Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq2 100 2e-16 seq226 96.9 2e-15 seq120 96.9 2e-15 seq142 91.5 1e-13 seq67 91.5 1e-13 seq41 89.7 3e-13 seq82 86.0 4e-12 >seq2 Length=622807 Score = 100 bits (110), Expect = 2e-16 Identities = 152/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||| || | || ||||||||||||||| ||||| || || |||| |||| || Sbjct 352865 AACCAAATGCAAGGTCGATTCTTTCTGAATGTTGTAGTCGGACAGTGTTCGACCATCTTC 352924 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || |||||||||||| || || | || || || || | || | ||||||||||| Sbjct 352925 CAACTGTTTTCCGGCGAAAATCAAACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCCTG 352984 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947 ||||| ||||| || ||||||| ||| | ||| ||||||| || |||| Sbjct 352985 GATCTTGGTCTTGAC--AT--TATCGATAGTGTCAGACGGCTCGACATCGAGCGTGATGG 353040 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || ||||| | ||||| || ||||| ||||| Sbjct 353041 TCTTACCCGTCAAGGTCTTTACGAAGATTTGCAT 353074 >seq226 Length=603765 Score = 96.9 bits (106), Expect = 2e-15 Identities = 152/215 (71%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC-CGAAAGGCTTCGTTCAT 34827 ||| |||||||||| || || ||||| ||||| ||||| | || | | || | | Sbjct 85640 CAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAACG-TGCGGCCGT 85698 Query 34828 CATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGT 34887 | || ||||| ||||||||||| || | || || || || |||| | || ||||||| Sbjct 85699 CCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGAATTCCTTCCTTGT 85758 Query 34888 CGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGG 34947 | ||||| |||||| | || | ||| || ||||||||||| ||| |||| Sbjct 85759 CCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACATCGAGGGTGATGG 85818 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | ||||| || | |||||| || || ||||||||| Sbjct 85819 TCTTTCCGGTCAAAGTCTTGACGAAAATCTGCATA 85853 Score = 95.1 bits (104), Expect = 8e-15 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC-CGAAAGGCTTCGTTCAT 34827 ||| |||||||||| || || ||||| ||||| ||||| | || | | || | | Sbjct 85868 CAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAACG-TGCGGCCGT 85926 Query 34828 CATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGT 34887 | || ||||| ||||||||||| || | || || || || |||| | || ||||||| Sbjct 85927 CCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGAATTCCTTCCTTGT 85986 Query 34888 CGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGG 34947 | ||||| |||||| | || | ||| || ||||||||||| ||| |||| Sbjct 85987 CCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACATCGAGGGTGATGG 86046 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | ||||| || | |||||| || || |||||||| Sbjct 86047 TCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 86080 >seq120 Length=609189 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||| || | || ||||||||| ||||| || || || || |||| |||| || Sbjct 561993 AACCAAATGCAAGGTCGATTCTTTCTGGATGTTGTAATCGGACAGTGTTCGACCATCTTC 561934 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || |||||||||||| || || || || || || || | || | ||||||||||| Sbjct 561933 CAACTGTTTTCCGGCGAAAATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCCTG 561874 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947 ||||| ||||| || ||||||| ||| | ||| ||||||| || |||| Sbjct 561873 GATCTTGGTCTTGAC--AT--TATCGATAGTGTCAGACGGCTCGACATCGAGCGTGATGG 561818 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || ||||| | ||||| || ||||| ||||| Sbjct 561817 TCTTACCCGTCAAGGTCTTTACGAAGATTTGCAT 561784 >seq142 Length=241092 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC-CGAAAGGCTTCGTTCAT 34827 |||||||||||| | ||| |||||| ||||| || || || | || | | ||| ||| Sbjct 170331 CAAAACCAAGTGCAAGGTGGATTCTTTTTGAATATTGTAATCACTCAAAG-TACGTCCAT 170389 Query 34828 CATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGT 34887 | |||| ||||| ||||| || || | |||||| || || | || | |||||||||| Sbjct 170390 CTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGAATTCCCTCCTTGT 170449 Query 34888 CGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGG 34947 | ||||| |||||| | |||| || | |||||| || | ||| |||| Sbjct 170450 CTTGGATCTTGGTCTTGACGTTGTCGATCGTATCCGAAGGCTCAACGTCCAGGGTAATGG 170509 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || ||||| || ||||| || || || ||||| Sbjct 170510 TCTTACCCGTCAGTGTCTTTACGAAAATTTGCAT 170543 >seq67 Length=439500 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC-CGAAAGGCTTCGTTCAT 34827 |||||||||||| | || |||||||||||| || || || | || | | ||| ||| Sbjct 2857 CAAAACCAAGTGCAAGGTAGATTCTTTCTGAATATTGTAATCACTCAACG-TACGTCCAT 2915 Query 34828 CATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGT 34887 | |||| ||||| ||||| || || | |||||| || || | || | |||||||||| Sbjct 2916 CTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGAATTCCCTCCTTGT 2975 Query 34888 CGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGG 34947 | ||||| |||||| | |||| || | |||||| || | ||| |||| Sbjct 2976 CTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGGCTCAACGTCCAGGGTAATGG 3035 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || ||||| || ||||| || || || ||||| Sbjct 3036 TCTTACCCGTCAGTGTCTTTACGAAAATTTGCAT 3069 >seq41 Length=265118 Score = 89.7 bits (98), Expect = 3e-13 Identities = 163/232 (70%), Gaps = 10/232 (4%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC-CGA 34813 || || | ||| | |||||| | || | || ||||| || ||||| || || || | Sbjct 262726 CCACCGCGCAATCGCAAAACGAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTC 262785 Query 34814 AAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGG 34873 || | | ||| |||| |||| ||| ||||||||||| || || ||||||||||| |||| Sbjct 262786 AAAG-TGCGTCCATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGCGG 262844 Query 34874 CACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCT 34929 | || |||||||| |||||| ||||| || ||||||| | ||| | || Sbjct 262845 AATACCTTCCTTGTCTTGAATCTTGGTCTTGAC--AT--TATCGATCGTGTCCGACGGCT 262900 Query 34930 CAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | ||||||| || || ||||| || || | || || || || ||||| || Sbjct 262901 CGACATCGAGCGTAATAGTTTTGCCGGTCAAGGTTTTGACGAAAATCTGAAT 262952 >seq82 Length=265081 Score = 86.0 bits (94), Expect = 4e-12 Identities = 144/202 (71%), Gaps = 10/202 (5%) Strand=Plus/Plus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTC-CGAAAGGCTTCGTTCATCATCCAGCTGTTTTCC 34843 || ||||| || ||||| || || || | || | | ||| |||| |||| ||| ||||| Sbjct 263036 GTACTTTCCTTTTGAATATTGTAATCGCTCAAAG-TGCGTCCATCCTCCAACTGCTTTCC 263094 Query 34844 GGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTT 34903 |||||| || || ||||||||||| | || | || |||||||| |||||| || Sbjct 263095 GGCAAAAATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTTGTCTTGAATCTTGGTCTT 263154 Query 34904 GACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGA 34959 ||| || |||| || | ||| | ||| ||||||| || || |||||||| || | Sbjct 263155 GAC--AT--TATCAATCGTGTCCGACGGCTCGACATCGAGCGTAATAGTTTTTCCAGTCA 263210 Query 34960 GAGTCTTCACAAAGATCTGCAT 34981 || || ||||| ||||| || Sbjct 263211 AGGTTTTGACAAAAATCTGAAT 263232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632432840760