Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq120 125 4e-24 seq2 105 3e-18 seq168 82.4 4e-11 >seq120 Length=609189 Score = 125 bits (138), Expect = 4e-24 Identities = 282/424 (67%), Gaps = 0/424 (0%) Strand=Plus/Minus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| | ||| |||||||| | ||||| || || |||| || | |||||||| Sbjct 565166 CATAAACAGATCCGGAATCCAAAGCGCATAGAACAAGTCTCGTGCCCGATGCTCTTCTTT 565107 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 ||||||||| || || |||| ||| | |||||| ||||| || ||||| ||||| | || Sbjct 565106 TCCGTGATTTTTCTTGAGATTTAATACATCAAATATATCAGAATGCCACGGTTCCAGGTA 565047 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 || ||||||| || | || ||||| || || || ||||| | || | | Sbjct 565046 GACAGCAAAAGCTCCCGGCCGCTTGCCTCCTCCCTGGTCAACGTAACGACTTGTGGCGTC 564987 Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172 | ||||| | ||| || || || ||| | |||| |||| ||| | | ||||| | Sbjct 564986 GTAAACTCGAAGCATGGGCACCAAGCCATTCGAAACTCCGCGTGTACCACGAATCGGTGT 564927 Query 26173 TCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGC 26232 |||| | || |||| |||| || | || ||||| || || |||| ||||| | Sbjct 564926 TCCTCGGGCTCGGATATTGTGAACAGATAAGCCAATTCCTCCTGCTGATTTCGAAATTAC 564867 Query 26233 TGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAA 26292 ||||| | | || || | || || || ||| | ||||| || | Sbjct 564866 CGCACATCTTTTGAGGGTGTCATAGATCCCAGAAATCGAATCGTCACTCATTTGTACAAG 564807 Query 26293 AAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATG 26352 ||| || || || | ||| | ||||||||| ||||| | ||| | ||||||| |||||| Sbjct 564806 AAAGCACGACGAGAGTTGAGGATGAGTTGTACCTGAGTGAAAGAGCGTCGGTGAAGCATG 564747 Query 26353 AGTA 26356 ||| Sbjct 564746 CGTA 564743 >seq2 Length=622807 Score = 105 bits (116), Expect = 3e-18 Identities = 301/460 (65%), Gaps = 2/460 (0%) Strand=Plus/Plus Query 25914 CATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTC 25973 ||| || |||||| | |||||| | ||| |||||||| | ||||| || || |||| Sbjct 349619 CATCTTCCTCAACACGTTTCATAAACAGATCGGGAATCCAAAGCGCATAGAACAAGTCTC 349678 Query 25974 TCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTG 26033 || | ||||||||||||||||| || || |||| || | |||||| ||||| | Sbjct 349679 GTGCCCGATGCTCTTCTTTTCCGTGATTTTTCTTGAGATTCAACACATCAAAGATATCAG 349738 Query 26034 AGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTA 26093 | ||||||||||| | |||| ||||||| || | || || || || || || | Sbjct 349739 AATGCCATGGTTCCAGGTAGACAGCAAAAGCTCCCGGCCGCTTGCCCCCGCCCTGGTCAA 349798 Query 26094 CGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGT 26153 |||| | || ||| | ||||| | |||||| || || ||| | |||| |||| Sbjct 349799 CGTAACGACTCGTAGCATCGTAAACTCGGAGCATTGGCACCAAGCCATTCGAAACTCCGC 349858 Query 26154 TTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCAC 26213 || | | |||| || ||| | | |||| |||| | | || || || | Sbjct 349859 GCGTACCACGAATTGGGGTTCCCCGGGCCCGGATATTGTGAACGGACAGGCCAATACCTC 349918 Query 26214 CAGCCCATTTTGAAATAGCTGCACA-ATCTGAAACTGTATCGAAAATTCCTTTTATGCTA 26272 | || |||| || || | ||||| ||| | || ||| | || || || | Sbjct 349919 CGGCTGATTTGGAGATTACCGCACACCTCT-TGAGGGTGTCGTATATCCCCGAAATCGAA 349977 Query 26273 TCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTA 26332 || | ||||| || | || || || || | ||| | ||| ||||| ||||| | | Sbjct 349978 TCGTCACTCATTTGTACAAGGAAGCACGAGGAGAGTTGAGGATGCGTTGTACCTGAGTGA 350037 Query 26333 AATAATGTCGGTGTAGCATGAGTATAATATCCTTCACTCA 26372 || | ||||||| |||||| ||| | ||||| ||||| Sbjct 350038 AAGAGCGTCGGTGAAGCATGCGTAAAGAATCCTCGACTCA 350077 >seq168 Length=39825 Score = 82.4 bits (90), Expect = 4e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 ||| || ||||| ||| |||| | |||| || ||| || ||| || ||||| || Sbjct 29135 ATTGGGGCAGAACAAACTCCAAGTGGAGTTTTCCTTGACTCGCTTCATGAACAAATCGGG 29076 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTT-CTTTTCCGTGATTCTTTT 26006 | ||| | || ||||| | ||| | ||| | || ||| | |||||||||||||| Sbjct 29075 CACCCAAAGCGCGTAAAAGAGATCACGCGCACG-ATCGCTTTCATTTCCGTGATTCTTGC 29017 Query 26007 TTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTAC 26066 | ||| | ||| ||||| | ||| | ||||| || || |||||| |||| ||| | Sbjct 29016 GCAAATCAAGGAATTCAAAGACATCGGCATGCCACGGCTCCAAATAGCAGGCAATACTGC 28957 Query 26067 CTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAAC 26118 |||| | || || ||||| ||||| || || | || || | ||||| || Sbjct 28956 CTTTACGCTTGCCACCACCCTGATCCACATAACGCGCCGTGTTGTTGAAGAC 28905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039090242125