Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq41 125 6e-24 seq232 123 2e-23 seq120 123 2e-23 seq2 123 2e-23 seq226 116 3e-21 seq82 111 1e-19 seq67 111 1e-19 seq142 105 5e-18 >seq41 Length=265118 Score = 125 bits (138), Expect = 6e-24 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 101252 AAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTG 101311 || || ||||| | ||| | ||| ||| ||||| |||||||||||| | ||| | Sbjct 262735 AATCGCAAAACGAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTCAAAGTGCGT 262794 Query 101312 GCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCT 101371 |||| ||||| ||||| || ||||| || | ||| || || || |||||||| ||||| Sbjct 262795 CCATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGCGGAATACCTTCC 262854 Query 101372 TTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTG 101431 || |||||||| || || ||| | || | ||||| |||| || || || || || Sbjct 262855 TTGTCTTGAATCTTGGTCTTGACATTATCGATCGTGTCCGACGGCTCGACATCGAGCGTA 262914 Query 101432 ACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 | ||||||||||| || ||||| || || ||||| ||| Sbjct 262915 ATAGTTTTGCCGGTCAAGGTTTTGACGAAAATCTGAATG 262953 >seq232 Length=134552 Score = 123 bits (136), Expect = 2e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 101278 TTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAA 101337 ||| ||||| |||||||||||| | ||| | |||| ||||| |||||||| ||||| Sbjct 133078 TTCCTTTTGAATATTGTAATCGCTTAAAGTGCGTCCATCTTCCAACTGCTTACCGGCAAA 133137 Query 101338 TATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAAT 101397 || | ||| || || || || ||||| ||||| || ||||| ||||| || ||| | Sbjct 133138 AATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTTGTCTTGGATTTTGGTCTTGACATT 133197 Query 101398 TTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTAC 101457 || | ||||| |||| || || ||||| || | ||||| ||||| |||||||| || Sbjct 133198 ATCGATCGTGTCCGACGGCTCGACGTCAAGCGTAATAGTTTTTCCGGTCAAAGTTTTGAC 133257 Query 101458 AAATATCTGCATG 101470 || ||||| ||| Sbjct 133258 GAAAATCTGAATG 133270 >seq120 Length=609189 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 101252 AAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTG 101311 || || | ||| ||||| | ||| |||||||| || || |||||||||| | |||| Sbjct 562001 AATCGGAGAACCAAATGCAAGGTCGATTCTTTCTGGATGTTGTAATCGGACAGTGTTCGA 561942 Query 101312 GCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCT 101371 |||| ||||| || || || || || |||| |||||||||||| || ||||| || || Sbjct 561941 CCATCTTCCAACTGTTTTCCGGCGAAAATCAGACGCTGTTGATCCGGAGGAATTCCCTCC 561882 Query 101372 TTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTG 101431 || || || || || || ||| | || | ||||||||||| || || || || ||| Sbjct 561881 TTGTCCTGGATCTTGGTCTTGACATTATCGATAGTGTCAGACGGCTCGACATCGAGCGTG 561822 Query 101432 ACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || || || || || || ||||| || || ||||| Sbjct 561821 ATGGTCTTACCCGTCAAGGTCTTTACGAAGATTTGCAT 561784 >seq2 Length=622807 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 101252 AAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTG 101311 || || | ||| ||||| | ||| |||||||| || || ||||| |||| | |||| Sbjct 352857 AATCGGAGAACCAAATGCAAGGTCGATTCTTTCTGAATGTTGTAGTCGGACAGTGTTCGA 352916 Query 101312 GCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCT 101371 |||| ||||| || || || || || ||||||||||||||||| || ||||| || || Sbjct 352917 CCATCTTCCAACTGTTTTCCGGCGAAAATCAAACGCTGTTGATCCGGAGGAATTCCCTCC 352976 Query 101372 TTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTG 101431 || || || || || || ||| | || | ||||||||||| || || || || ||| Sbjct 352977 TTGTCCTGGATCTTGGTCTTGACATTATCGATAGTGTCAGACGGCTCGACATCGAGCGTG 353036 Query 101432 ACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || || || || || || ||||| || || ||||| Sbjct 353037 ATGGTCTTACCCGTCAAGGTCTTTACGAAGATTTGCAT 353074 >seq226 Length=603765 Score = 116 bits (128), Expect = 3e-21 Identities = 171/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| || | | ||| || || || ||||| ||||| || || || || ||||| ||| Sbjct 85624 TTCCACCGCGGAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGC 85683 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | || | | | || || | ||||| || ||||| ||||||||||||||||| |||| Sbjct 85684 TCAACGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCG 85743 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||| ||||| || || || || || || || | || | |||||||| | || | Sbjct 85744 GAATTCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAA 85803 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAA 101480 | || || |||| || || ||||| ||||| || || || |||||||| | |||| | Sbjct 85804 CATCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCATACCTCCGCGGA 85863 Query 101481 GA 101482 || Sbjct 85864 GA 85865 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | | ||| || || || ||||| ||||| || || || || ||||| ||| Sbjct 85854 CCTCCGCGGAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 85913 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | | || || | ||||| || ||||| ||||||||||||||||| |||||| Sbjct 85914 AACGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGA 85973 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || || || || || || || | || | |||||||| | || || Sbjct 85974 ATTCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACA 86033 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || |||| || || ||||| ||||| || || || |||||||| Sbjct 86034 TCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 86080 >seq82 Length=265081 Score = 111 bits (122), Expect = 1e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 101252 AAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTG 101311 || || || || | ||| | ||| ||| ||||| |||||||||||| | ||| | Sbjct 263015 AATCGCAAGACAAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTCAAAGTGCGT 263074 Query 101312 GCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCT 101371 |||| ||||| ||||| || ||||| || | ||| || || || || ||||| ||||| Sbjct 263075 CCATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGAGGAATACCTTCC 263134 Query 101372 TTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTG 101431 || |||||||| || || ||| | || | ||||| |||| || || || || || Sbjct 263135 TTGTCTTGAATCTTGGTCTTGACATTATCAATCGTGTCCGACGGCTCGACATCGAGCGTA 263194 Query 101432 ACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 | ||||| || || || ||||| ||||| ||||| ||| Sbjct 263195 ATAGTTTTTCCAGTCAAGGTTTTGACAAAAATCTGAATG 263233 >seq67 Length=439500 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101242 TCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGC 101301 ||| |||| | ||| ||||| || || | |||||||||||| || ||||||||||| Sbjct 2842 TCCACCTCGAAGACGCAAAACCAAGTGCAAGGTAGATTCTTTCTGAATATTGTAATCACT 2901 Query 101302 GATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGG 101361 | || | |||| |||||||| ||||| || || ||||| || |||||||| || || Sbjct 2902 CAACGTACGTCCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGG 2961 Query 101362 AATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCAC 101421 ||| || || || ||||| || || || || | || | ||||| |||| || || Sbjct 2962 AATTCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGGCTCAAC 3021 Query 101422 TTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || || | || || || || | || ||||| || || |||||| Sbjct 3022 GTCCAGGGTAATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCATG 3070 >seq142 Length=241092 Score = 105 bits (116), Expect = 5e-18 Identities = 166/237 (70%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 101234 TAGACATTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTG 101293 |||||| || |||| | ||| ||||| || || | ||| ||||||||||| |||||| Sbjct 170311 TAGACA---CCACCTCGGAGACGCAAAACCAAGTGCAAGGTGGATTCTTTTTGAATATTG 170367 Query 101294 TAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGA 101353 ||||| | ||| | |||| |||||||| ||||| || || ||||| || |||||| Sbjct 170368 TAATCACTCAAAGTACGTCCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGA 170427 Query 101354 TCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGAC 101413 || || ||||| || || || ||||| || || || || | || | || || || Sbjct 170428 TCCGGGGGAATTCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTATCCGAA 170487 Query 101414 GTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 | || || || || || | || || || || | || ||||| || || |||||| Sbjct 170488 GGCTCAACGTCCAGGGTAATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCATG 170544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396276975255315