Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq226 120 7e-22 seq120 116 9e-21 seq82 114 3e-20 seq2 111 4e-19 seq41 105 2e-17 seq232 100 7e-16 seq142 89.7 1e-12 seq67 89.7 1e-12 >seq226 Length=603765 Score = 120 bits (132), Expect = 7e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| ||||| |||||||| |||| ||||||||| ||| || | || || || ||||| Sbjct 85649 GTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAACGTGCGGCCGTCCTCGAGCTG 85708 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||||||||| ||||| | |||||| || || || ||||||||| ||||| ||||| Sbjct 85709 CTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGAATTCCTTCCTTGTCCTGGATCTT 85768 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| ||| |||| |||||| | | || ||||| | ||||| ||||| || || Sbjct 85769 GGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACATCGAGGGTGATGGTCTTTCCGGT 85828 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 | ||| || || ||||| || Sbjct 85829 CAAAGTCTTGACGAAAATCTG 85849 Score = 120 bits (132), Expect = 7e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| ||||| |||||||| |||| ||||||||| ||| || | || || || ||||| Sbjct 85877 GTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAACGTGCGGCCGTCCTCGAGCTG 85936 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||||||||| ||||| | |||||| || || || ||||||||| ||||| ||||| Sbjct 85937 CTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGAATTCCTTCCTTGTCCTGGATCTT 85996 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| ||| |||| |||||| | | || ||||| | ||||| ||||| || || Sbjct 85997 GGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACATCGAGGGTGATGGTCTTTCCGGT 86056 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 | ||| || || ||||| || Sbjct 86057 CAAAGTCTTGACGAAAATCTG 86077 >seq120 Length=609189 Score = 116 bits (128), Expect = 9e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 ||||| || || |||| |||||| || | || || | |||||||||| ||| |||||| Sbjct 561980 GTCGATTCTTTCTGGATGTTGTAATCGGACAGTGTTCGACCATCTTCCAACTGTTTTCCG 561921 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 ||||| || |||||||| || |||||| |||||| || ||||| ||||| ||| Sbjct 561920 GCGAAAATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCCTGGATCTTGGTCTTG 561861 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 || |||| ||||| | | || ||||| | |||||| ||||||||||| | || Sbjct 561860 ACATTATCGATAGTGTCAGACGGCTCGACATCGAGCGTGATGGTCTTACCCGTCAAGGTC 561801 Query 199613 TTCACAAAAATTTG 199626 || || || ||||| Sbjct 561800 TTTACGAAGATTTG 561787 >seq82 Length=265081 Score = 114 bits (126), Expect = 3e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 || || |||||| || | ||| |||||||| | ||||| || |||||| | ||| Sbjct 263017 TCGCAAGACAAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTCAAAGTGCGTCC 263076 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||| |||| |||||||||||| || |||||||| |||||||||||| ||| ||||| Sbjct 263077 ATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTT 263136 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || |||||||| ||| || || | ||||| | | || ||||| | ||| || Sbjct 263137 GTCTTGAATCTTGGTCTTGACATTATCAATCGTGTCCGACGGCTCGACATCGAGCGTAAT 263196 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || | ||||| |||||||| || Sbjct 263197 AGTTTTTCCAGTCAAGGTTTTGACAAAAATCTG 263229 >seq2 Length=622807 Score = 111 bits (122), Expect = 4e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 ||||| || || || | ||||||||| | || || | |||||||||| ||| |||||| Sbjct 352878 GTCGATTCTTTCTGAATGTTGTAGTCGGACAGTGTTCGACCATCTTCCAACTGTTTTCCG 352937 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 ||||| || | |||||| || |||||| |||||| || ||||| ||||| ||| Sbjct 352938 GCGAAAATCAAACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCCTGGATCTTGGTCTTG 352997 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 || |||| ||||| | | || ||||| | |||||| ||||||||||| | || Sbjct 352998 ACATTATCGATAGTGTCAGACGGCTCGACATCGAGCGTGATGGTCTTACCCGTCAAGGTC 353057 Query 199613 TTCACAAAAATTTG 199626 || || || ||||| Sbjct 353058 TTTACGAAGATTTG 353071 >seq41 Length=265118 Score = 105 bits (116), Expect = 2e-17 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 |||||||| | ||||| || |||||| | |||||| |||| |||||||||||| || Sbjct 262762 TCCTTTTGAATATTGTAATCGCTCAAAGTGCGTCCATCCTCCAACTGCTTTCCGGCAAAA 262821 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 |||||||| ||||||||||| ||| ||||| || |||||||| ||| || Sbjct 262822 ATGAGACGTTGCTGGTCCGGCGGAATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTA 262881 Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618 |||| ||||| | | || ||||| | ||| || || || || || | ||||| || Sbjct 262882 TCGATCGTGTCCGACGGCTCGACATCGAGCGTAATAGTTTTGCCGGTCAAGGTTTTGACG 262941 Query 199619 AAAATTTG 199626 ||||| || Sbjct 262942 AAAATCTG 262949 >seq232 Length=134552 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 || ||| ||||| || | ||| |||||||| | ||||| || ||||| | ||| Sbjct 133054 TCGCAGAACAAGATGCAAAGTGCTTTCCTTTTGAATATTGTAATCGCTTAAAGTGCGTCC 133113 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| |||||| ||||| || |||||||| |||||||||||| ||| ||||| Sbjct 133114 ATCTTCCAACTGCTTACCGGCAAAAATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTT 133173 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || || || ||| || |||| ||||| | | || || || | ||| || Sbjct 133174 GTCTTGGATTTTGGTCTTGACATTATCGATCGTGTCCGACGGCTCGACGTCAAGCGTAAT 133233 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || | |||||| || ||||| || Sbjct 133234 AGTTTTTCCGGTCAAAGTTTTGACGAAAATCTG 133266 >seq142 Length=241092 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 || || || ||||| | ||||| ||| |||||| | ||||||||||| || || ||| Sbjct 170347 GTGGATTCTTTTTGAATATTGTAATCACTCAAAGTACGTCCATCTTCCAATTGTTTACCG 170406 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 ||||| || | || || || ||||| |||||| || || || ||||| ||| Sbjct 170407 GCGAAAATCAATCGTTGTTGATCCGGGGGAATTCCCTCCTTGTCTTGGATCTTGGTCTTG 170466 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 ||| |||| || || | | || || |||| || || ||||||||||| || || Sbjct 170467 ACGTTGTCGATCGTATCCGAAGGCTCAACGTCCAGGGTAATGGTCTTACCCGTCAGTGTC 170526 Query 199613 TTCACAAAAATTTG 199626 || || |||||||| Sbjct 170527 TTTACGAAAATTTG 170540 >seq67 Length=439500 Score = 89.7 bits (98), Expect = 1e-12 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 |||||| | || || | ||| | || || || || || | ||||| ||| ||| || Sbjct 2848 TCGAAGACGCAAAACCAAGTGCAAGGTAGATTCTTTCTGAATATTGTAATCACTCAACGT 2907 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | ||||||||||| || || |||||||| || | || || || ||||| |||||| Sbjct 2908 ACGTCCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGAATTCC 2967 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 || || || ||||| ||| ||| |||| ||||| | | || || |||| Sbjct 2968 CTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGGCTCAACGTCCAG 3027 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||||||||| || || || || |||||||| Sbjct 3028 GGTAATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTG 3066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178917144044765