Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq43 89.7 6e-13 seq235 86.0 7e-12 >seq43 Length=376587 Score = 89.7 bits (98), Expect = 6e-13 Identities = 125/172 (73%), Gaps = 4/172 (2%) Strand=Plus/Minus Query 154650 GGTGAGTATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGG--ATCAGGAGATGATA 154707 ||||| ||||| || ||||| || ||| || ||| | || ||| || || | | Sbjct 345204 GGTGAATATGCCGGTCTGTTGGCCATCACTGCGTACT-TGGAGTCCATC-GGCGAAGGTC 345147 Query 154708 AAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCA 154767 | ||||| || ||| | || || |||| || || ||||| |||||||| |||||||||| Sbjct 345146 ACAGAAACGTGTGTCTCATTCCCAAGTCGGCTCACGGAACCAATCCTGCAAGTGCTGTCA 345087 Query 154768 TGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGA 154819 ||||||| ||||| ||||| | || || |||||| |||| ||||| || Sbjct 345086 TGGCAGGTATGAAGGTTGTCGTCGTTGAGAATGATGACAATGGAAACATCGA 345035 >seq235 Length=297710 Score = 86.0 bits (94), Expect = 7e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 154710 AGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATG 154769 ||||| || ||| | || ||| |||| || || ||||| |||||||| |||||||||||| Sbjct 66576 AGAAACGTGTGTCTCATTCCAAAGTCGGCTCACGGAACCAATCCTGCAAGTGCTGTCATG 66635 Query 154770 GCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGA 154819 ||||| ||||| ||||| | || | |||||| |||| ||||| || Sbjct 66636 GCAGGTATGAAGGTTGTGGTCGTTGAAAATGATGACAATGGAAACATCGA 66685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579210664152800