Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq232 125 5e-24 seq82 122 7e-23 seq120 120 2e-22 seq2 116 3e-21 seq142 114 1e-20 seq41 113 3e-20 seq67 105 5e-18 seq226 87.8 1e-12 >seq232 Length=134552 Score = 125 bits (138), Expect = 5e-24 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 48552 CGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCG 48611 |||| || | ||| | ||||| || ||||||||||||||||| || | | || | Sbjct 133055 CGCAGAACAAGATGCAAAGTGCTTTCCTTTTGAATATTGTAATCGCTTAAAGTGCGTCCA 133114 Query 48612 TCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTG 48671 || |||||||||||||||||||| || || || || || |||| |||| || |||||| Sbjct 133115 TCTTCCAACTGCTTACCGGCAAAAATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTTG 133174 Query 48672 TCGCTAATCTTTTGT-TTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAAT 48730 || || ||| || || ||| | | | | || |||| ||| || || | |||||| Sbjct 133175 TCTTGGAT-TTTGGTCTTGACATTATCGATCGTGTCCGACGGCTCGACGTCAAGCGTAAT 133233 Query 48731 CGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||||||| ||||||||||| || |||||||| || Sbjct 133234 AGTTTTTCCGGTCAAAGTTTTGACGAAAATCTGAAT 133269 >seq82 Length=265081 Score = 122 bits (134), Expect = 7e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 48552 CGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCG 48611 ||||| || | ||| | || || || ||||||||||||||||| | | | || | Sbjct 263018 CGCAAGACAAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTCAAAGTGCGTCCA 263077 Query 48612 TCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTG 48671 || ||||||||||| |||||||| || || || || || |||| |||| || |||||| Sbjct 263078 TCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTTG 263137 Query 48672 TCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATC 48731 || |||||| || ||| | | | | || |||| ||| || || | |||||| Sbjct 263138 TCTTGAATCTTGGTCTTGACATTATCAATCGTGTCCGACGGCTCGACATCGAGCGTAATA 263197 Query 48732 GTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||||||| ||||| ||||| ||||||||||| || Sbjct 263198 GTTTTTCCAGTCAAGGTTTTGACAAAAATCTGAAT 263232 >seq120 Length=609189 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||| | || ||||| || || |||||||| || || ||||| | || ||| Sbjct 561992 ACCAAATGCAAGGTCGATTCTTTCTGGATGTTGTAATCGGACAGTGTTCGACCATCTTCC 561933 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 ||||| || ||||| || ||||| ||||||||||||| |||| ||||||||||| Sbjct 561932 AACTGTTTTCCGGCGAAAATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCCTGG 561873 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | | || || |||| ||| || || | ||| || || || Sbjct 561872 ATCTTGGTCTTGACATTATCGATAGTGTCAGACGGCTCGACATCGAGCGTGATGGTCTTA 561813 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||||||| || ||||| || || ||||| Sbjct 561812 CCCGTCAAGGTCTTTACGAAGATTTGCAT 561784 >seq2 Length=622807 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||| | || ||||| ||||| ||||| || || || ||||| | || ||| Sbjct 352866 ACCAAATGCAAGGTCGATTCTTTCTGAATGTTGTAGTCGGACAGTGTTCGACCATCTTCC 352925 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 ||||| || ||||| || |||| ||||||||||||| |||| ||||||||||| Sbjct 352926 AACTGTTTTCCGGCGAAAATCAAACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCCTGG 352985 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | | || || |||| ||| || || | ||| || || || Sbjct 352986 ATCTTGGTCTTGACATTATCGATAGTGTCAGACGGCTCGACATCGAGCGTGATGGTCTTA 353045 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||||||| || ||||| || || ||||| Sbjct 353046 CCCGTCAAGGTCTTTACGAAGATTTGCAT 353074 >seq142 Length=241092 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| ||||| || | ||| ||||||||||||||||||||| | | | || Sbjct 170326 AGACGCAAAACCAAGTGCAAGGTGGATTCTTTTTGAATATTGTAATCACTCAAAGTACGT 170385 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||| || |||||||| || |||| ||| |||||||||| ||||| |||||| Sbjct 170386 CCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGAATTCCCTCC 170445 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | || || | ||| || |||| ||| Sbjct 170446 TTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTATCCGAAGGCTCAACGTCCAGGGTA 170505 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || ||||||| || ||||| ||||| ||||| Sbjct 170506 ATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCAT 170543 >seq41 Length=265118 Score = 113 bits (124), Expect = 3e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 48552 CGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCG 48611 ||||| || | ||| | || || || ||||||||||||||||| | | | || | Sbjct 262738 CGCAAAACGAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTCAAAGTGCGTCCA 262797 Query 48612 TCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTG 48671 || ||||||||||| |||||||| || || || || || |||| |||| || |||||| Sbjct 262798 TCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGCGGAATACCTTCCTTG 262857 Query 48672 TCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATC 48731 || |||||| || ||| | | | | || |||| ||| || || | |||||| Sbjct 262858 TCTTGAATCTTGGTCTTGACATTATCGATCGTGTCCGACGGCTCGACATCGAGCGTAATA 262917 Query 48732 GTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || ||||| ||||| || |||||||| || Sbjct 262918 GTTTTGCCGGTCAAGGTTTTGACGAAAATCTGAAT 262952 >seq67 Length=439500 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| ||||| || | || ||||| ||||||||||||||| | | || Sbjct 2852 AGACGCAAAACCAAGTGCAAGGTAGATTCTTTCTGAATATTGTAATCACTCAACGTACGT 2911 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||| || |||||||| || |||| ||| |||||||||| ||||| |||||| Sbjct 2912 CCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGAATTCCCTCC 2971 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | || |||| ||| || |||| ||| Sbjct 2972 TTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGGCTCAACGTCCAGGGTA 3031 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || ||||||| || ||||| ||||| ||||| Sbjct 3032 ATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCAT 3069 >seq226 Length=603765 Score = 87.8 bits (96), Expect = 1e-12 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGAC-TTCG 48607 || ||||||||||| || || || ||| || || || ||||| || | | || | || Sbjct 85863 AGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTC-GCTCAACGTGCG 85921 Query 48608 ATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTC 48667 |||| || | |||||| |||||||| |||| ||||||||||| | |||| || || Sbjct 85922 GCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGAATTCCTTC 85981 Query 48668 CTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGT 48727 |||||| ||||| || || | | | || || | ||| || || | || Sbjct 85982 CTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACATCGAGGGT 86041 Query 48728 AATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || || ||||| |||||||| || || |||||||||||| Sbjct 86042 GATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCATC 86081 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGAC-TTCG 48607 || ||||||||||| || || || ||| || || || ||||| || | | || | || Sbjct 85635 AGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTC-GCTCAACGTGCG 85693 Query 48608 ATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTC 48667 |||| || | |||||| |||||||| |||| ||||||||||| | |||| || || Sbjct 85694 GCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGAATTCCTTC 85753 Query 48668 CTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGT 48727 |||||| ||||| || || | | | || || | ||| || || | || Sbjct 85754 CTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACATCGAGGGT 85813 Query 48728 AATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| |||||||| || || ||||||||||| Sbjct 85814 GATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 85852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380936230410285