Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq194 111 2e-19 seq232 91.5 2e-13 seq82 87.8 3e-12 >seq194 Length=282305 Score = 111 bits (122), Expect = 2e-19 Identities = 211/309 (68%), Gaps = 4/309 (1%) Strand=Plus/Plus Query 18398 AACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATT 18457 ||||||| ||||||||| |||| || || || || || || | || || ||| | Sbjct 116038 AACAAATGATCTTTTTCCTTGGGGTCACGAATGTAGGTATCAATGAGTAACGAGTACGTC 116097 Query 18458 TCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATAT 18517 ||| ||| ||| |||| | || || || || | |||||| | | || || || || Sbjct 116098 TCACTATGAATGTTTTCGACGGCAATTTGGAATCCATAAAAACAGCGGGCTTCTGGTGAT 116157 Query 18518 TGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCG 18577 ||||| ||| || |||| ||| ||||||| ||||| || |||||||| | | || Sbjct 116158 TGAATTTCGGTACAAAAGTTTTGCGCCAAATTTTCATTCACAATACCGTCCGAGGCGGCA 116217 Query 18578 AAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGA--TTGTTCCATT 18635 || || |||||||| | | | || ||| ||| || || || | || ||||| | Sbjct 116218 AAGAACGCCAAAACGTGTGACACAAAGTGTCGTTCGTTG--CTGGACAAATTCTTCCAAT 116275 Query 18636 CATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGCCTGTT 18695 | | | ||| | | | ||||| |||||| | ||||| ||||| | |||||| | || Sbjct 116276 CTTGCAAATCACTGGCCAAATCAATTTCTTCGGCCGTCCAGAAAGAAGCTTCGGCTTTTT 116335 Query 18696 TGTACATTT 18704 ||||||||| Sbjct 116336 TGTACATTT 116344 >seq232 Length=134552 Score = 91.5 bits (100), Expect = 2e-13 Identities = 126/175 (72%), Gaps = 1/175 (1%) Strand=Plus/Minus Query 155838 AAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAAC 155897 ||||| ||||| |||||||||||||| | || ||||| || || | || || Sbjct 133254 AAAACTTTGACCGGAAAAACTATTACGCTTGACGTCGAGCCGTCGGACACGATCGATAAT 133195 Query 155898 GTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTAT 155957 || || | ||||| ||||| || ||||| || ||||| || || ||| | | |||| | Sbjct 133194 GTCAAGACCAAAATCCAAGACAAGGAAGGTATTCCTCCGGACCAGCAACGTCTCATTTTT 133135 Query 155958 GCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAAG 156012 |||||||||||| | |||||| | |||||| ||||| ||||| || |||| Sbjct 133134 GCCGGTAAGCAGTTGGAAGATGGACGCACTTTAAGCGATTACAATAT-TCAAAAG 133081 >seq82 Length=265081 Score = 87.8 bits (96), Expect = 3e-12 Identities = 134/190 (71%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 || || || ||| | ||||| |||||||||||||||||||| | || ||||| || Sbjct 263232 ATTCAGATTTTTGTCAAAACCTTGACTGGAAAAACTATTACGCTCGATGTCGAGCCGTCG 263173 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || || | || || ||||| || ||||| || ||||| || || Sbjct 263172 GACACGATTGATAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCTCCGGACCAG 263113 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | | |||| |||||| |||||| | || ||| | ||||| ||||| ||| Sbjct 263112 CAACGTCTCATTTTTGCCGGAAAGCAGTTGGAGGATGGACGCACTTTGAGCGATTACAAT 263053 Query 156003 ATATCCAAAG 156012 || || |||| Sbjct 263052 AT-TCAAAAG 263044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731869301222000