Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq142 113 4e-20 seq67 104 2e-17 >seq142 Length=241092 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || ||||| ||| | |||||||| ||||||||| || || ||||| Sbjct 170543 ATGCAAATTTTCGTAAAGACACTGACGGGTAAGACCATTACCCTGGACGTTGAGCCTTCG 170484 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || ||| | | | | ||||| || ||| ||||| |||||| | ||| |||||| Sbjct 170483 GATACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGAATTCCCCCGGATCAA 170424 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || || | || || || || ||||||||||||||| ||| || ||||| || Sbjct 170423 CAACGATTGATTTTCGCCGGTAAACAATTGGAAGATGGACGTACTTTGAGTGATTACAAT 170364 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 |||||||||||||| || ||||| |||| || Sbjct 170363 ATTCAAAAAGAATCCACCTTGCACTTGGTTTT 170332 >seq67 Length=439500 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || ||||| ||| | |||||||| ||||||||| || || || || Sbjct 3069 ATGCAAATTTTCGTAAAGACACTGACGGGTAAGACCATTACCCTGGACGTTGAGCCGTCG 3010 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || ||| | | | | ||||| || ||| ||||| |||||| | ||| |||||| Sbjct 3009 GACACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGAATTCCCCCGGATCAA 2950 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || || | || || || || ||||||||||||||| || || ||||| || Sbjct 2949 CAACGATTGATTTTCGCCGGTAAACAATTGGAAGATGGACGTACGTTGAGTGATTACAAT 2890 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 ||||| ||||||||||| ||||| |||| || Sbjct 2889 ATTCAGAAAGAATCTACCTTGCACTTGGTTTT 2858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425403270536805