Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq10 123 5e-23 seq168 116 7e-21 seq194 111 3e-19 >seq10 Length=152390 Score = 123 bits (136), Expect = 5e-23 Identities = 534/831 (64%), Gaps = 20/831 (2%) Strand=Plus/Minus Query 213471 ACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTG 213530 |||| || | || || || ||||||| |||||| ||||| || | | | ||| Sbjct 133824 ACAAGCTTCGACAAGGAAATACTGGCCAAGTTGCAGACGGCGGTTTCATCCGGTGCGGTG 133765 Query 213531 TACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTT 213590 ||||| | ||| || ||||||| |||| ||| || |||||||||| ||| | ||||| Sbjct 133764 TACTCGACGATTTCCGTGCACAAGTTGGAGCAACGAATGGTGCCCAAGTTTTTCTGGTTC 133705 Query 213591 GACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGAC 213650 |||||| | ||| | ||||||||||| ||||| || | || || || | || || Sbjct 133704 GACTTTTCATTGCAGGCGTCCTTGTAGAGAATGTAAGGCGTTCCAGTTTCCACTTGCGAG 133645 Query 213651 ACCAGTATCTGGCTCCAGAG-GTACCTG-GCCTTGACCACCCGCCTGAC-AGCTCCGGGC 213707 ||| || | ||| | || ||| ||||| | | ||||| ||| | | | Sbjct 133644 TCCAAAATGGCGAACCACAACGT--CTGTGCCTTTATA----GTCTGACGAGCGC--GTC 133593 Query 213708 GTAGCC--TCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTC 213765 | | || |||| |||||| | | | | ||||||| || || | | |||| Sbjct 133592 CTTCCTGTTCATACTTTTCGTACAACGCCTCGAATTCGGCTCCGTAGCAATCGGCAAGTC 133533 Query 213766 CCGGA-CAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATG 213824 | || | || ||| || | | ||||| || || |||||| || |||| Sbjct 133532 CGGGCGCCTCATTGGGG-CAGAACAAACTCCAAGTGGAGTTTTCCTTGACTCGCTTCATG 133474 Query 213825 AACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCA 213884 |||| || || ||||| |||||| || || || | | | || | | || | | Sbjct 133473 AACAAATCGGGCACCCAAAGCGCGTAAAATAGATCACGCGCACGA-TCGCTTTCATTGCC 133415 Query 213885 GAG-TTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGAT 213943 | | |||||||||| ||| || || ||||||| || || ||||||||||||| ||| Sbjct 133414 GTGATTTTTGCGCAAATCCAGGAACTCAAAGACATCGGCATGCCACGGCTCCAAATAGCA 133355 Query 213944 GGCAAAGGCGCCCGGCCTCTTGCCGCC---CTGGTCCACCAGCCTGGCCACCATGTTGAA 214000 ||||| ||| | |||||| || ||| ||||| | ||| ||||||| Sbjct 133354 GGCAATACTGCCTTTGCGCTTGCCACCACCCTGATCCACGTAACGCGCCGTGTTGTTGAA 133295 Query 214001 GATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCC 214060 | ||| || | ||| || | ||||| ||| |||||||||||| || || || Sbjct 133294 AACGCGAAGCATGGGCACAATACCGTTCGACGTTCCGTTGGTTCCGCGAATGTAGGATTT 133235 Query 214061 GGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGC 214120 | ||| | | |||| |||| ||| || || || || || ||||||||||| ||||| Sbjct 133234 GCTGGCTCGAATGTTGTGAATGGCGAGACCGATACCTCCAGCATACTTGGAGATGATGGC 133175 Query 214121 GCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAA 214180 |||| | | | || || ||| || | || ||| | | | | | |||||||| Sbjct 133174 GCAGTTCTTAAGCGTATCGTAGATACCTTCAATAGAGTCCTGCTTCATGGTGAGCAAGAA 133115 Query 214181 GCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGAT 214240 ||| ||| | || ||| || | || | ||||| |||||||| | || || | Sbjct 133114 GCACGACGACATTTGCGGCATGTTGGTTCCGGCATTGAAGAGCGTGGGCGTAGCGTGCGT 133055 Query 214241 CATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTC 214291 | || || || ||| |||||||||| | |||| ||||||||| Sbjct 133054 AAAGTACCGATTCGAAAGGTCGTTGTAGGTCTCAATGACTTTGGGGATGTC 133004 >seq168 Length=39825 Score = 116 bits (128), Expect = 7e-21 Identities = 532/830 (64%), Gaps = 18/830 (2%) Strand=Plus/Minus Query 213471 ACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTG 213530 |||| || | || || || ||||||| |||||| ||||| || | | | ||| Sbjct 29437 ACAAGCTTCGACAAGGAAATACTGGCCAAGTTGCAGACGGCGGTTTCATCCGGTGCGGTG 29378 Query 213531 TACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTT 213590 ||||| | || || ||||||| |||| || || ||||| |||| ||||| ||||| Sbjct 29377 TACTCGACAATTTCCGTGCACAAGTTGGAACAACGAATGGTACCCAAGTTCTTCTGGTTC 29318 Query 213591 GACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGAC 213650 |||||| | ||| || |||||||||||| ||||| || | || || || | || || Sbjct 29317 GACTTTTCATTGCAAGCATCCTTGTAGAGAATGTAAGGCGTTCCAGTTTCCACTTGCGAG 29258 Query 213651 ACCAGTATCTGGCTCCAGAG-GTACCTG-GCCTTGACCACCCGCCTGAC-AGCTCCGGGC 213707 ||| || | ||| | || ||| ||||||| | ||||| ||| | | | Sbjct 29257 TCCAAAATGGCGAACCACAAAGT--CTGTGCCTTGATG----GTCTGACGAGCGC-GTCC 29205 Query 213708 GTAGCCT-CGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCC 213766 | | | |||| |||||| | | | |||||| || || | | ||||| Sbjct 29204 TTCTTGTTCATACTTTTCGTACAATGCCTCGAATTCAGCTCCGTAGCAATCGGCAAGTCC 29145 Query 213767 CGGA-CAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGA 213825 || | || ||| || | | ||||| || || |||||| || ||||| Sbjct 29144 AGGTGCCTCATTGGGG-CAGAACAAACTCCAAGTGGAGTTTTCCTTGACTCGCTTCATGA 29086 Query 213826 ACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAG 213885 ||| || || ||||| |||||| || || || | | | || | | || | | | Sbjct 29085 ACAAATCGGGCACCCAAAGCGCGTAAAAGAGATCACGCGCACGA-TCGCTTTCATTTCCG 29027 Query 213886 AGTTT-TTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATG 213944 | || ||||||| ||| || || ||||||| || || ||||||||||||| ||| | Sbjct 29026 TGATTCTTGCGCAAATCAAGGAATTCAAAGACATCGGCATGCCACGGCTCCAAATAGCAG 28967 Query 213945 GCAAAGGCGCCCGGCCTCTTGCCGCC---CTGGTCCACCAGCCTGGCCACCATGTTGAAG 214001 |||| ||| | |||||| || ||| ||||| | ||| |||||||| Sbjct 28966 GCAATACTGCCTTTACGCTTGCCACCACCCTGATCCACATAACGCGCCGTGTTGTTGAAG 28907 Query 214002 ATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCG 214061 | ||| || | ||| || | ||||| || ||||||||| ||| || || || | Sbjct 28906 ACGCGAAGCATGGGCACAATACCGTTCGATGTTCCGTTGGTACCCCGAATGTAGGATTTG 28847 Query 214062 GAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCG 214121 ||| | | |||| |||| ||| || || || ||||||||||||||||| |||||| Sbjct 28846 CTGGCTCGAATGTTGTGAATGGCGAGACCGATACCTCCGGCGTACTTGGAGATGATGGCG 28787 Query 214122 CAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAG 214181 ||| | | | || || || || | || || | | | | | ||||||||| Sbjct 28786 CAGTTCTTGAGCGTATCGTAAATACCTTCAATTGAATCCTGCTTCATGGTGAGCAAGAAG 28727 Query 214182 CAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATC 214241 || || | |||||| || | || | |||||| |||||||| | || || | Sbjct 28726 CACGATGACATTTGGGGCATGTTGGTTCCGGCGTTGAAGAGCGTGGGCGTAGCGTGCGTA 28667 Query 214242 ATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTC 214291 | || || || ||| |||||||||| | |||| ||||||||| Sbjct 28666 AAGTACCGATTCGAAAGGTCGTTGTAGGTCTCAATGACTTTGGGGATGTC 28617 >seq194 Length=282305 Score = 111 bits (122), Expect = 3e-19 Identities = 182/260 (70%), Gaps = 2/260 (1%) Strand=Plus/Plus Query 48114 GCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCA 48173 |||||| || | || |||||||| || | |||| |||||||| || ||||| | Sbjct 115781 GCTTGGTGTACAACAAACAGGCAAAATCACAATGCAGACCTTCGTCGCGACTGATCAATT 115840 Query 48174 CGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGA 48233 | ||||| ||||||||||| ||||| | |||| | |||||||||||||| || || Sbjct 115841 CATTGGAAAAGCAGAGACCGGGCATAAGACCCCGTTTCTTGAGCCAGAAAATGGCACAGA 115900 Query 48234 AAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAG 48293 | ||||| || ||||| ||||| || || ||||| || ||| | | || | || | Sbjct 115901 ACGAGCCGGAAAAGAAAATGCCTTCGACGGCCGCAAATGCGACGCAACGTTCGGCAAAGG 115960 Query 48294 AAGCGTTCTTGTC-TGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGC 48352 |||| | ||| | | | | | | ||| ||||||| |||||||| | | || || Sbjct 115961 AAGCATGGTTGGCGTCACACCATTGCAAG-GCCCAGTTGGCCTTCTTTTGTACACACGGG 116019 Query 48353 ATCGTCTCTATGGCCCGGAA 48372 | ||| || |||||||| || Sbjct 116020 ACCGTATCAATGGCCCGCAA 116039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931529364972800