Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq232 131 2e-25 seq10 125 7e-24 seq120 120 3e-22 seq2 114 1e-20 seq41 111 2e-19 seq226 96.9 3e-15 seq168 95.1 1e-14 >seq232 Length=134552 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| |||||||||| || || ||||| | || ||| |||||||| |||||||| Sbjct 133042 ACCACCGCGCAATCGCAGAACAAGATGCAAAGTGCTTTCCTTTTGAATATTGTAATCGCT 133101 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | ||||| | |||||| |||||| ||||||| || |||||||| ||||| Sbjct 133102 TAAAGTGCGTCCATCTTCCAACTGCTTACCGGCAAAAATGAGACGTTGCTGGTCCGGAGG 133161 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCAC-CGGCGTCCA 64394 ||| ||||| || ||||| ||||| ||| ||| || | || || |||| || | Sbjct 133162 AATACCTTCCTTGTCTTGGATTTTGGTCTTGACATTATCGATCGTGTCCGACGGC-TCGA 133220 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || | || | || || |||||||||||||| |||||||| || || Sbjct 133221 CGTCAAGCGTAATAGTTTTTCCGGTCAAAGTTTTGACGAAAATCTGAAT 133269 >seq10 Length=152390 Score = 125 bits (138), Expect = 7e-24 Identities = 372/565 (66%), Gaps = 19/565 (3%) Strand=Plus/Minus Query 154590 GCCAAGTTGCAAACGGCAATTTCTTCAGAACTACTGTATTGCACAATTTCTGCGCACAAA 154649 ||||||||||| ||||| |||| || | |||| | || ||||| | |||||| Sbjct 133800 GCCAAGTTGCAGACGGCGGTTTCATCCGGTGCGGTGTACTCGACGATTTCCGTGCACAAG 133741 Query 154650 TTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGTCTTTG 154709 || ||| ||||||||||||| ||||||||| ||||| || ||||| ||||| ||| Sbjct 133740 TTGGAGCAACGAATGGTGCCCAAGTTTTTCTGGTTCGACTTTTCATTGCAGGCGTCCTTG 133681 Query 154710 TACAAAATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAATAATTGTGCGAAACA-GACT 154768 || | |||||| || || || ||||||||||| | || | ||| ||||| || || Sbjct 133680 TAGAGAATGTAAGGCGTTCCAGTTTCCACTTGCGAGTCCAAAAT--GGCGAACCACAACG 133623 Query 154769 TC-GCGCCT---CAACTTGACAAGTAAATCGATTTTCGCTCTCATATTGTTCGTACAGTT 154824 || | |||| | |||| || || ||| ||||| | |||||||| Sbjct 133622 TCTGTGCCTTTATAGTCTGACGAG---CGCGTCCTTCCTGTTCATACTTTTCGTACAACG 133566 Query 154825 TTTCAAACTCTAAACTGTACACGTCCGACAAACCGGGACAGCGGTCGGGACACATCAATG 154884 || || || | ||| || | | ||||| | ||| || | ||| Sbjct 133565 CCTCGAATTCGGCTCCGTAGCAATCGGCAAGTCCGGGCGCCTCATTGGGGCAGAACAAAC 133506 Query 154885 ACCACATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTACA 154944 ||| | ||||| | || || ||||| |||||||| |||||||| | ||||| | Sbjct 133505 TCCAAGTGGAGTTTTCCTTGACTCGCTTCATGAACAAATCGGGCACCCAAAGCGCGTAAA 133446 Query 154945 ACAAATCACGCGCCTTTTTGTCTTCAGCGCC--CATGTTT-CGCTTTAAATTCAAAAAAT 155001 | | ||||||||| | | |||| ||| || ||| ||| |||| || || | Sbjct 133445 ATAGATCACGCGCACGATCGCTTTCATTGCCGTGATTTTTGCGC---AAATCCAGGAACT 133389 Query 155002 CATATATGTCGGCGTGCCACGGCTCTAAATATACGGCCATCGCGCCTTTGCGTTT---TC 155058 || | | ||||| ||||||||||| ||||| ||| || ||||||||| || | Sbjct 133388 CAAAGACATCGGCATGCCACGGCTCCAAATAGCAGGCAATACTGCCTTTGCGCTTGCCAC 133329 Query 155059 CTCCTTGATCCACGTGACGCACACAATTATTGTACACGCGCAACAATGGTTCCACGCCGC 155118 | || |||||||||| |||| | || ||| | ||||| | || || | | ||| Sbjct 133328 CACCCTGATCCACGTAACGCGCCGTGTTGTTGAAAACGCGAAGCATGGGCACAATACCGT 133269 Query 155119 TGGCCGTGCCGTTGGTGCCACGTAT 155143 | | ||| |||||||| || || || Sbjct 133268 TCGACGTTCCGTTGGTTCCGCGAAT 133244 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 153998 TAAATCTTCAACCAAGTGCTGGTTAATTACTTGAAAATCGCCGGCCAATACGCGGCGCAC 154057 ||| ||| || |||||| | ||| | || ||| || ||||| || ||||| || Sbjct 134490 TAACTCTCGAAGCAAGTGTTTGTTGACGACCGTAAACTCTCCGGCTAAAACGCGACGGTT 134431 Query 154058 ATACAAATTGCTGGTGAACGGCTCGAACGAT-TCGTTGTTGCCTAATATTTGAGCTGTAG 154116 |||| |||||||||||||| || | | | |||||||| || | || || || |||| Sbjct 134430 GTACATGTTGCTGGTGAACGGTTC-AGTGCTCTCGTTGTTACCAAGAATCTGTGCGGTAG 134372 Query 154117 TTGCTGTGGGCATATACGCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCA 154176 || ||||||||| || | |||||| |||||||| | ||| |||| || || || Sbjct 134371 ACGCCGTGGGCATAGGAGCTAGCAACAACGAGTTTCGGAGACCATGTTGAGCGATACGTT 134312 Query 154177 ATTTTAAATCTGCCCAATTCCA 154198 ||| || | ||||||| ||| Sbjct 134311 CTTTCAATGCCGCCCAATCCCA 134290 >seq120 Length=609189 Score = 120 bits (132), Expect = 3e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || ||||||| || || | ||| | ||||||||||| || ||||||||||| | Sbjct 562011 ACCACCACGCAATCGGAGAACCAAATGCAAGGTCGATTCTTTCTGGATGTTGTAATCGGA 561952 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | ||||| | ||| || ||||| |||| || ||||| || || ||||| Sbjct 561951 CAGTGTTCGACCATCTTCCAACTGTTTTCCGGCGAAAATCAGACGCTGTTGATCCGGAGG 561892 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCA-CCGGCGTCCA 64394 |||||| || || || || || || ||| ||| || | || ||| |||| || | Sbjct 561891 AATTCCCTCCTTGTCCTGGATCTTGGTCTTGACATTATCGATAGTGTCAGACGGC-TCGA 561833 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 | || | || | |||||| || ||||| || |||||||| ||||||||| Sbjct 561832 CATCGAGCGTGATGGTCTTACCCGTCAAGGTCTTTACGAAGATTTGCATT 561783 >seq2 Length=622807 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || ||||||| || || | ||| | ||||||||||| ||||||||||| || | Sbjct 352847 ACCACCACGCAATCGGAGAACCAAATGCAAGGTCGATTCTTTCTGAATGTTGTAGTCGGA 352906 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | ||||| | ||| || ||||| |||| | ||||| || || ||||| Sbjct 352907 CAGTGTTCGACCATCTTCCAACTGTTTTCCGGCGAAAATCAAACGCTGTTGATCCGGAGG 352966 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCA-CCGGCGTCCA 64394 |||||| || || || || || || ||| ||| || | || ||| |||| || | Sbjct 352967 AATTCCCTCCTTGTCCTGGATCTTGGTCTTGACATTATCGATAGTGTCAGACGGC-TCGA 353025 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 | || | || | |||||| || ||||| || |||||||| ||||||||| Sbjct 353026 CATCGAGCGTGATGGTCTTACCCGTCAAGGTCTTTACGAAGATTTGCATT 353075 >seq41 Length=265118 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || |||||||||| | || ||||| | || ||| |||||||| |||||||| Sbjct 262726 CCACCGCGCAATCGCAAAACGAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTC 262785 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| | || || | |||||| |||||| ||||||| || |||||||| || ||| Sbjct 262786 AAAGTGCGTCCATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGCGGA 262845 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCAC-CGGCGTCCAC 64395 || ||||| || ||||| || || ||| ||| || | || || |||| || || Sbjct 262846 ATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTATCGATCGTGTCCGACGGC-TCGAC 262904 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | || ||||||||||| ||||| |||||||| || || Sbjct 262905 ATCGAGCGTAATAGTTTTGCCGGTCAAGGTTTTGACGAAAATCTGAAT 262952 >seq226 Length=603765 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || || || || || |||||||| || | ||||| |||| || |||||| Sbjct 85650 TGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAACGTGCGGCCGTCCTCGAGCTGC 85709 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || |||||| | || | ||||| || || || ||||||||||| || || || || || Sbjct 85710 TTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGAATTCCTTCCTTGTCCTGGATCTTG 85769 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||| || || | || ||| || || || || | || | |||||| |||||| Sbjct 85770 GTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACATCGAGGGTGATGGTCTTTCCGGTC 85829 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 ||||| || |||||||| ||||| Sbjct 85830 AAAGTCTTGACGAAAATCTGCAT 85852 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || || || || || |||||||| || | ||||| |||| || |||||| Sbjct 85878 TGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAACGTGCGGCCGTCCTCGAGCTGC 85937 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || |||||| | || | ||||| || || || ||||||||||| || || || || || Sbjct 85938 TTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGAATTCCTTCCTTGTCCTGGATCTTG 85997 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||| || || | || ||| || || || || | || | |||||| |||||| Sbjct 85998 GTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACATCGAGGGTGATGGTCTTTCCGGTC 86057 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 ||||| || |||||||| ||||| Sbjct 86058 AAAGTCTTGACGAAAATCTGCAT 86080 >seq168 Length=39825 Score = 95.1 bits (104), Expect = 1e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 154590 GCCAAGTTGCAAACGGCAATTTCTTCAGAACTACTGTATTGCACAATTTCTGCGCACAAA 154649 ||||||||||| ||||| |||| || | |||| | |||||||| | |||||| Sbjct 29413 GCCAAGTTGCAGACGGCGGTTTCATCCGGTGCGGTGTACTCGACAATTTCCGTGCACAAG 29354 Query 154650 TTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGTCTTTG 154709 || || |||||||| |||| ||| ||||| ||||| || ||||| || || ||| Sbjct 29353 TTGGAACAACGAATGGTACCCAAGTTCTTCTGGTTCGACTTTTCATTGCAAGCATCCTTG 29294 Query 154710 TACAAAATGTACGGGGTGCCCGTTTCCACTTG 154741 || | |||||| || || || ||||||||||| Sbjct 29293 TAGAGAATGTAAGGCGTTCCAGTTTCCACTTG 29262 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/202 (71%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 153998 TAAATCTTCAACCAAGTGCTGGTTAATTACTTGAAAATCGCCGGCCAATACGCGGCGCAC 154057 ||| ||| || |||||| | ||| | || ||| || |||||||| ||||| || Sbjct 30102 TAACTCTCGAAGCAAGTGTTTGTTGACGACCGTAAACTCTCCGGCCAAAACGCGACGGTT 30043 Query 154058 ATACAAATTGCTGGTGAACGGCTCGAACGAT-TCGTTGTTGCCTAATATTTGAGCTGTAG 154116 |||| |||||||||||||| || | | | |||||||| || | || || ||||||| Sbjct 30042 GTACATGTTGCTGGTGAACGGTTC-AGTGCTCTCGTTGTTACCAAGAATCTGTGCTGTAG 29984 Query 154117 TTGCTGTGGGCATATACGCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCA 154176 || ||||||||| || | || ||| |||||||| | ||| |||| ||||| || Sbjct 29983 ACGCCGTGGGCATAGGGGCTAGCAGCAACGAGTTTCGGAGACCATGTTGAGCAATACGTT 29924 Query 154177 ATTTTAAATCTGCCCAATTCCA 154198 ||| | | ||||||| ||| Sbjct 29923 CTTTCAGTGCCGCCCAATCCCA 29902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499642957559800