Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq82 123 2e-23 seq226 114 1e-20 seq41 114 1e-20 seq232 111 2e-19 seq142 95.1 1e-14 seq67 95.1 1e-14 seq2 89.7 5e-13 seq120 86.0 6e-12 >seq82 Length=265081 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || ||||| ||||| || | ||| | | ||||||||||| ||||| ||||| Sbjct 263005 GCCACCGCGCAATCGCAAGACAAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCT 263064 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || ||| || ||||| | || || |||| | | || ||||| || ||||||||||| Sbjct 263065 CAAAGTGCGTCCATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGAGG 263124 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGT-TTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||| ||||| ||| | || || || | | || | ||||| | || ||| | Sbjct 263125 AATACCTTCCTTGTC-TTGAATCTTGGTCTTGACATTATCAATCGTGTCCGACGGCTCGA 263183 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 | |||| ||| | ||||| ||||||| ||||| ||||||||||| ||| Sbjct 263184 CATCGAGCGTAATAGTTTTTCCAGTCAAGGTTTTGACAAAAATCTGAATG 263233 >seq226 Length=603765 Score = 114 bits (126), Expect = 1e-20 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || || || | | |||||||| || ||||||||||||||| Sbjct 85626 CCACCGCGGAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 85685 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||||||| || || |||| | |||| | ||||||||| || || || Sbjct 85686 AACGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGA 85745 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| ||||| || | || || || | ||| || | |||||| | | ||| | Sbjct 85746 ATTCCTTCCTTGTC-CTGGATCTTGGTCTTGACGTTG-TCGATGGTGTCAGAGGGCTCAA 85803 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | |||| || | || || || |||| ||| || || ||||||||||| Sbjct 85804 CATCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 85852 Score = 114 bits (126), Expect = 1e-20 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || || || | | |||||||| || ||||||||||||||| Sbjct 85854 CCTCCGCGGAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 85913 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||||||| || || |||| | |||| | ||||||||| || || || Sbjct 85914 AACGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGA 85973 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| ||||| || | || || || | ||| || | |||||| | | ||| | Sbjct 85974 ATTCCTTCCTTGTC-CTGGATCTTGGTCTTGACGTTG-TCGATGGTGTCAGAGGGCTCAA 86031 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | |||| || | || || || |||| ||| || || ||||||||||| Sbjct 86032 CATCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 86080 >seq41 Length=265118 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || ||||| |||||||| | ||| | | ||||||||||| ||||| ||||| Sbjct 262725 GCCACCGCGCAATCGCAAAACGAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCT 262784 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || ||| || ||||| | || || |||| | | || ||||| || |||||||| || Sbjct 262785 CAAAGTGCGTCCATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGCGG 262844 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGT-TTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||| ||||| ||| | || || || | | || | ||||| | || ||| | Sbjct 262845 AATACCTTCCTTGTC-TTGAATCTTGGTCTTGACATTATCGATCGTGTCCGACGGCTCGA 262903 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 | |||| ||| | ||||| || |||| ||||| || |||||||| ||| Sbjct 262904 CATCGAGCGTAATAGTTTTGCCGGTCAAGGTTTTGACGAAAATCTGAATG 262953 >seq232 Length=134552 Score = 111 bits (122), Expect = 2e-19 Identities = 164/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTA---TGTTTGACTCCTTTTGAATGTTGTAGTCG 138444 || || ||||| |||| ||| | ||| | || || ||||||||||| ||||| ||| Sbjct 133043 CCACCGCGCAATCGCAGAACAAGATGCAAAGTGCTT---TCCTTTTGAATATTGTAATCG 133099 Query 138445 CTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGA 138504 || | ||| || || || | || ||||||| | | || ||||| || ||||||||| Sbjct 133100 CTTAAAGTGCGTCCATCTTCCAACTGCTTACCGGCAAAAATGAGACGTTGCTGGTCCGGA 133159 Query 138505 GGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCC 138564 || |||||||| ||||| |||||| || | | || | ||||| | || ||| Sbjct 133160 GGAATACCTTCCTTGTCTTGGATTTTGGTCTTGACATTATCGATCGTGTCCGACGGCTCG 133219 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || || | ||| | ||||| || |||| |||||| || |||||||| ||| Sbjct 133220 ACGTCAAGCGTAATAGTTTTTCCGGTCAAAGTTTTGACGAAAATCTGAATG 133270 >seq142 Length=241092 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | ||||||||| || || | | | || || |||||||| ||||| || ||| Sbjct 170317 CCACCTCGGAGACGCAAAACCAAGTGCAAGGTGGATTCTTTTTGAATATTGTAATCACTC 170376 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || | ||||||||||| | || | || ||||| ||||| || Sbjct 170377 AAAGTACGTCCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGA 170436 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| || | || || || | ||| || | || || | | ||| | Sbjct 170437 ATTCCCTCCTTGTC-TTGGATCTTGGTCTTGACGTTG-TCGATCGTATCCGAAGGCTCAA 170494 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 | || | || | || ||||| ||||| || ||||| ||||| |||||| Sbjct 170495 CGTCCAGGGTAATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCATG 170544 >seq67 Length=439500 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | ||||||||| || || | | | || || || ||||| ||||| || ||| Sbjct 2843 CCACCTCGAAGACGCAAAACCAAGTGCAAGGTAGATTCTTTCTGAATATTGTAATCACTC 2902 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || | ||||||||||| | || | || ||||| ||||| || Sbjct 2903 AACGTACGTCCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGA 2962 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| || | || || || | ||| || | ||||| | || ||| | Sbjct 2963 ATTCCCTCCTTGTC-TTGGATCTTGGTCTTGACGTTG-TCGATCGTGTCCGACGGCTCAA 3020 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 | || | || | || ||||| ||||| || ||||| ||||| |||||| Sbjct 3021 CGTCCAGGGTAATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCATG 3070 >seq2 Length=622807 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || ||||| || | ||| ||||| | | | || || || ||||||||||||||| | Sbjct 352848 CCACCACGCAATCGGAGAACCAAATGCAAGGTCGATTCTTTCTGAATGTTGTAGTCGGAC 352907 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || | ||||| |||| | || | ||||||||| |||||||| Sbjct 352908 AGTGTTCGACCATCTTCCAACTGTTTTCCGGCGAAAATCAAACGCTGTTGATCCGGAGGA 352967 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| ||| || || | | || | ||||| | || ||| || Sbjct 352968 ATTCCCTCCTTGTCCTGGATCTTGGTCTTGACATTATCGATAGTGTCAGACGGCTCGACA 353027 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| ||| | || ||||| |||| || ||||| || || ||||| Sbjct 353028 TCGAGCGTGATGGTCTTACCCGTCAAGGTCTTTACGAAGATTTGCAT 353074 >seq120 Length=609189 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || ||||| || | ||| ||||| | | | || || || || |||||||| ||| | Sbjct 562010 CCACCACGCAATCGGAGAACCAAATGCAAGGTCGATTCTTTCTGGATGTTGTAATCGGAC 561951 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || | ||||| |||| | || ||||||||||| |||||||| Sbjct 561950 AGTGTTCGACCATCTTCCAACTGTTTTCCGGCGAAAATCAGACGCTGTTGATCCGGAGGA 561891 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| ||| || || | | || | ||||| | || ||| || Sbjct 561890 ATTCCCTCCTTGTCCTGGATCTTGGTCTTGACATTATCGATAGTGTCAGACGGCTCGACA 561831 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| ||| | || ||||| |||| || ||||| || || ||||| Sbjct 561830 TCGAGCGTGATGGTCTTACCCGTCAAGGTCTTTACGAAGATTTGCAT 561784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496260570032400