Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq67 118 2e-21 seq142 114 2e-20 >seq67 Length=439500 Score = 118 bits (130), Expect = 2e-21 Identities = 167/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 ||||||| ||| || || || || || || |||| ||||| |||||| ||||| Sbjct 2843 CCACCTCGAAGACGCAAAACCAAGTGCAAGGTAGATTCTTTCTGAATATTGTAATCACTC 2902 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 || | ||| | || |||||||||||||| || ||||| |||| ||||| || || || Sbjct 2903 AACGTACGTCCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGA 2962 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 ||||| || || ||||| || || | || || || || || || |||| || || Sbjct 2963 ATTCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGGCTCAACG 3022 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATTAT 172077 || || |||||||| ||||| || | ||| || | ||| || ||||| | |||| Sbjct 3023 TCCAGGGTAATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCATGATGTTAT 3077 >seq142 Length=241092 Score = 114 bits (126), Expect = 2e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 |||||||| || || || || || || || || | ||||| |||||| ||||| Sbjct 170316 ACCACCTCGGAGACGCAAAACCAAGTGCAAGGTGGATTCTTTTTGAATATTGTAATCACT 170375 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 |||| ||| | || |||||||||||||| || ||||| |||| ||||| || || || Sbjct 170376 CAAAGTACGTCCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGG 170435 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 ||||| || || ||||| || || | || || || || ||||| || | || || Sbjct 170436 AATTCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTATCCGAAGGCTCAAC 170495 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || |||||||| ||||| || | ||| || | ||| || ||||| Sbjct 170496 GTCCAGGGTAATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCAT 170543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905132662311000