Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq229 178 8e-39 seq38 167 2e-35 seq232 114 8e-20 seq82 105 4e-17 seq41 100 2e-15 seq226 98.7 6e-15 seq142 98.7 6e-15 seq158 91.5 1e-12 seq75 91.5 1e-12 seq67 91.5 1e-12 seq120 87.8 1e-11 >seq229 Length=259268 Score = 178 bits (196), Expect = 8e-39 Identities = 399/594 (67%), Gaps = 13/594 (2%) Strand=Plus/Plus Query 474335 GGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAGAA 474394 ||||| ||| | ||||| |||||||||||||| | ||| ||||| || | | || || Sbjct 114810 GGTATCGATCTTGGAACAACTTACAGTTGTGTTGGTGTCTGGCAGAACGATCGTGTCGAG 114869 Query 474395 ATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAACT 474454 || |||||||| |||||||||||| | || || || || ||||| | || || ||||| Sbjct 114870 ATCATTGCCAACGACCAAGGTAATCGTACTACCCCTTCGTATGTGGCGTTCACCGAAACC 114929 Query 474455 GAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTATT 474514 |||| |||||| |||||||| || || | || ||||| || | || || || Sbjct 114930 GAACGTCTTATCGGAGATGCCGCCAAGTCCCAGGCTGCTATGAACGCCCACAACACCATC 114989 Query 474515 TTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATG 474574 || ||||| || | | || || ||||| || ||| | ||| ||||| || ||| Sbjct 114990 TTCGATGCCAAGCGTCTTATCGGACGTAAGTTCACCGATCCTGGTGTTCAATCCGACATG 115049 Query 474575 CGTCATTGGCCTTTTAAGGTGATAAATG---TTGGTGGTAAACCATATATAGAAG--CAA 474629 || |||||||| || | | ||||||| || || |||| || Sbjct 115050 AAGCACTGGCCTTTCTCTGTCGTCTCCGGACCCGGTGGTACCCCCATCATTGAAGTCGAA 115109 Query 474630 TACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCA 474689 |||| | || || | ||||| || | || |||||||||| |||||||| ||| Sbjct 115110 TACAAG--GGAGAGAAGAAACAGTTCAAGGCTGAGGAAATTTCTTCCATGGTTTTGACCA 115167 Query 474690 AAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTG 474749 | ||||| ||| ||| | || || ||| | ||||| | | || || ||||| | Sbjct 115168 AGATGAAGGAAATCGCTGAAGCCTACCTCGGAAAGGAAGTCAAGAACGCTGTCATTACCG 115227 Query 474750 TTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAG 474809 | || || || || || || || || |||||||| || || ||||| || ||||| | Sbjct 115228 TCCCGGCTTACTTCAACGACTCGCAGCGTCAAGCTACCAAGGATGCTGGTTCGATTGCCG 115287 Query 474810 GTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTG 474869 | | || || | |||||||| || || || || || || || |||| || ||||||| Sbjct 115288 GCTTGAACGTCCTTCGTATTATCAACGAGCCTACTGCCGCTGCTATTGCCTACGGTCTTG 115347 Query 474870 ATAAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGATT---GTGGAGGTA 474920 | |||| ||| ||||| || || | ||||| |||| ||||||||| Sbjct 115348 ACCAGAAGGGTGA-TGAGAAG--AACGTCCTTATCTTCGATTTGGGTGGAGGTA 115398 >seq38 Length=286591 Score = 167 bits (184), Expect = 2e-35 Identities = 400/596 (67%), Gaps = 17/596 (3%) Strand=Plus/Plus Query 474335 GGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAGAA 474394 || || ||| | || || |||||||||||||| | |||||||| || | | || || Sbjct 256692 GGAATCGATCTTGGTACAACTTACAGTTGTGTTGGAGTTTGGCAGAACGATCGTGTCGAG 256751 Query 474395 ATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAACT 474454 || |||||||| ||||| || ||| | || || || || ||||| |||| || ||||| Sbjct 256752 ATCATTGCCAACGACCAGGGCAATCGTACGACCCCTTCGTATGTGGCTTTCACCGAAACC 256811 Query 474455 GAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTATT 474514 |||| |||||| || ||||| || || | ||| ||||| || | || || || Sbjct 256812 GAACGTCTTATCGGTGATGCCGCCAAGTCTCAGGCTGCTATGAACGCCCACAACACCATC 256871 Query 474515 TTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATG 474574 || ||||| || | | || || ||||| || ||| | ||| ||||| || ||| Sbjct 256872 TTCGATGCCAAGCGTCTTATCGGACGTAAGTTCACCGATCCTGGTGTTCAATCCGACATG 256931 Query 474575 CGTCATTGGCCTTTTAAGGTGATAAATG---TTGGTGGTA-AACCAT-ATATAGAAGCAA 474629 || |||||||| | || | | || |||| |||| || || || Sbjct 256932 AAACACTGGCCTTTCACCGTCGTCTCCGGACCCGGCGGTACCCCCATCATTGAGGTCGAA 256991 Query 474630 TACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCA 474689 |||| | || || | ||||| || | || |||| ||||| |||||||| ||| Sbjct 256992 TACAAG--GGAGAGAAGAAACAGTTCAAGGCTGAGGAAATCTCTTCCATGGTTTTGACCA 257049 Query 474690 AAATGAAACAAACCGC--GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTAC 474747 | ||||| ||| ||| |||| ||||| ||| | ||||| | | || || ||||| Sbjct 257050 AGATGAAGGAAATCGCTGAAGCT--TATCTCGGAAAGGAAGTCAAGAACGCCGTCATTAC 257107 Query 474748 TGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGC 474807 || || || || || || || || || |||||||| || || ||||| || ||||| Sbjct 257108 CGTCCCGGCTTACTTCAACGACTCGCAGCGTCAAGCGACCAAGGATGCTGGTTCGATTGC 257167 Query 474808 AGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCT 474867 || | || ||| | ||||| || || || || || || || || |||| || ||||| Sbjct 257168 CGGCTTGAACGTTCTTCGTATCATCAACGAGCCTACTGCCGCTGCTATTGCCTACGGTCT 257227 Query 474868 TGATAAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGATT---GTGGAGGTA 474920 ||| |||| |||| ||||| || || | ||||| |||| ||||||||| Sbjct 257228 TGACCAGAAGGGTGAC-GAGAAG--AACGTCCTCATCTTCGATTTGGGTGGAGGTA 257280 >seq232 Length=134552 Score = 114 bits (126), Expect = 8e-20 Identities = 157/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 480558 CGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTA 480617 || || |||||||| | || ||||| || || ||| ||||| || ||| | | Sbjct 133055 CGCAGAACAAGATGCAAAGTGCTTTCCTTTTGAATATTGTAATCGCTTAAAGTGCGTCCA 133114 Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 ||||| | ||||| || |||||||| |||||||| || || |||||||| ||||||||| Sbjct 133115 TCTTCCAACTGCTTACCGGCAAAAATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTTG 133174 Query 480678 TCTTGAATCTTTTGT-TTGACAGCTTCAATAGTATC--AGTGTGTGAAGTTTCAAGGGTA 480734 ||||| || ||| || |||||| || || || || | | || | ||||| ||| Sbjct 133175 TCTTGGAT-TTTGGTCTTGACATTATCGATCGTGTCCGACGGCTCGACG--TCAAGCGTA 133231 Query 480735 ATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||||| ||||| | ||| || |||||||| || Sbjct 133232 ATAGTTTTTCCGGTCAAAGTTTTGACGAAAATCTG 133266 >seq82 Length=265081 Score = 105 bits (116), Expect = 4e-17 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 480564 ACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCT-AGAGTTCTGTTATCTTC 480622 |||||||| | |||||||| || || ||| ||||| ||| | ||| | ||| || Sbjct 263024 ACAAGATGCAAAGTACTTTCCTTTTGAATATTGTAATC-GCTCAAAGTGCGTCCATCCTC 263082 Query 480623 AAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTG 480682 | |||||||| |||||||| |||||||| || || |||||||| |||||||||||||| Sbjct 263083 CAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGAGGAATACCTTCCTTGTCTTG 263142 Query 480683 AATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTT 480742 |||||| |||||| ||||| || || | | || || ||||||||||| Sbjct 263143 AATCTTGGTCTTGACATTATCAATCGTGTCCGACGGCTCGACATCGAGCGTAATAGTTTT 263202 Query 480743 ACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || | || || || ||||| || Sbjct 263203 TCCAGTCAAGGTTTTGACAAAAATCTG 263229 >seq41 Length=265118 Score = 100 bits (110), Expect = 2e-15 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 480564 ACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCT-AGAGTTCTGTTATCTTC 480622 || ||||| | |||||||| || || ||| ||||| ||| | ||| | ||| || Sbjct 262744 ACGAGATGCAAAGTACTTTCCTTTTGAATATTGTAATC-GCTCAAAGTGCGTCCATCCTC 262802 Query 480623 AAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTG 480682 | |||||||| |||||||| |||||||| || || || ||||| |||||||||||||| Sbjct 262803 CAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGCGGAATACCTTCCTTGTCTTG 262862 Query 480683 AATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTT 480742 |||||| |||||| || || || || | | || || ||||||||||| Sbjct 262863 AATCTTGGTCTTGACATTATCGATCGTGTCCGACGGCTCGACATCGAGCGTAATAGTTTT 262922 Query 480743 ACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| | || || |||||||| || Sbjct 262923 GCCGGTCAAGGTTTTGACGAAAATCTG 262949 >seq226 Length=603765 Score = 98.7 bits (108), Expect = 6e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 || || || |||||||| ||||| || | ||| ||||||||||| ||||||||||||||| Sbjct 85698 TCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGAATTCCTTCCTTG 85757 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATA 480737 || || ||||| ||||| || || || |||| | | | || ||||| || Sbjct 85758 TCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACATCGAGGGTGATG 85817 Query 480738 GTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || ||||| | |||||| |||||||| || Sbjct 85818 GTCTTTCCGGTCAAAGTCTTGACGAAAATCTG 85849 Score = 98.7 bits (108), Expect = 6e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 || || || |||||||| ||||| || | ||| ||||||||||| ||||||||||||||| Sbjct 85926 TCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGAATTCCTTCCTTG 85985 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATA 480737 || || ||||| ||||| || || || |||| | | | || ||||| || Sbjct 85986 TCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACATCGAGGGTGATG 86045 Query 480738 GTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || ||||| | |||||| |||||||| || Sbjct 86046 GTCTTTCCGGTCAAAGTCTTGACGAAAATCTG 86077 >seq142 Length=241092 Score = 98.7 bits (108), Expect = 6e-15 Identities = 135/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 480581 TTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAA 480640 |||||| || ||| |||||| | ||| | |||||| | ||| || || || || Sbjct 170352 TTCTTTTTGAATATTGTAATCACTCAAAGTACGTCCATCTTCCAATTGTTTACCGGCGAA 170411 Query 480641 AATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGC 480700 ||| | ||||||||||| || |||||||| ||||||||||| ||||| ||||| Sbjct 170412 AATCAATCGTTGTTGATCCGGGGGAATTCCCTCCTTGTCTTGGATCTTGGTCTTGACGTT 170471 Query 480701 TTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAAC 480760 || || ||||| | | | || |||||||| || ||||| || || ||||| || Sbjct 170472 GTCGATCGTATCCGAAGGCTCAACGTCCAGGGTAATGGTCTTACCCGTCAGTGTCTTTAC 170531 Query 480761 GAAAATTTG 480769 ||||||||| Sbjct 170532 GAAAATTTG 170540 >seq158 Length=111935 Score = 91.5 bits (100), Expect = 1e-12 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 817100 GATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAATA 817159 |||| ||| || || |||||||| || ||||||||| | ||||| ||| | || || || Sbjct 74947 GATTATTCGTCACCGAATATTGCCAAAGAAATGCATGTGGGACATTTGCGTTCCACGATT 75006 Query 817160 ATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGAATAAAT 817219 |||||||| | | ||| | ||| |||||| ||| ||| || || | ||| Sbjct 75007 ATTGGTGATACATTGTGTCGTGTATTGGAATTTGTGGGACATGATGTCGTGCGACTCAAT 75066 Query 817220 CATATTGGTGATTGGGGAACACAATTTGGTATGTT 817254 ||| ||||||||||||| || || ||||| ||||| Sbjct 75067 CATGTTGGTGATTGGGGGACCCAGTTTGGCATGTT 75101 >seq75 Length=553717 Score = 91.5 bits (100), Expect = 1e-12 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 817100 GATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAATA 817159 |||||||| || || |||||||| || ||||||||| | ||||| ||| | || || || Sbjct 97528 GATTTTTCGTCACCCAATATTGCCAAAGAAATGCATGTGGGACATTTGCGTTCCACGATT 97587 Query 817160 ATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGAATAAAT 817219 |||||||| | | || | ||| |||||| ||| ||| || || | ||| Sbjct 97588 ATTGGTGATACATTGTGCCGTGTATTGGAATTTGTGGGACATGATGTGGTCCGACTCAAT 97647 Query 817220 CATATTGGTGATTGGGGAACACAATTTGGTATGTT 817254 ||| | ||||||||||| ||||| ||||| ||||| Sbjct 97648 CATGTGGGTGATTGGGGGACACAGTTTGGCATGTT 97682 >seq67 Length=439500 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| | ||| || || || ||||| | ||||||||||| || |||||||| ||||| Sbjct 2914 ATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGAATTCCCTCCTT 2973 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 |||||| ||||| ||||| || || || || | | | || |||||||| Sbjct 2974 GTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGGCTCAACGTCCAGGGTAAT 3033 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||| || || ||||| ||||||||||| Sbjct 3034 GGTCTTACCCGTCAGTGTCTTTACGAAAATTTG 3066 >seq120 Length=609189 Score = 87.8 bits (96), Expect = 1e-11 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||| | || |||| |||||| | || ||||| || ||||| ||||| ||| Sbjct 561962 TTGTAATCGGACAGTGTTCGACCATCTTCCAACTGTTTTCCGGCGAAAATCAGACGCTGT 561903 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 ||||| ||||||||||| |||||||| || ||||| |||||| || ||||| ||| Sbjct 561902 TGATCCGGAGGAATTCCCTCCTTGTCCTGGATCTTGGTCTTGACATTATCGATAGTGTCA 561843 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | || || || || || ||||| || | ||||| ||||| ||||| Sbjct 561842 GACGGCTCGACATCGAGCGTGATGGTCTTACCCGTCAAGGTCTTTACGAAGATTTG 561787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268166546018660