Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq43 89.7 6e-13 seq235 87.8 2e-12 >seq43 Length=376587 Score = 89.7 bits (98), Expect = 6e-13 Identities = 125/172 (73%), Gaps = 4/172 (2%) Strand=Plus/Plus Query 138468 TCTATGTTGCCATCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCA 138527 || ||||| |||| |||||| || || | ||||| ||||| ||||||||||| ||| Sbjct 345035 TCGATGTTTCCATTGTCATCATTCTCAACGACGACAACCTTCATACCTGCCATGACAGCA 345094 Query 138528 CTAGCAGGATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATCT 138587 || |||||||| ||||| || || |||| || || ||||| || ||||| | | | || Sbjct 345095 CTTGCAGGATTGGTTCCGTGAGCCGACTTGGGAATGAGACACACGTTTCTGTGACCTTCG 345154 Query 138588 CCTGAT--CCTTGATGATATGCTTGGATTGCTAACAGTCCTGCATACTCACC 138637 || ||| || | | || || ||| || ||||| || ||||| ||||| Sbjct 345155 CC-GATGGACTCCAAG-TACGCAGTGATGGCCAACAGACCGGCATATTCACC 345204 >seq235 Length=297710 Score = 87.8 bits (96), Expect = 2e-12 Identities = 233/349 (67%), Gaps = 14/349 (4%) Strand=Plus/Minus Query 138236 CTTATGTAAATTTAGATGACATACATCTGCACC-AT-AGTCACATGGTTTTGCTAGACCT 138293 ||| |||||||| ||||| |||||||| ||||| || || | || || | | | ||| Sbjct 66917 CTTGTGTAAATTGAGATGGCATACATCCGCACCGATGAGGC-CA-GGACTGGTCAAACCG 66860 Query 138294 ACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATC 138353 || || ||||| | ||| || || || | ||||| || ||||| |||||| Sbjct 66859 ACTTGGGCATTCATATTCGCTCCGTCCATGTATACTTGTCCACCGGCAGCATGAATTGCT 66800 Query 138354 TTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATA 138413 | ||| | | | |||| | || || |||||| ||||| ||||| || | ||| Sbjct 66799 TCACAAACATCTACGATGCGTTCCTCGAAAACACCAAATGTCGAAGGATACGTTACCATG 66740 Query 138414 ATACATGAGAGTTCAAATG-TATTCATGATTGCTTTCTT----CTCTAGATCTTTGATGT 138468 | | | | |||||| | | || ||| | || | || || | || | Sbjct 66739 AAA-----GCGGCCAAATGATCCTTGTGTTTGTTAATTTTGGCCGTAAGGTCATCGAAAT 66685 Query 138469 CTATGTTGCCATCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCAC 138528 | ||||| |||| |||||| | || | ||||| ||||| ||||||||||| |||| Sbjct 66684 CGATGTTTCCATTGTCATCATTTTCAACGACCACAACCTTCATACCTGCCATGACAGCAC 66625 Query 138529 TAGCAGGATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCT 138577 | |||||||| ||||| || || |||| ||| || ||||| || ||||| Sbjct 66624 TTGCAGGATTGGTTCCGTGAGCCGACTTTGGAATGAGACACACGTTTCT 66576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578996264943400