Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq168 251 7e-62 seq10 239 4e-58 >seq168 Length=39825 Score = 251 bits (278), Expect = 7e-62 Identities = 452/659 (69%), Gaps = 6/659 (1%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||||||||||||| |||||||| || || ||| |||||||| || ||| | || | Sbjct 28500 TACGATTACTTTGGATTCAAAACACTCGAAAAGAGTTACCTCCTTAAAATGCACGGACAG 28559 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||| || || || | || ||||||| || || |||| |||||||| | ||| Sbjct 28560 ATTGCCGAACGTCCCCAGTTGTTGTTGATGCGTGTTGCTGTCGGTATTCACGGAGATGAC 28619 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTA---TACCATGGCC 93894 || || || || | | | | || ||| | | || |||| ||| || Sbjct 28620 ATCCCCAAAGTCATTGAGACCTACAACGACCTTTCG---AATCGGTACTTTACGCACGCT 28676 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954 || || || || |||||||| || ||| |||| || ||||| ||||| ||| || | Sbjct 28677 ACGCCCACGCTCTTCAACGCCGGAACCAACATGCCCCAAATGTCATCGTGCTTCTTGCTC 28736 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 || | ||| || || || || |||| ||| | |||||| |||| || | |||| Sbjct 28737 ACCATGAAGCAGGATTCAATTGAAGGTATTTACGATACGCTCAAGAACTGCGCCATCATC 28796 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || ||||| || || ||||| || | ||| || | || ||||| |||||| Sbjct 28797 TCCAAGTACGCCGGAGGTATCGGTCTCGCCATTCACAACATTCGAGCCAGCAAATCCTAC 28856 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 || || |||||||| || || || ||||| | || || ||||| || |||||||||||| Sbjct 28857 ATTCGGGGTACCAACGGAACATCGAACGGTATTGTGCCCATGCTTCGCGTCTTCAACAAC 28916 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 ||||||| || ||||| ||||||||||| | | | || || | | || |||| | Sbjct 28917 ACGGCGCGTTATGTGGATCAGGGTGGTGGCAAGCGTAAAGGCAGTATTGCCTGCTATTTG 28976 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| ||||| || || || | ||| | || |||| ||||| ||||| || || Sbjct 28977 GAGCCGTGGCATGCCGATGTCTTTGAATTCCTTGATTTGCGCAAGAATCACGGAAATGAA 29036 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 || | || | || ||||| ||||| || |||||||| || | || ||||| || Sbjct 29037 AGCGATCGTGCGCGTGATCTCTTTTACGCGCTTTGGGTGCCCGATTTGTTCATGAAGCGA 29096 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373 ||| || |||||||| | |||||| | || || |||||||| || ||||| |||| Sbjct 29097 GTCAAGGAAAACTCCACTTGGAGTTTGTTCTGCCCCAATGAGGCACCTGGACTTGCCGA 29155 Score = 109 bits (120), Expect = 5e-19 Identities = 314/484 (65%), Gaps = 4/484 (1%) Strand=Plus/Plus Query 95075 AACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGA 95134 |||| ||| | |||| || |||| | ||||| ||||||||||| || || || |||| Sbjct 29936 AACATGGTCTCCGAAACTCGTTGCTGCTAGCCCCTATGCCCACGGCGTCTACAGCACAGA 29995 Query 95135 TCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGC 95194 | ||||| ||||||||| ||||| |||||| |||| |||||||| | || || Sbjct 29996 TTCTTGGTAACAACGAGAGCACTGAACCGTTCACCAGCAACATGTACAACCGTCGCGTTT 30055 Query 95195 TCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTG 95254 | ||||| || || | ||| ||||||| ||| | || || || | || | | ||| Sbjct 30056 TGGCCGGAGAGTTTACGGTCGTCAACAAACACTTGCTTCGAGAGTTAACTGCCCGTGGTT 30115 Query 95255 TGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCC 95314 ||||| ||| | || || | | | || |||||| || | || ||| || Sbjct 30116 TGTGGAATGAAGATGTTCGCAATCGTATTATCGCCGACAACGGATCTATTCAAAACGTCA 30175 Query 95315 CGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCG 95374 || |||||| ||| || | ||||| |||||||||||||| || ||||| Sbjct 30176 AATCTATCCCGGAGTCCATTCGGGATGTGTACAAAACCGTGTGGGAGATTCCTCAGCGTT 30235 Query 95375 TGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAGAGNNNNNNNNNNNNNN 95434 || | || ||||||| |||| || | ||| |||||||| Sbjct 30236 CCATTTTAGATATGGCGGCCGAACGCGCTCCTTACATTTGCCAGAGTCAGTCTTTGAATG 30295 Query 95435 NNNNNATGGCCGAGCCC-AGTCGCGGAAAAATAACGTCCATGTTGTTCTACGGGTGG-AG 95492 ||||||| ||| | || | ||| | || ||| || |||| ||| || Sbjct 30296 TGCACTTGGCCGAACCCGACTC-CAAGAAATTGACCAGTATGCACTTTTACGCATGGAAG 30354 Query 95493 AAAGGGTCTCAAGACCGGTATGTATTATTTGCGAACCAGGCCAAAGGCGGACTCCATACA 95552 ||||| | | ||||| |||||||| |||||||| || | || ||||| ||| | || | Sbjct 30355 AAAGGAT-TGAAGACGGGTATGTACTATTTGCGCACTCGTCCCAAGGCCGACGCTATCAA 30413 Query 95553 GTTC 95556 |||| Sbjct 30414 GTTC 30417 >seq10 Length=152390 Score = 239 bits (264), Expect = 4e-58 Identities = 449/659 (68%), Gaps = 6/659 (1%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||||||||||||| ||||||||| || || ||| ||||| ||||||||| | || | Sbjct 132887 TACGATTACTTTGGCTTCAAAACACTCGAAAAGAGTTACCTTCTCAAGATGCACGGACAG 132946 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || | || || || || ||| ||||||| || || | || |||||||| | ||| Sbjct 132947 ATTGCTGAACGTCCCCAGTTGCTATTGATGCGTGTTGCTGTTGGAATTCACGGAGATGAC 133006 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTA---TACCATGGCC 93894 || || || || | | | | || ||| | | || |||| ||| || Sbjct 133007 ATCCCCAAAGTCATTGAGACCTACAACGACCTTTCG---AATCGGTACTTTACGCACGCT 133063 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954 || || || || ||||| || || ||| |||| || ||||| ||||| ||| || | Sbjct 133064 ACGCCCACGCTCTTCAATGCCGGAACCAACATGCCGCAAATGTCGTCGTGCTTCTTGCTC 133123 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 || | ||| ||||| || || || | ||| | || ||| |||| || | |||| Sbjct 133124 ACCATGAAGCAGGACTCTATTGAAGGTATCTACGATACGCTTAAGAACTGCGCCATCATC 133183 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || || || || || ||||| || | ||| || | || ||||| |||||| Sbjct 133184 TCCAAGTATGCTGGAGGTATCGGTCTCGCCATTCACAACATTCGAGCCAGCAAATCCTAC 133243 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 || ||||| ||||| || || || ||||| | || || ||||| || || ||||||||| Sbjct 133244 ATTCGCGGAACCAACGGAACGTCGAACGGTATTGTGCCCATGCTTCGCGTTTTCAACAAC 133303 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 ||||||| |||||||| ||||||||||| | | | || || | | || |||| | Sbjct 133304 ACGGCGCGTTACGTGGATCAGGGTGGTGGCAAGCGCAAAGGCAGTATTGCCTGCTATTTG 133363 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| ||||| || || || | ||| | || |||| || || |||||||| || Sbjct 133364 GAGCCGTGGCATGCCGATGTCTTTGAGTTCCTGGATTTGCGCAAAAATCACGGCAATGAA 133423 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 || | || | || || || ||||| || |||||||| || | || ||||| || Sbjct 133424 AGCGATCGTGCGCGTGATCTATTTTACGCGCTTTGGGTGCCCGATTTGTTCATGAAGCGA 133483 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373 ||| || |||||||| | |||||| | || || |||||||| |||||||| |||| Sbjct 133484 GTCAAGGAAAACTCCACTTGGAGTTTGTTCTGCCCCAATGAGGCGCCCGGACTTGCCGA 133542 Score = 105 bits (116), Expect = 7e-18 Identities = 313/484 (65%), Gaps = 4/484 (1%) Strand=Plus/Plus Query 95075 AACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGA 95134 |||| ||| | |||| || || | | || || ||||||||||| || || || |||| Sbjct 134324 AACATGGTCTCCGAAACTCGTTGTTGCTAGCTCCTATGCCCACGGCGTCTACCGCACAGA 134383 Query 95135 TCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGC 95194 | ||||| ||||||||| ||||| |||||| |||| |||||||| | || || Sbjct 134384 TTCTTGGTAACAACGAGAGCACTGAACCGTTCACCAGCAACATGTACAACCGTCGCGTTT 134443 Query 95195 TCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTG 95254 | ||||| || || | ||| ||||||| ||| | || || || | || | | ||| Sbjct 134444 TAGCCGGAGAGTTTACGGTCGTCAACAAACACTTGCTTCGAGAGTTAACTGCCCGTGGTT 134503 Query 95255 TGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCC 95314 ||||| ||| | || |||| | | || |||||| || | || ||| || Sbjct 134504 TGTGGAATGAAGATGTTCGCAACCGTATCATTGCCGACAACGGATCTATTCAAAACGTCA 134563 Query 95315 CGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCG 95374 || || ||| ||| || | |||||||| ||||||||||| || ||||| Sbjct 134564 AATCTATCCCCGAGTCCATTCGGGAAGTGTACAAGACAGTGTGGGAGATTCCTCAGCGTT 134623 Query 95375 TGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAGAGNNNNNNNNNNNNNN 95434 || | ||| ||||||| |||| || | ||| |||||||| Sbjct 134624 CCATTTTGGACATGGCGGCCGAACGCGCTCCTTACATTTGCCAGAGCCAGTCTTTGAATG 134683 Query 95435 NNNNNATGGCCGAGCCC-AGTCGCGGAAAAATAACGTCCATGTTGTTCTACGGGTGG-AG 95492 ||||||| ||| | ||| | || | || ||| || |||| ||| || Sbjct 134684 TGCACTTGGCCGAACCCGACTCGAAG-AAGTTGACCAGTATGCACTTTTACGCATGGAAG 134742 Query 95493 AAAGGGTCTCAAGACCGGTATGTATTATTTGCGAACCAGGCCAAAGGCGGACTCCATACA 95552 ||||| | | |||||||| ||||| |||||||| || | || ||||| ||| | || | Sbjct 134743 AAAGGAT-TGAAGACCGGAATGTACTATTTGCGCACTCGTCCCAAGGCAGACGCTATCAA 134801 Query 95553 GTTC 95556 |||| Sbjct 134802 GTTC 134805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494721375708200