Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq167 134 2e-26 seq10 125 1e-23 >seq167 Length=323482 Score = 134 bits (148), Expect = 2e-26 Identities = 245/359 (68%), Gaps = 0/359 (0%) Strand=Plus/Plus Query 47806 TCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGT 47865 ||||| | | |||||| || | |||| ||||||| | ||||| ||||| | |||||| Sbjct 235825 TCATCGGATGTTTCTTGCTGCAACATTCTCCACATACCTTCGACGTAATCACGTGCATGT 235884 Query 47866 CCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAG 47925 ||||||||||| ||||| | || || || ||| | ||||| || | Sbjct 235885 CCCCAGTCACGCTTGGCATCCAAGTTACCGAGGAATAGTGTTTTCTGCTTTCCGTGGTGA 235944 Query 47926 ATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGAT 47985 || || || | | || ||||| | || || |||||| ||||| | ||| || Sbjct 235945 ATCGCAGCTACACCGCAAGTGATCTTTCTCGTAACGAAAGTTCTTCCACGACGTGGCGAC 236004 Query 47986 TCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTT 48045 || ||||| || || || || | | || ||| ||||| | |||||||||||| Sbjct 236005 TCGTGATTGAAGAGGATTCCGTTGGTGAGATGCATACCGTAGGCTTCACGATAGTTGACG 236064 Query 48046 ACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTG 48105 | |||||| || |||| | || ||||| |||| || ||||| |||||||| || || Sbjct 236065 AGAATCCAGAACGCATACTGCTTGGCAACCGCATAGGGCGAACGAGGATAGAAGGGAGTC 236124 Query 48106 GTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATA 48164 ||||| | || || || || ||||| || || ||||| ||||| ||||||||||| Sbjct 236125 GTCTCGGATTGCGGCACTTCCTGAACCTTTCCGTAGAGTTCGCTGGTCGATGCTTGATA 236183 >seq10 Length=152390 Score = 125 bits (138), Expect = 1e-23 Identities = 247/365 (68%), Gaps = 8/365 (2%) Strand=Plus/Minus Query 47806 TCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGT 47865 ||||| | | |||||| || | |||| |||||| |||| || ||||| | |||||| Sbjct 97804 TCATCGGATGTTTCTTGCTGCAACATTCTCCACATGCCCTCAACGTAATCACGTGCATGT 97745 Query 47866 CCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAG 47925 ||||||||||| ||||| | ||| || || |||||| || | | ||| | | Sbjct 97744 CCCCAGTCACGCTTGGCATCCAAATTACCGAGG----AACAGTGTTTTCTGCTTTCCGTG 97689 Query 47926 ----ATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGG 47981 || || | | | || ||||| | || ||||||||| ||||| | || Sbjct 97688 GTGAATCGCAGCAACACCGCAAGTGATCTTTCTCGTAACAAAAGTTCTTCCACGACGAGG 97629 Query 47982 AGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTT 48041 |||||| ||||| || || || || | || ||| ||||| | |||||||||||| Sbjct 97628 AGATTCGTGATTGAAGAGGATTCCGTTGGTAAGATGCATACCGTAGGCTTCACGATAGTT 97569 Query 48042 CTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGG 48101 | |||||| | |||| | || || || | || || ||||| |||||||| || Sbjct 97568 GACAAGAATCCAGAAGGCATACTGCTTGGCGACCGCGTAGGGCGAACGAGGATAGAAGGG 97509 Query 48102 TGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTG 48161 || ||||| | || || || || ||||| || || ||||||||||| ||||| || Sbjct 97508 AGTCGTCTCGGATTGCGGGACTTCCTGAACCTTCCCGTAGAGTTCACTGGTCGATGCCTG 97449 Query 48162 ATAGA 48166 ||||| Sbjct 97448 ATAGA 97444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665491945989400