Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq226 116 4e-21 seq2 113 5e-20 seq120 109 6e-19 >seq226 Length=603765 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| | | ||||||||||| || | ||| |||||| ||||| ||||||||| Sbjct 85854 CCTCCGCGGAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 85913 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | ||||| |||| ||||||||||| ||||| || ||||| ||||| || || | ||| Sbjct 85914 AACGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGA 85973 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | | ||||||||| |||||| |||||| ||| | | | ||||| | || || Sbjct 85974 ATTCCTTCCTTGTCCTGGATCTTGGTCTTGA-CGTTGTCGATGGTGTCAGAGGGCTCAAC 86032 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| | |||||||| || || |||| || || || || || ||||| Sbjct 86033 ATCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 86080 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||||||||| || | ||| |||||| ||||| ||||||||| | ||||| | Sbjct 85637 ACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAACGTGCGGCC 85696 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| ||||||||||| ||||| || ||||| ||||| || || | ||| | | ||||| Sbjct 85697 GTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGAATTCCTTCCTT 85756 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| |||||| |||||| ||| | | | ||||| | || ||||| | |||| Sbjct 85757 GTCCTGGATCTTGGTCTTGA-CGTTGTCGATGGTGTCAGAGGGCTCAACATCGAGGGTGA 85815 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| || || |||| || || || || || ||||| Sbjct 85816 TGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 85852 >seq2 Length=622807 Score = 113 bits (124), Expect = 5e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| |||||| || || || || || ||||||||||| || || || | || || Sbjct 352866 ACCAAATGCAAGGTCGATTCTTTCTGAATGTTGTAGTCGGACAGTGTTCGACCATCTTCC 352925 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 | ||| || |||||||| ||||| ||||| || || | || | | |||||||||| | Sbjct 352926 AACTGTTTTCCGGCGAAAATCAAACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCCTGG 352985 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| |||||| | | | ||||| || || ||||| | ||||||||| || Sbjct 352986 ATCTTGGTCTTGACATTATCGATAGTGTCAGACGGCTCGACATCGAGCGTGATGGTCTTA 353045 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 ||||||| || || || |||||||||||| Sbjct 353046 CCCGTCAAGGTCTTTACGAAGATTTGCATT 353075 >seq120 Length=609189 Score = 109 bits (120), Expect = 6e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| |||||| || || || ||||| ||||| ||||| || || || | || || Sbjct 561992 ACCAAATGCAAGGTCGATTCTTTCTGGATGTTGTAATCGGACAGTGTTCGACCATCTTCC 561933 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 | ||| || |||||||| |||| ||||| || || | || | | |||||||||| | Sbjct 561932 AACTGTTTTCCGGCGAAAATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCCTGG 561873 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| |||||| | | | ||||| || || ||||| | ||||||||| || Sbjct 561872 ATCTTGGTCTTGACATTATCGATAGTGTCAGACGGCTCGACATCGAGCGTGATGGTCTTA 561813 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 ||||||| || || || |||||||||||| Sbjct 561812 CCCGTCAAGGTCTTTACGAAGATTTGCATT 561783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565236315683400