Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq226 136 4e-27 seq168 123 2e-23 seq82 123 2e-23 seq41 118 1e-21 seq232 109 5e-19 seq142 107 2e-18 seq67 107 2e-18 seq10 107 2e-18 >seq226 Length=603765 Score = 136 bits (150), Expect = 4e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || | || || | ||||| || || || || ||||| || || || | Sbjct 86081 GATGCAGATTTTCGTCAAGACTTTGACCGGAAAGACCATCACCCTCGATGTTGAGCCCTC 86022 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || |||| || || || |||||| ||||| |||||||| || || |||| Sbjct 86021 TGACACCATCGACAACGTCAAGACCAA-GATCCAGGACAAGGAAGGAATTCCGCCTGATC 85963 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 |||| ||||||||||||||||| || ||||| ||||| | | || || || | Sbjct 85962 AACAGCGTTTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACGTTGAGCGACTACA 85903 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||| || ||||| || || || |||||||||||||| | |||||||| Sbjct 85902 ACATCCAGAAGGAGTCTACTCTTCACTTGGTGTTGCGTCTCCGCGGAGG 85854 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || | ||||| || || || || ||||| || || || | Sbjct 85852 ATGCAGATTTTCGTCAAGACTTTGACCGGAAAGACCATCACCCTCGATGTTGAGCCCTCT 85793 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || || || |||||| ||||| |||||||| || || ||||| Sbjct 85792 GACACCATCGACAACGTCAAGACCAA-GATCCAGGACAAGGAAGGAATTCCGCCTGATCA 85734 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| ||||||||||||||||| || ||||| ||||| | | || || || || Sbjct 85733 ACAGCGTTTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACGTTGAGCGACTACAA 85674 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||| || || || |||||||||||||| | ||||| || Sbjct 85673 CATCCAGAAGGAGTCTACTCTTCACTTGGTGTTGCGTCTCCGCGGTGG 85626 >seq168 Length=39825 Score = 123 bits (136), Expect = 2e-23 Identities = 585/919 (64%), Gaps = 23/919 (3%) Strand=Plus/Minus Query 139086 GGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAA 139145 ||| | |||||| || || ||| || || || |||| ||||||||||| | ||||| Sbjct 29414 GGCCAAGTTGCAGACGGCGGTTTCATCCGGTGCGGTGTACTCGACAATTTCCGTGCACAA 29355 Query 139146 ATTACTACACTTGATCGTACCTAAATTTTGTTGATT-GCTTTTTCGGTTACAAGCATCTT 139204 || ||| || ||||| || || | || || | ||||| || |||||||| | Sbjct 29354 GTTGGAACAACGAATGGTACCCAAGTTCTTCTGGTTCGACTTTTCA-TTGCAAGCATCCT 29296 Query 139205 TGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAAC---- 139260 |||| || || || || || |||||||||||||| | || | |||| |||| Sbjct 29295 TGTAGAGAATGTAAGGCGTTCCAGTTTCCACTTGCGAGTCCAAAATGGC---GAACCACA 29239 Query 139261 AAGTCCCTAGCTTGTA--TTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGA 139318 ||||| | |||| | ||||| || || | || | || ||||||||||| | Sbjct 29238 AAGTCTGTGCCTTGATGGTCTGACGAGCGC---GTCCTTCTTGTTCATACTTTTCGTACA 29182 Query 139319 GTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGA 139378 | | |||||| | |||||| || | ||| | | || | || || | | Sbjct 29181 ATGCCTCGAATTCAGCTCCGTAGCAATCGGCAAGTCCAGGTGCCTCATTGGGGCAGAACA 29122 Query 139379 GCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGA 139438 ||| | ||| ||||||| ||| ||||||||| ||| || | ||| | ||| Sbjct 29121 AACTCCAAGTGGAGTTTTCCTTGACTCGCTTCATGAACAAATCGGGCACCCAAAGCGCGT 29062 Query 139439 ACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTT-CATGTTAAGGAAA 139497 | | | ||| ||||| | ||| | || || | | | || | |||||| Sbjct 29061 AAAAGAGATCACGCGCACGATCG-CTTTCATTTCCGTGATTCTTGCGCAAATCAAGGAAT 29003 Query 139498 TCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTGCCA 139557 ||||| || || || ||||| || |||| |||| ||| || |||||| || |||||| Sbjct 29002 TCAAAGACATCGGCATGCCACGGCTCCAAATAGCAGGCAATACTGCCTTTACGCTTGCCA 28943 Query 139558 CCT---TGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCG 139614 || ||||| || | || | | || ||||| ||||| | ||| ||| | | |||| Sbjct 28942 CCACCCTGATCCACATAACGCGCCGTGTTGTTGAAGACGCGAAGCATGGGCACAATACCG 28883 Query 139615 CTCGCTGTTCCGTTGGTGCTACGGATG--GGACTGTTGCGAGCTCGGACGTCATGTACAT 139672 ||| |||||||||||| | || ||| ||| |||| ||||| | || || | Sbjct 28882 TTCGATGTTCCGTTGGTACCCCGAATGTAGGA--TTTGCTGGCTCGAATGTTGTGAATGG 28825 Query 139673 TGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGTAATGTCTCGTATA 139732 || ||||| || ||| | | ||||| || | |||| | | || ||||| | Sbjct 28824 CGAGACCGATACCTCCGGCGTACTTGGAGATGATGGCGCAGTTCTTGAGCGTATCGTAAA 28765 Query 139733 TACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTT 139792 ||||| || || | || ||| |||| || ||||| || || | ||| || | | Sbjct 28764 TACCTTCAATTGAATCCTGCTTCATGGTGAGCAAGAAGCACGATGACATTTGGGGCATGT 28705 Query 139793 TCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATT 139852 | || ||||| || || || || | |||||||| || | ||||| | | Sbjct 28704 TGGTTCCGGCGTTGAAGAGCGTGGGCGTAGCGTGCGTAAAGTACCGATTCGAAAGGTCGT 28645 Query 139853 CGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCA 139912 ||| || || ||| | | || || |||||| |||||||||| || ||||||| Sbjct 28644 TGTAGGTCTCAATGACTTTGGGGATGTCATCTCCGTGAATACCGACAGCAACACGCATCA 28585 Query 139913 GCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTA 139972 || ||| |||||||| | | || | ||||| || |||| || || | Sbjct 28584 ACAACAACTGGGGACGTTCGGCAATCTGTCCGTGCATTTTAAGGAGGTAACTCTTTTCGA 28525 Query 139973 GGGTCTTGTAGCCAAAGTA 139991 | || ||| | |||||||| Sbjct 28524 GTGTTTTGAATCCAAAGTA 28506 >seq82 Length=265081 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 || ||||| ||| | ||||| | || || ||||||||||||||||| || || | | Sbjct 263232 ATTCAGATTTTTGTCAAAACCTTGACTGGAAAAACTATTACGCTCGATGTCGAGCCGTCG 263173 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| |||||||| ||||| || ||||| || || Sbjct 263172 GACACGATTGATAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCTCCGGACCAG 263113 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | || |||||||| || ||| |||||||| | | || ||||| || Sbjct 263112 CAACGTCTCATTTTTGCCGGAAAGCAGTTGGAGGATGGACGCACTTTGAGCGATTACAAT 263053 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 |||||||||||| || | || | || |||||||||||||| ||| Sbjct 263052 ATTCAAAAGGAAAGTACTTTGCATCTTGTCTTGCGATTGCGCGGTGGC 263005 >seq41 Length=265118 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 || ||||| || | ||||| | ||||| ||||||||||||||||| || || | | Sbjct 262952 ATTCAGATTTTCGTCAAAACCTTGACCGGCAAAACTATTACGCTCGATGTCGAGCCGTCG 262893 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| |||||||| ||||| || || || || || Sbjct 262892 GACACGATCGATAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCGCCGGACCAG 262833 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | || |||||||| || ||| |||||||| | | || ||||| || Sbjct 262832 CAACGTCTCATTTTTGCCGGAAAGCAGTTGGAGGATGGACGCACTTTGAGCGATTACAAT 262773 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 |||||||||||| || | || | || |||||||||||||| ||| Sbjct 262772 ATTCAAAAGGAAAGTACTTTGCATCTCGTTTTGCGATTGCGCGGTGGC 262725 >seq232 Length=134552 Score = 109 bits (120), Expect = 5e-19 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 || ||||| || | ||||| | ||||| |||||||||||||| || || || | | Sbjct 133269 ATTCAGATTTTCGTCAAAACTTTGACCGGAAAAACTATTACGCTTGACGTCGAGCCGTCG 133210 Query 24764 GACACAGTAGAAACGGTAAA-ACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || || ||| ||||||||||| ||||| || ||||| || || Sbjct 133209 GACACGATCGATAATGTCAAGACCAAA-ATCCAAGACAAGGAAGGTATTCCTCCGGACCA 133151 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCA--GATTAT 24880 |||||| | || |||||||| || ||| |||| || | || || | | | ||||| Sbjct 133150 GCAACGTCTCATTTTTGCCGGTAAGCAGTTGGAAGA-TGGACGCAC-TTTAAGCGATTAC 133093 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || |||||||||||| || | || | || ||||||||||||| || Sbjct 133092 AATATTCAAAAGGAAAGCACTTTGCATCTTGTTCTGCGATTGCGCGGTGG 133043 >seq142 Length=241092 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || || || ||||| || ||||| || || || || | | Sbjct 170543 ATGCAAATTTTCGTAAAGACACTGACGGGTAAGACCATTACCCTGGACGTTGAGCCTTCG 170484 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| || || || |||||||||||| || ||||| || || ||||| Sbjct 170483 GATACGATCGACAACGTCAAGACCAA-GATCCAAGACAAGGAGGGAATTCCCCCGGATCA 170425 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||||| ||||| || ||||| ||||| |||| ||| | | || ||||| || Sbjct 170424 ACAACGATTGATTTTCGCCGGTAAACAATTGGAAGATGGACGTACTTTGAGTGATTACAA 170365 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 |||||||| ||||| || | |||||||| ||||| Sbjct 170364 TATTCAAAAAGAATCCACCTTGCACTTGGTTTTGCG 170329 >seq67 Length=439500 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || || || ||||| || ||||| || || || || | | Sbjct 3069 ATGCAAATTTTCGTAAAGACACTGACGGGTAAGACCATTACCCTGGACGTTGAGCCGTCG 3010 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || || || |||||||||||| || ||||| || || ||||| Sbjct 3009 GACACGATCGACAACGTCAAGACCAA-GATCCAAGACAAGGAGGGAATTCCCCCGGATCA 2951 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||||| ||||| || ||||| ||||| |||| ||| | | || ||||| || Sbjct 2950 ACAACGATTGATTTTCGCCGGTAAACAATTGGAAGATGGACGTACGTTGAGTGATTACAA 2891 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||||| || ||||| || | |||||||| ||||| Sbjct 2890 TATTCAGAAAGAATCTACCTTGCACTTGGTTTTGCG 2855 >seq10 Length=152390 Score = 107 bits (118), Expect = 2e-18 Identities = 235/347 (68%), Gaps = 9/347 (3%) Strand=Plus/Minus Query 139492 AGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGT 139551 ||||| ||||| || || || ||||| || |||| |||| ||| || |||||| || Sbjct 133395 AGGAACTCAAAGACATCGGCATGCCACGGCTCCAAATAGCAGGCAATACTGCCTTTGCGC 133336 Query 139552 TTGCCACCT---TGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCC 139608 |||||||| ||||| |||| || | | || ||||| ||||| | ||| ||| | Sbjct 133335 TTGCCACCACCCTGATCCACGTAACGCGCCGTGTTGTTGAAAACGCGAAGCATGGGCACA 133276 Query 139609 AGACCGCTCGCTGTTCCGTTGGTGCTACGGATG--GGACTGTTGCGAGCTCGGACGTCAT 139666 | |||| ||| ||||||||||| | || ||| ||| |||| ||||| | || | Sbjct 133275 ATACCGTTCGACGTTCCGTTGGTTCCGCGAATGTAGGA--TTTGCTGGCTCGAATGTTGT 133218 Query 139667 GTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGTAA-TGTC 139725 | | || ||||| || || || | ||||| || | |||| | | ||| || Sbjct 133217 GAATGGCGAGACCGATACCTCCAGCATACTTGGAGATGATGGCGCAGT-TCTTAAGCGTA 133159 Query 139726 TCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGC 139785 ||||| |||||| || ||| | || ||| |||| || ||||| ||||| | |||| Sbjct 133158 TCGTAGATACCTTCAATAGAGTCCTGCTTCATGGTGAGCAAGAAGCACGACGACATTTGC 133099 Query 139786 GGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA 139832 || | || || ||||| || || || || | |||||||| || Sbjct 133098 GGCATGTTGGTTCCGGCATTGAAGAGCGTGGGCGTAGCGTGCGTAAA 133052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449895941002600