Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq194 138 1e-27 seq98 113 5e-20 >seq194 Length=282305 Score = 138 bits (152), Expect = 1e-27 Identities = 352/533 (66%), Gaps = 6/533 (1%) Strand=Plus/Plus Query 37168 ACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAA 37227 |||| ||||| |||||||||||||| | |||||| || | ||| ||||||||||| |||| Sbjct 115790 ACAACAAACAGGCAAAATCACAATGCAGACCTTCGTCGCGACTGATCAATTCATTGGAAA 115849 Query 37228 AGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAG 37287 || | || ||||| | ||| | ||| || | ||| || || || || || || | Sbjct 115850 AGCAGAGACCGGGCATAAGACCCCGTTTCTTGAGCCAGAAAATGGCACAGAACGAGCCGG 115909 Query 37288 AAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTAT 37347 |||||||||| ||||| || || |||||||| || |||| | |||| ||| || Sbjct 115910 AAAAGAAAATGCCTTCGACGGCCGCAAATGCGACGCAACGT-TCGGCAAAG--GAAGCAT 115966 Query 37348 AAT---CAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTT 37404 | | | ||||| | ||| | ||||| || ||||| | || | Sbjct 115967 GGTTGGCGTCACACCATTGCAAGGCCCAGTTGGCCTTCTTTTGTACACACGGGACCGTAT 116026 Query 37405 CAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTA 37464 |||| || || | | | |||||| | || || || |||||||| |||| Sbjct 116027 CAATGGCCCGCAACAAATGATCTTTTTCCTTGGGGTCACGAATGTAGGTATCAATGAGTA 116086 Query 37465 AACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAG 37524 | ||| | ||| ||||| ||||| | || || || || ||||||||||| | | Sbjct 116087 ACGAGTACGTCTCACTATGAATGTTTTCGACGGCAATTTGGAATCCATAAAAACAGCGGG 116146 Query 37525 CTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCAT 37584 |||| | | |||||| ||| || |||| | | || || |||||||| || || || | Sbjct 116147 CTTCTGGTGATTGAATTTCGGTACAAAAGTTTTGCGCCAAATTTTCATTCACAATACCGT 116206 Query 37585 CACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATT 37644 | || |||||||| || | ||| | | | ||| |||| ||| | | || || | Sbjct 116207 CCGAGGCGGCAAAGAACGCCAAAACGTGTGACACAAAGTGTCGTTCGTTGCTGGACAAAT 116266 Query 37645 TTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCaaaaa 37697 | |||||||| | | ||| | | ||||||| ||| || | ||||| ||| Sbjct 116267 TCTTCCAATCTTGCAAATCACTGGCCAAATCAATTTCTTCGGCCGTCCAGAAA 116319 >seq98 Length=427084 Score = 113 bits (124), Expect = 5e-20 Identities = 346/532 (65%), Gaps = 6/532 (1%) Strand=Plus/Plus Query 37168 ACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAA 37227 ||| || ||| |||||||||||||| | |||||| || | ||| |||||||| || |||| Sbjct 135029 ACAGTAGACAGGCAAAATCACAATGCAGACCTTCGTCGCGACTAATCAATTCGTTGGAAA 135088 Query 37228 AGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAG 37287 || | || ||||| | ||| | ||| || | |||||| || || ||| || || | Sbjct 135089 AGCAAAGACCGGGCATGAGACCCCGTTTCTTGAGCCAAAAAATGGCACAAAAGGAACCGG 135148 Query 37288 AAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAA---C 37344 |||||||||| ||||| || || ||||| || ||| ||| | | |||| ||| Sbjct 135149 AAAAGAAAATGCCTTCGACGGCCGCAAAGGCGACACAGCGT-TCCGCAAAG--GAAGCGT 135205 Query 37345 TATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTT 37404 | | | | ||||| | ||||| ||||| || ||||| || || | Sbjct 135206 TGTTCGCGTCACACCATTGCAAGGCCCAATGGGCCTTCTTTTGTACACACGGAACCGTAT 135265 Query 37405 CAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTA 37464 |||| || || | | | || |||| ||| || || |||||||| | | Sbjct 135266 CAATGGCCCGCAACAAATGATCCTTCTCTTTCGGATCGCGAATGTACGTATCAATCAAAA 135325 Query 37465 AACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAG 37524 | ||| |||| |||||| ||||| | || || || || || |||||||| | | Sbjct 135326 GAGAATAGGTTTCGCTGTGAATGTTTTCGACGGCAATTTGGAATCCGTAAAAACAACGGG 135385 Query 37525 CTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCAT 37584 |||| | |||||| ||| || |||| | | || || |||||||| || || || | Sbjct 135386 CTTCCGGCGATTGAATTTCGGTACAAAAGTTTTGTGCCAAATTTTCATTCACAATGCCGT 135445 Query 37585 CACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATT 37644 | || |||||||| || | || | | ||| || | ||| | | || || | Sbjct 135446 CGGACGCGGCAAAGAACGCCAACACGTGCGACACAAAGTGACGTTCGTTGCTCGACAAAT 135505 Query 37645 TTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCaaaa 37696 ||||||||| | | ||| | | | ||||| ||| || | |||||||| Sbjct 135506 GTTTCCAATCTTGCAAATCACTGGCGAGATCAATTTCTTCGGCCGTCCAAAA 135557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592314615831800