCGCAAATCAAGGAATTCAA 28999 Query 245103 AGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTC 245162 |||| ||| | ||||| ||||||| ||| || | ||| |||||| || | Sbjct 28998 AGACATCGGCATGCCACGGCTCCAAATAGCAGGCAATACTGCCTTTACGCTTGCCACCAC 28939 Query 245163 CCTGGTCCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAG 245222 |||| ||||| | | | |||||||| ||| || | ||||| || ||||| | Sbjct 28938 CCTGATCCACATAACGCGCCGTGTTGTTGAAGACGCGAAGCATGGGCACAATACCGTTCG 28879 Query 245223 AGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGC 245282 | |||||||| ||| ||||||| || | | | |||| |||| | | Sbjct 28878 ATGTTCCGTTGGTACCCCGAATGTAGGATTTGCTGGCTCGAATGTTGTGAATGGCGAGAC 28819 Query 245283 CTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCT 245342 | | || ||||||| ||||||||||| ||||||| |||||| || || || || | Sbjct 28818 CGATACCTCCGGCGTACTTGGAGATGATGGCGCAGTTCTTGAGCGTATCGTAAATACCTT 28759 Query 245343 CCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGC 245402 | || ||| ||||||| |||||| ||||| || |||| |||||| || | | | Sbjct 28758 CAATTGAATCCTGCTTCATGGTGAGCAAGAAGCACGATGACATTTGGGGCATGTTGGTTC 28699 Query 245403 ACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGG 245452 | |||||| || ||||| | ||||| |||||||| || |||| ||| Sbjct 28698 CGGCGTTGAAGAGCGTGGGCGTAGCGTGCGTAAAGTACCGATTCGAAAGG 28649 >seq10 Length=152390 Score = 118 bits (130), Expect = 2e-21 Identities = 496/774 (64%), Gaps = 12/774 (2%) Strand=Plus/Minus Query 244685 CTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAG 244744 ||||||| |||||||||||| || |||| |||||||| ||| || || ||||| Sbjct 133803 CTGGCCAAGTTGCAGACGGCGGTTTCATCCGGTGCGGTGTACTCGACGATTTCCGTGCAC 133744 Query 244745 AGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCC 244804 | ||| ||| |||||||||| || | || || ||||| | |||||||||||| Sbjct 133743 AAGTTGGAGCAACGAATGGTGCCCAAGTTTTTCTGGTTCGACTTTTCATTGCAGGCGTCC 133684 Query 244805 TTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAG- 244863 |||||||| ||| | ||| || || || | || | | | | | | | ||| | Sbjct 133683 TTGTAGAGAATGTAAGGCGTTCCAGTTTCCACTTGCGAGTCCAAAATGGCGAACCACAAC 133624 Query 244864 GTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGC 244923 ||| | ||||| | ||| ||||| || || || || ||||| || Sbjct 133623 GTCTGT-GCCTTTATAGTCTGACGAGCGCGTCCTTCCTGTTCATACTTTTCGTACAACGC 133565 Query 244924 CTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCC---GGGCACATGAG 244980 |||||| |||| || || ||| | || ||||| || | | ||||| | | Sbjct 133564 CTCGAATTCGGCTCCGTAGCAATCGGCAAGTCCGGG---CGCCTCATTGGGGCAGAACAA 133508 Query 244981 ACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTG 245040 |||||| | | |||||||| | || |||||| | ||||| | ||| || || | Sbjct 133507 ACTCCAAGTGGAGTTTTCCTTGACTCGCTTCATGAACAAATCGGGCACCCAAAGCGCGTA 133448 Query 245041 GAAGAGGTCCCTGGTCCTCT-GCTCGTCCGAGCCAGTG-TTCTTCCTCAGCTCCAAAAAG 245098 || || || | | | | ||| || ||| ||| || || | || |||| || Sbjct 133447 AAATAGATCACGCGCACGATCGCTT-TCATTGCC-GTGATTTTTGCGCAAATCCAGGAAC 133390 Query 245099 TCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTG 245158 |||||||| ||| | ||||| ||||||| ||| || | ||| |||||| Sbjct 133389 TCAAAGACATCGGCATGCCACGGCTCCAAATAGCAGGCAATACTGCCTTTGCGCTTGCCA 133330 Query 245159 CCTCCCTGGTCCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCG 245218 || ||||| ||||| | | | |||||| | ||| || | ||||| || ||| Sbjct 133329 CCACCCTGATCCACGTAACGCGCCGTGTTGTTGAAAACGCGAAGCATGGGCACAATACCG 133270 Query 245219 TTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGAC 245278 || || |||||||| || ||||||| || | | | |||| |||| Sbjct 133269 TTCGACGTTCCGTTGGTTCCGCGAATGTAGGATTTGCTGGCTCGAATGTTGTGAATGGCG 133210 Query 245279 ATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATG 245338 | || | || || || | ||||||||||| ||||||| |||| | || || || Sbjct 133209 AGACCGATACCTCCAGCATACTTGGAGATGATGGCGCAGTTCTTAAGCGTATCGTAGATA 133150 Query 245339 CCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGG 245398 || || || |||| ||||||| |||||| ||||| || |||| || ||| || | Sbjct 133149 CCTTCAATAGAGTCCTGCTTCATGGTGAGCAAGAAGCACGACGACATTTGCGGCATGTTG 133090 Query 245399 CTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGG 245452 | | | ||||| || ||||| | ||||| |||||||| || |||| ||| Sbjct 133089 GTTCCGGCATTGAAGAGCGTGGGCGTAGCGTGCGTAAAGTACCGATTCGAAAGG 133036 >seq2 Length=622807 Score = 93.3 bits (102), Expect = 8e-14 Identities = 323/496 (65%), Gaps = 16/496 (3%) Strand=Plus/Plus Query 244685 CTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAG 244744 || || |||||||| || || || || || | | | |||||||||||||| || ||||| Sbjct 349312 CTTGCAAGGTTGCAAACAGCTACTTCTTCTGGGCTTGTGTACTGGACAATTTCCGTGCAA 349371 Query 244745 AGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCC 244804 || |||||||||| |||||| || || | || || || ||| | |||||| | ||| Sbjct 349372 AGATTACTGCACTGGATGGTTCCAAGATTCTTCTGGTTACTCTTCGTGTTGCACGAATCC 349431 Query 244805 TTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGG 244864 ||||| | |||| | ||| || || |||| || | | | | | |||| || Sbjct 349432 TTGTACAACATGTATGGCGTACCTGTTTCGATTTGAGACTCTAATATGGCACTCCAAAGT 349491 Query 244865 TCCCTAGCCTTGACCGTCCT------GCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTAC 244918 || | || ||| | | |||| |||| |||| ||||| | ||| Sbjct 349492 TCGCGTGCTCTGATTTGCTTGACAAAGCGA-CCTT-CCCT----TTCGTATCCCTCGTAT 349545 Query 244919 AGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA-CGACGCCGGGCACAT 244977 | | || || || ||| | ||| || || ||||| | || |||||||| Sbjct 349546 AACTCTTCAAATGCGCTGCCGTACTGTTCGGGTAAACCAGGGCATTGTCG-AGGGCACAT 349604 Query 244978 GAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGC 245037 ||||||||| || | |||| || | | ||| || || ||||| ||||| || || Sbjct 349605 CAGACTCCACATTCCATCTTCCTCAACACGTTTCATAAACAGATCGGGAATCCAAAGCGC 349664 Query 245038 CTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTG-TTCTTCCTCAGCTCCAAAA 245096 | ||| | ||| | | || ||||| || || ||| || ||| | || | ||| | Sbjct 349665 ATAGAACAAGTCTCGTGCCCGATGCTCTTCTTTTCC-GTGATTTTTCTTGAGATTCAACA 349723 Query 245097 AGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGT 245156 ||||||| || ||||| || |||| ||||||||| | || || ||||||||| Sbjct 349724 CATCAAAGATATCAGAATGCCATGGTTCCAGGTAGACAGCAAAAGCTCCCGGCCGCTTGC 349783 Query 245157 TGCCTCCCTGGTCCAC 245172 || |||||||| || Sbjct 349784 CCCCGCCCTGGTCAAC 349799 >seq194 Length=282305 Score = 91.5 bits (100), Expect = 3e-13 Identities = 110/147 (75%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 42708 GTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGG 42767 || || ||| | |||||||| ||||| ||||| || ||| | ||| |||| |||||| Sbjct 115943 GTCGCATTTGCGGCCGTCGAAGGCATTTTCTTTTCCGGCTCGTTCTGTGCCATTTTCTGG 115884 Query 42768 CTCAAGCAGAAGGTGTC-GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGA 42826 |||||| | | || ||| |||||||| ||| ||| || || ||| | ||||| | || Sbjct 115883 CTCAAG-AAACGGGGTCTTATGCCCGGTCTCTGCTTTTCCAATGAATTGATCAGTCGCGA 115825 Query 42827 CGAGGGGCTGCATAGGGACTTTGCCTG 42853 ||| || |||||| | || |||||||| Sbjct 115824 CGAAGGTCTGCATTGTGATTTTGCCTG 115798 >seq120 Length=609189 Score = 84.2 bits (92), Expect = 4e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 244685 CTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAG 244744 || || |||||||| || || || ||||| | | || ||||||||||| || |||||| Sbjct 565492 CTAGCAAGGTTGCAAACAGCTACTTCCTCTGGACTTGTATACTGGACAATTTCCGTGCAG 565433 Query 244745 AGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCC 244804 || |||||||||| || || || || | || || || || | |||||| || ||| Sbjct 565432 AGATTACTGCACTGAATCGTTCCTAGATTCTTCTGGTTACTTTTCGTGTTGCACGCATCC 565373 Query 244805 TTGTAGAGCATGAAGGGCCCCCCGGTCTCGA 244835 ||||| | ||| | ||| || ||||||| Sbjct 565372 TTGTACAACATATATGGCGTACCCGTCTCGA 565342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944335717749200