Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq194 176 5e-39 seq98 152 6e-32 seq208 120 3e-22 seq120 93.3 5e-14 seq103 91.5 2e-13 >seq194 Length=282305 Score = 176 bits (194), Expect = 5e-39 Identities = 381/566 (67%), Gaps = 8/566 (1%) Strand=Plus/Plus Query 18953 ACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAA 19012 ||| |||||| |||||||||||||| || || ||||| | ||| ||||||||||| |||| Sbjct 115790 ACAACAAACAGGCAAAATCACAATGCAGACCTTCGTCGCGACTGATCAATTCATTGGAAA 115849 Query 19013 ATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAG 19072 | | ||| ||||| || || | ||| || | |||||| || | | || || || | Sbjct 115850 AGCAGAGACCGGGCATAAGACCCCGTTTCTTGAGCCAGAAAATGGCACAGAACGAGCCGG 115909 Query 19073 AAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCAT 19132 ||||||| || ||||| || || ||||| || || | ||| || | ||||| | Sbjct 115910 AAAAGAAAATGCCTTCGACGGCCGCAAATGCGACGCAACGTTCGGCAAAGGAAGCATGGT 115969 Query 19133 TATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTA 19192 | | | ||||| || ||||| | |||||||||| |||||| || | || || | Sbjct 115970 TGGCGTCACACCATTGCAAGGCCCAGTTGGCCTTCTTTTGTACACACGGGACCGTATCAA 116029 Query 19193 T----AGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAAT 19248 | | | |||| ||| | | || | | || || || | ||| || | | Sbjct 116030 TGGCCCGCAACAAAT-GAT-CTT--TTTCCTTGGGGTCACGAATGTAGGTATCAATGAGT 116085 Query 19249 AAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTT 19308 || |||| | || |||||| ||||| | || || || ||||| |||||||| | Sbjct 116086 AACGAGTACGTCTCACTATGAATGTTTTCGACGGCAATTTGGAATCCATAAAAACAGCGG 116145 Query 19309 GCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCA 19368 ||||||| | || | ||| ||||||| ||| ||||||||||||| || || || Sbjct 116146 GCTTCTGGTGATTGAATTTCGGTACAAAAGTTTTGCGCCAAATTTTCATTCACAATACCG 116205 Query 19369 TCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAAT 19428 || || ||||| || || || || ||| | ||| ||| ||| | || || Sbjct 116206 TCCGAGGCGGCAAAGAACGCCAAAACGTGTGACACAAAGTGTCGTTCGTTGCTGGACAAA 116265 Query 19429 GTATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCC 19488 | |||||||| | | ||| | | ||||| | |||||| | ||||| |||||||| Sbjct 116266 TTCTTCCAATCTTGCAAATCACTGGCCAAATCAATTTCTTCGGCCGTCCAGAAAGAAGCT 116325 Query 19489 TCTGCTTTTTTATACATGTTCCATAT 19514 || |||||||| ||||| | ||| || Sbjct 116326 TCGGCTTTTTTGTACATTTGCCAGAT 116351 >seq98 Length=427084 Score = 152 bits (168), Expect = 6e-32 Identities = 374/561 (67%), Gaps = 12/561 (2%) Strand=Plus/Plus Query 18960 ACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAA 19019 ||| |||||||||||||| || || ||||| | ||| |||||||| || ||||| | Sbjct 135036 ACAGGCAAAATCACAATGCAGACCTTCGTCGCGACTAATCAATTCGTTGGAAAAGCAAAG 135095 Query 19020 ACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAA 19079 ||| ||||| || || | ||| || | ||| || || | | ||| || || |||||||| Sbjct 135096 ACCGGGCATGAGACCCCGTTTCTTGAGCCAAAAAATGGCACAAAAGGAACCGGAAAAGAA 135155 Query 19080 TATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATG 19139 || ||||| || || ||||| || || | ||| || | ||| | || | Sbjct 135156 AATGCCTTCGACGGCCGCAAAGGCGACACAGCGTTCCGCAAAGGAAGCGTTGTTCGCGTC 135215 Query 19140 AATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTAT----AG 19195 | ||||| || ||||||| |||||||||| |||||| || | || || || | Sbjct 135216 ACACCATTGCAAGGCCCAATGGGCCTTCTTTTGTACACACGGAACCGTATCAATGGCCCG 135275 Query 19196 AATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGT 19255 | |||| ||| | | ||| | | ||| || || | ||| ||||| | | | Sbjct 135276 CAACAAAT-GATCCTT---CTCTTTCGGATCGCGAATGTACGTATCAATCAAAAGAGAAT 135331 Query 19256 ACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTG 19315 | |||| ||||| ||||| | || || || |||||||||||||| | ||||| | Sbjct 135332 AGGTTTCGCTGTGAATGTTTTCGACGGCAATTTGGAATCCGTAAAAACAACGGGCTTCCG 135391 Query 19316 TTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAG 19375 || | ||| ||||||| ||| ||||||||||||| || || || || | Sbjct 135392 GCGATTGAATTTCGGTACAAAAGTTTTGTGCCAAATTTTCATTCACAATGCCGTCGGACG 135451 Query 19376 CTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCAT--CTGAGGTTAATGTATT 19433 | ||||| || || || || || | ||| || ||| | || | ||||| || Sbjct 135452 CGGCAAAGAACGCCAACACGTGCGACACAAAGTGACGTTCGTTGCT-CGACAAATGT-TT 135509 Query 19434 CCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGC 19493 |||||| | | ||| | | | ||| | |||||| | |||||||| ||||| || || Sbjct 135510 CCAATCTTGCAAATCACTGGCGAGATCAATTTCTTCGGCCGTCCAAAAGGAAGCTTCGGC 135569 Query 19494 TTTTTTATACATGTTCCATAT 19514 |||||| ||||| | ||| || Sbjct 135570 TTTTTTGTACATTTGCCAGAT 135590 >seq208 Length=180812 Score = 120 bits (132), Expect = 3e-22 Identities = 378/581 (65%), Gaps = 15/581 (3%) Strand=Plus/Minus Query 18961 CATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAA 19020 || ||||| ||| || ||||| || || | ||| || | ||||||| ||| || ||| Sbjct 73056 CAGGCAAACGAACAGTGCAGTCCTTCATCGCGACTAATGAGTTCATTACTAAACGTCAAA 72997 Query 19021 CCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAAT 19080 || |||||||| |||| ||| || | ||| || || | | ||| | ||| |||||||| Sbjct 72996 CCGGGCATCAGCCCTCGTTTCTTGAGCCAAAAGATGGCACAAAAAGCTCCCGAAAAGAAG 72937 Query 19081 ATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGA 19140 || ||||| || || ||||| || || | | ||| || | || || || Sbjct 72936 ATCCCTTCCACGGCCGCAAAGGCCACCAACCGTTCCGCAAAGGAGGCTTCC-------GA 72884 Query 19141 ATCCATTT----CAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATA-G 19195 | | || | | ||||||| | || ||| |||| || | | | ||| | Sbjct 72883 ACCAATATACCGCTGTGCCCAGGCCGCTTTCCGACGGACACTGGGTACT-TGGGTATGCG 72825 Query 19196 AATTAAATAGATACATA-CGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTG 19254 ||| || ||| | || || || || ||| || | ||| || | | || | Sbjct 72824 CCGCAAAGAG-TACTTGTCGATCGGATGGATTGGTAATGTACGTATCAATAAGAAGACAG 72766 Query 19255 TACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCT 19314 || ||||| |||||| |||| || ||||| || ||||| |||||||| | ||||| Sbjct 72765 TAGGTTTCTTGATGAATGCTTTCCATGGCCATTTGGAATCCATAAAAACAGCGGGCTTCC 72706 Query 19315 GTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTA 19374 | | | ||||| | |||||||| ||| |||||||||| || || ||||| | Sbjct 72705 GGGACCGTCACTTCCCGACAAAATCGTTCCGCCAAATTTTCCACCACAATACCATCGGCA 72646 Query 19375 GCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATTC 19434 | ||||| || || || || | || |||||| ||| ||| ||||| | | | Sbjct 72645 CCAGCAAAGAAGGCCAAGACCATACTGATGAAATGTCGTTCGGATGACGTTAAGGATTGC 72586 Query 19435 CAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCT 19494 ||||| ||| ||| | | | ||| | ||| || | |||||||| |||||| | | Sbjct 72585 CAATCGGTAACATCCTGACTGAGATCAATTTCGTCGGCCGTCCAAAACGAAGCCACGTGT 72526 Query 19495 TTTTTATACATGTTCCATATATCACGATATTGTATAGGAAA 19535 | || ||||||||||| | ||| || ||| || ||||| Sbjct 72525 TGCTTGTACATGTTCCACAAATCGGCATGTTGAATGGGAAA 72485 >seq120 Length=609189 Score = 93.3 bits (102), Expect = 5e-14 Identities = 164/234 (70%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 46971 TCTTTTTCCACAGTAAACTTAATTGGATT-ACTCGCTGATTTTGTTCGTAAATAATACAT 47029 ||||| |||||||| | | ||| | || ||| |||| ||| ||||||| || ||||| Sbjct 566521 TCTTTCTCCACAGTGTATTGAATGGCGTTCACT-GCTGGTTTCGTTCGTAGGTAGTACAT 566463 Query 47030 ACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACT 47089 || ||||| || ||| |||| |||||||||||||| ||||| || | | Sbjct 566462 CCCTGTCTTCAATCCTTTCTTCCACGCATAGAAATGCATAGCAGTTAGCTTGTCAACCGT 566403 Query 47090 AGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGC 47149 ||| || | || || ||| ||||| |||||||| ||||| ||| || | |||||| Sbjct 566402 AGGATCAGCGATGAAAAGATTGAGAGACTGACTCTGGTCAATGAATTTGCCCCGATCAGC 566343 Query 47150 TGCCATATCTAAAATAACCCT-TTGTGGTATCTCCCATACTGTTTTATAAATTT 47202 ||||| || | || || | | | | || ||||| ||||| ||||||| || Sbjct 566342 AGCCATGTCAATGATGTCCTTCATCTTG-ATTTCCCACACTGTCTTATAAAGTT 566290 >seq103 Length=133562 Score = 91.5 bits (100), Expect = 2e-13 Identities = 184/273 (67%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 19239 ATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTA 19298 ||| ||||| | || ||| ||||| |||||| |||| || ||||| || ||||| || Sbjct 27380 ATCAATCAACAGACAGTAGGTTTCTTGATGAATGCTTTCCATGGCCATTTGGAATCCATA 27321 Query 19299 AAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATT 19358 |||||| | ||||| | | | ||||| | |||||| | ||| |||||||||| Sbjct 27320 AAAACAACGCGCTTCCGGAACCGTCACTTCCCGACAAAAGCGTTCCGCCAAATTTTCTAC 27261 Query 19359 AACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATC 19418 || || ||||| | ||||| || || || || | || |||||| ||| Sbjct 27260 CACAATCCCATCGGCGCCGGCAAAGAAGGCCAAGACCATACTGATGAAATGTCGTTCGGA 27201 Query 19419 TGAGGTTAATGTATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCA 19478 | ||| || | | |||||| | | ||||| | | ||| | ||| || | ||||| Sbjct 27200 CGTGGTCAACGACTGCCAATCGGTGACATCTTGACTGAGATCAATTTCGTCGGCCGTCCA 27141 Query 19479 AAAAGAAGCCTCTGCTTTTTTATACATGTTCCA 19511 ||| |||||| | || || ||||||||||| Sbjct 27140 AAAGGAAGCCACGTGTTGCTTGTACATGTTCCA 27108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562106727223800