Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq232 161 2e-34 seq142 152 1e-31 seq82 140 7e-28 seq67 136 9e-27 seq226 134 3e-26 seq41 131 4e-25 >seq232 Length=134552 Score = 161 bits (178), Expect = 2e-34 Identities = 160/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 || || |||||| || | |||| || |||||||||||||||||| | ||| | || Sbjct 133054 TCGCAGAACAAGATGCAAAGTGCTTTCCTTTTGAATATTGTAATCGCTTAAAGTGCGTCC 133113 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 |||||| | ||||||||| || || || || ||||| ||||| |||||||| ||||| || Sbjct 133114 ATCTTCCAACTGCTTACCGGCAAAAATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTT 133173 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 |||||| ||||| |||||| || || || |||||||| || || ||||| |||| Sbjct 133174 GTCTTGGATTTTGGTCTTGACATTATCGATCGTGTCCGACGGCTCGACGTCAAGCGTAAT 133233 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || ||||| ||||||||||| ||||| Sbjct 133234 AGTTTTTCCGGTCAAAGTTTTGACGAA 133260 >seq142 Length=241092 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 || ||| | |||||| | ||| | ||||| |||||||||||||||||||| | ||| Sbjct 170322 TCGGAGACGCAAAACCAAGTGCAAGGTGGATTCTTTTTGAATATTGTAATCACTCAAAGT 170381 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| | || ||||| ||||| || | ||||||||| || || ||||| || Sbjct 170382 ACGTCCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGAATTCC 170441 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || |||||||| || || ||||||||| || || || |||||| || || || || Sbjct 170442 CTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTATCCGAAGGCTCAACGTCCAG 170501 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| || |||| || |||||||| | |||||| Sbjct 170502 GGTAATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCAT 170543 >seq82 Length=265081 Score = 140 bits (154), Expect = 7e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 || ||| ||||| || | ||| || |||||||||||||||||| | ||| | || Sbjct 263017 TCGCAAGACAAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTCAAAGTGCGTCC 263076 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 ||| || | |||||| || || || || || ||||| ||||| |||||||| ||||| || Sbjct 263077 ATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTT 263136 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 ||||||||| || |||||| || ||||| |||||||| || || || || |||| Sbjct 263137 GTCTTGAATCTTGGTCTTGACATTATCAATCGTGTCCGACGGCTCGACATCGAGCGTAAT 263196 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || ||||| ||||| ||||| || || Sbjct 263197 AGTTTTTCCAGTCAAGGTTTTGACAAA 263223 >seq67 Length=439500 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 |||||| | ||| | || || ||||| |||||||||||||| | || | ||||| Sbjct 2857 CAAAACCAAGTGCAAGGTAGATTCTTTCTGAATATTGTAATCACTCAACGTACGTCCATC 2916 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| | || ||||| ||||| || | ||||||||| || || ||||| || || ||||| Sbjct 2917 TTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGAATTCCCTCCTTGTC 2976 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||| || || ||||||||| || || |||||||| || || || ||||||| || Sbjct 2977 TTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGGCTCAACGTCCAGGGTAATGGT 3036 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || |||| || |||||||| | |||||| Sbjct 3037 CTTACCCGTCAGTGTCTTTACGAAAATTTGCAT 3069 >seq226 Length=603765 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||| | ||| || | ||||||||| ||||| || || || ||||| ||| | || | Sbjct 85634 GAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAACGTGCG 85693 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 || || ||||||||||| || || ||||| | || ||||| || || ||||| ||||| Sbjct 85694 GCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGAATTCCTTC 85753 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 ||||| || || || ||||||||| || |||||||| || || || || ||||| Sbjct 85754 CTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACATCGAGGGT 85813 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | |||||||| |||||||| || ||||| | ||||| Sbjct 85814 GATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 85852 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||| | ||| || | ||||||||| ||||| || || || ||||| ||| | || | Sbjct 85862 GAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAACGTGCG 85921 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 || || ||||||||||| || || ||||| | || ||||| || || ||||| ||||| Sbjct 85922 GCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGAATTCCTTC 85981 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 ||||| || || || ||||||||| || |||||||| || || || || ||||| Sbjct 85982 CTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACATCGAGGGT 86041 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | |||||||| |||||||| || ||||| | ||||| Sbjct 86042 GATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 86080 >seq41 Length=265118 Score = 131 bits (144), Expect = 4e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 || |||||| || || | ||| || |||||||||||||||||| | ||| | || Sbjct 262737 TCGCAAAACGAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTCAAAGTGCGTCC 262796 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 ||| || | |||||| || || || || || ||||| ||||| || ||||| ||||| || Sbjct 262797 ATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGCGGAATACCTTCCTT 262856 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 ||||||||| || |||||| || || || |||||||| || || || || |||| Sbjct 262857 GTCTTGAATCTTGGTCTTGACATTATCGATCGTGTCCGACGGCTCGACATCGAGCGTAAT 262916 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || || || ||||| ||||| ||||| Sbjct 262917 AGTTTTGCCGGTCAAGGTTTTGACGAA 262943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109477406506265