Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq226 149 6e-31 seq67 134 1e-26 seq142 127 2e-24 seq2 125 7e-24 seq41 123 2e-23 seq120 122 8e-23 seq82 118 1e-21 seq232 114 1e-20 >seq226 Length=603765 Score = 149 bits (164), Expect = 6e-31 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||||||||| | ||||||||||| || | |||||||| || || || ||||| |||| Sbjct 85625 TCCACCGCGGAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCT 85684 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || |||||| || || ||||| ||||| || ||||||| ||||| ||||| || || Sbjct 85685 CAACGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGG 85744 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064 || || ||||||||| ||| || ||||| |||| |||| |||||| | ||| | Sbjct 85745 AATTCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTG-TCGATGGTGTCAGAGGGCTCAA 85803 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | |||| ||| | || || ||||||| ||| || || ||||||||||| Sbjct 85804 CATCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 85852 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| | ||||||||||| || | |||||||| || || || ||||| |||| | Sbjct 85854 CCTCCGCGGAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 85913 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| ||||| || ||||||| ||||| ||||| || || Sbjct 85914 AACGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGA 85973 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||||||| ||| || ||||| |||| |||| |||||| | ||| || Sbjct 85974 ATTCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTG-TCGATGGTGTCAGAGGGCTCAAC 86032 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | || || ||||||| ||| || || ||||||||||| Sbjct 86033 ATCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 86080 >seq67 Length=439500 Score = 134 bits (148), Expect = 1e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 126885 CTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGC 126944 ||||||| || | ||||| ||||| || | ||||| ||||| |||||||||||||| | Sbjct 2841 CTCCACCTCGAAGACGCAAAACCAAGTGCAAGGTAGATTCTTTCTGAATATTGTAATCAC 2900 Query 126945 CCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAG 127004 || ||| || ||| || | ||||| || ||| | |||||||| || ||||| || | Sbjct 2901 TCAACGTACGTCCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGG 2960 Query 127005 GTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCG 127063 | || ||||||||||| ||| || ||||| |||| |||| ||||||| ||| Sbjct 2961 GAATTCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTG-TCGATCGTGTCCGACGGCTCA 3019 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || || | ||| | || || || ||||| || ||||| ||||| |||||| Sbjct 3020 ACGTCCAGGGTAATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCATG 3070 >seq142 Length=241092 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||| ||||| || | || || |||||||||||||||||||| | | Sbjct 170317 CCACCTCGGAGACGCAAAACCAAGTGCAAGGTGGATTCTTTTTGAATATTGTAATCACTC 170376 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || | ||||| || ||| | |||||||| || ||||| || || Sbjct 170377 AAAGTACGTCCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGA 170436 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || ||||||||||| ||| || ||||| |||| |||| || |||| | ||| || Sbjct 170437 ATTCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTG-TCGATCGTATCCGAAGGCTCAAC 170495 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | ||| | || || || ||||| || ||||| ||||| |||||| Sbjct 170496 GTCCAGGGTAATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCATG 170544 >seq2 Length=622807 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || ||||| | |||||||| | || || ||||| ||||| ||||| ||| | Sbjct 352848 CCACCACGCAATCGGAGAACCAAATGCAAGGTCGATTCTTTCTGAATGTTGTAGTCGGAC 352907 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || | ||||||||| ||| | ||||| ||||| ||||| ||||| Sbjct 352908 AGTGTTCGACCATCTTCCAACTGTTTTCCGGCGAAAATCAAACGCTGTTGATCCGGAGGA 352967 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| || ||||| | |||| ||||| | |||||| Sbjct 352968 ATTCCCTCCTTGTCCTGGATCTTGGTCTTGACATTATCGATAGTGTCAGACGGCTCGACA 353027 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || || || |||| || ||||| || || ||||| Sbjct 353028 TCGAGCGTGATGGTCTTACCCGTCAAGGTCTTTACGAAGATTTGCAT 353074 >seq41 Length=265118 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| |||||||| || | ||| | ||| || ||||||||||||||||||| | Sbjct 262726 CCACCGCGCAATCGCAAAACGAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTC 262785 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || | ||| ||||| || | || | || ||||| || || || Sbjct 262786 AAAGTGCGTCCATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGCGGA 262845 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || |||||||| || || ||||| | |||| ||||||| |||||| Sbjct 262846 ATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTATCGATCGTGTCCGACGGCTCGACA 262905 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 |||| || | ||||||||||||| ||||| || |||||||| ||| Sbjct 262906 TCGAGCGTAATAGTTTTGCCGGTCAAGGTTTTGACGAAAATCTGAATG 262953 >seq120 Length=609189 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || ||||| | |||||||| | || || ||||| || || ||||||||| | Sbjct 562010 CCACCACGCAATCGGAGAACCAAATGCAAGGTCGATTCTTTCTGGATGTTGTAATCGGAC 561951 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || | ||||||||| ||| | |||| ||||| ||||| ||||| Sbjct 561950 AGTGTTCGACCATCTTCCAACTGTTTTCCGGCGAAAATCAGACGCTGTTGATCCGGAGGA 561891 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| || ||||| | |||| ||||| | |||||| Sbjct 561890 ATTCCCTCCTTGTCCTGGATCTTGGTCTTGACATTATCGATAGTGTCAGACGGCTCGACA 561831 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || || || |||| || ||||| || || ||||| Sbjct 561830 TCGAGCGTGATGGTCTTACCCGTCAAGGTCTTTACGAAGATTTGCAT 561784 >seq82 Length=265081 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| |||||||| || | ||| | ||| || ||||||||||||||||||| | Sbjct 263006 CCACCGCGCAATCGCAAGACAAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTC 263065 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || | ||| ||||| || | || | || ||||| || ||||| Sbjct 263066 AAAGTGCGTCCATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGAGGA 263125 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || |||||||| || || ||||| | || | ||||||| |||||| Sbjct 263126 ATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTATCAATCGTGTCCGACGGCTCGACA 263185 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 |||| || | ||||| || |||| ||||| ||||||||||| ||| Sbjct 263186 TCGAGCGTAATAGTTTTTCCAGTCAAGGTTTTGACAAAAATCTGAATG 263233 >seq232 Length=134552 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| ||||||| || | ||| | || || ||||||||||||||||||| Sbjct 133043 CCACCGCGCAATCGCAGAACAAGATGCAAAGTGCTTTCCTTTTGAATATTGTAATCGCTT 133102 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || | ||| || || || | || | || ||||| || ||||| Sbjct 133103 AAAGTGCGTCCATCTTCCAACTGCTTACCGGCAAAAATGAGACGTTGCTGGTCCGGAGGA 133162 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || |||||||| |||||| ||||| | |||| ||||||| |||||| Sbjct 133163 ATACCTTCCTTGTCTTGGATTTTGGTCTTGACATTATCGATCGTGTCCGACGGCTCGACG 133222 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | || | ||||| ||||||| |||||| || |||||||| ||| Sbjct 133223 TCAAGCGTAATAGTTTTTCCGGTCAAAGTTTTGACGAAAATCTGAATG 133270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475499046590800