Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq226 132 1e-25 seq120 131 4e-25 seq2 127 5e-24 seq134 120 7e-22 seq67 113 1e-19 >seq226 Length=603765 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||||||||| | | || | |||| || || || ||||| || |||||| Sbjct 85625 TCCACCGCGGAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCT 85684 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | |||||| ||||| || | || ||||| || ||||||| |||||||||| | || Sbjct 85685 CAACGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGG 85744 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 |||||||| || |||||||| || | || ||||| || || | || | || || Sbjct 85745 AATTCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAAC 85804 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| ||||||| |||||||||||| |||||||| Sbjct 85805 ATCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 85852 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||| | |||||| ||||| || | || ||||| || ||| Sbjct 85890 TCCTTCTGGATGTTGTAGTCGCTCAACGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAG 85949 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| |||||||||| | || |||||||| || |||||||| || | || ||||| Sbjct 85950 ATCAAACGCTGTTGATCAGGCGGAATTCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTG 86009 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || | || || ||||| ||||| ||||| ||||||| |||||||||| Sbjct 86010 TCGATGGTGTCAGAGGGCTCAACATCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACG 86069 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 86070 AAAATCTGCAT 86080 >seq120 Length=609189 Score = 131 bits (144), Expect = 4e-25 Identities = 146/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| ||||| || || |||| || || || || ||||| || |||||||| ||||| Sbjct 561975 TTCTTTCTGGATGTTGTAATCGGACAGTGTTCGACCATCTTCCAACTGTTTTCCGGCGAA 561916 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||||||||||||| || ||||| || || |||||||| || | || || || Sbjct 561915 AATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCCTGGATCTTGGTCTTGACATT 561856 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || || || || ||||||||||| ||||| || |||| ||||| || Sbjct 561855 ATCGATAGTGTCAGACGGCTCGACATCGAGCGTGATGGTCTTACCCGTCAAGGTCTTTAC 561796 Query 288462 GAATATCTGCATTAT 288476 ||| || |||||||| Sbjct 561795 GAAGATTTGCATTAT 561781 >seq2 Length=622807 Score = 127 bits (140), Expect = 5e-24 Identities = 145/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| || || || ||||||| || || || || ||||| || |||||||| ||||| Sbjct 352883 TTCTTTCTGAATGTTGTAGTCGGACAGTGTTCGACCATCTTCCAACTGTTTTCCGGCGAA 352942 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||| |||||||||| || ||||| || || |||||||| || | || || || Sbjct 352943 AATCAAACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCCTGGATCTTGGTCTTGACATT 353002 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || || || || ||||||||||| ||||| || |||| ||||| || Sbjct 353003 ATCGATAGTGTCAGACGGCTCGACATCGAGCGTGATGGTCTTACCCGTCAAGGTCTTTAC 353062 Query 288462 GAATATCTGCATTAT 288476 ||| || |||||||| Sbjct 353063 GAAGATTTGCATTAT 353077 >seq134 Length=485476 Score = 120 bits (132), Expect = 7e-22 Identities = 314/476 (66%), Gaps = 6/476 (1%) Strand=Plus/Minus Query 325133 GGGTTGTAACTGGGAATGTTCGTCGACCATCCGGTTCCGATACCACTCGATCCATTCACC 325192 || ||||| | | || ||||| ||||| || ||||| |||||| || || ||||| Sbjct 51886 GGATTGTAGTTCGCAACATTCGTGGACCAGCCAGTTCCAATACCATCCGCACCGTTCACT 51827 Query 325193 AGGATACTCGGAATAACAGGCACATAATACTCTGGTTCGATCTTATCGCCGTCGTCGTAC 325252 || | | ||||| ||||| || ||| | |||||||| || | ||| ||||| | Sbjct 51826 AGAACCATGGGAATGACAGGAACGTAAAAGTCTGGTTCAATGGTCATGCCATCGTCCAAA 51767 Query 325253 ATATATTTCAGAAG---ATTGTCGTCCGTATCGACGAAAACCTGTCGAGTCTGAGGGTTC 325309 || || || | || |||||| | || || ||| || || || || | Sbjct 51766 CGGTAGTTGAGCAACTCATCGTCGTCGGGATGGA--AAATGGTG-CGTGTAATCGGCTCA 51710 Query 325310 AGTTTCatatatatatatCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCG 325369 ||| | | | || || || | ||| |||||| || ||| ||| | || ||| Sbjct 51709 AGTCGCGTGAAAATGTAACGAGGCGAAGCGGCATCCTTGCCGCCCATCAAACGCGTACCA 51650 Query 325370 AACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGG 325429 || || || | || |||| | || || || ||| || ||| | || || || | | Sbjct 51649 AATTGACCGGCTGGTGTCAACAAATTAATATTGTTGGACCCAACAAAGTCTTGAGCCATG 51590 Query 325430 TTCACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACG 325489 ||||| || || || || | ||||||||| || |||||||| ||| |||||| |||| | Sbjct 51589 TTCACAATCGTTCCCTGTAAAGATGCTTCACCGTGGTGATACGCGGAATGCTCGGCAATG 51530 Query 325490 TAACCGCTGAACTGTGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTGAATAT 325549 ||||| | | ||| || || || || || ||| ||||||||||| || ||| Sbjct 51529 TAACCAGTCAGCTGGGCCACTTTGACTTCACCTTTCAGCTTGCGCTTGAAGCATGCATAC 51470 Query 325550 ATCACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTC 325605 | || || ||||| ||||| ||||| || || |||| | |||||| ||||| Sbjct 51469 AAGACCTTTCGTTGCGAAGGCTTGAATCCGTCCACGAGACAAGGAATGGAACGTTC 51414 >seq67 Length=439500 Score = 113 bits (124), Expect = 1e-19 Identities = 150/207 (72%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| || ||||| || || | ||| ||||| ||||| |||||||| || ||||| Sbjct 2878 TTCTTTCTGAATATTGTAATCACTCAACGTACGTCCATCTTCCAATTGTTTACCGGCGAA 2937 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| || |||||| || ||| ||||| || || || ||||| || | || || Sbjct 2938 AATCAATCGTTGTTGA---TCCGGGGGAATTCCCTCCTTGTCTTGGATCTTGGTCTTGAC 2994 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||| || || | || || || || || || || || ||||| || ||||| ||||| Sbjct 2995 GTTGTCGATCGTGTCCGACGGCTCAACGTCCAGGGTAATGGTCTTACCCGTCAGTGTCTT 3054 Query 288459 GACGAATATCTGCATTATGTTATTCTA 288485 ||||| || ||||| ||||||||||| Sbjct 3055 TACGAAAATTTGCATGATGTTATTCTA 3081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179649941275010