Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq142 104 2e-17 seq67 96.9 3e-15 seq120 87.8 1e-12 seq41 86.0 5e-12 seq2 84.2 2e-11 >seq142 Length=241092 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || || || || | || || || ||||||||| | || |||||| Sbjct 170543 ATGCAAATTTTCGTAAAGACACTGACGGGTAAGACCATTACCCTGGACGTTGAGCCTTCG 170484 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| ||| | | || || ||||| ||||| || || | ||| ||||||| Sbjct 170483 GATACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGAATTCCCCCGGATCAA 170424 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| || | |||| || |||||||| |||| |||| | || || |||||||| Sbjct 170423 CAACGATTGATTTTCGCCGGTAAACAATTGGAAGATGGACGTACTTTGAGTGATTACAAT 170364 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||||||||| || |||||| |||| || | || ||||| || Sbjct 170363 ATTCAAAAAGAATCCACCTTGCACTTGGTTTTGCGTCTCCGAGGTGG 170317 >seq67 Length=439500 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || || || || | || || || ||||||||| | || ||||| Sbjct 3069 ATGCAAATTTTCGTAAAGACACTGACGGGTAAGACCATTACCCTGGACGTTGAGCCGTCG 3010 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | || || ||||| ||||| || || | ||| ||||||| Sbjct 3009 GACACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGAATTCCCCCGGATCAA 2950 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| || | |||| || |||||||| |||| |||| | || || |||||||| Sbjct 2949 CAACGATTGATTTTCGCCGGTAAACAATTGGAAGATGGACGTACGTTGAGTGATTACAAT 2890 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGA 110500 ||||| ||||||||||| |||||| |||| || | || ||||| ||| Sbjct 2889 ATTCAGAAAGAATCTACCTTGCACTTGGTTTTGCGTCTTCGAGGTGGA 2842 >seq120 Length=609189 Score = 87.8 bits (96), Expect = 1e-12 Identities = 161/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 110264 AGATTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACG 110323 |||| | ||||||||| || || || || || || || || ||||| || |||| Sbjct 561775 AGATCAATAATGCAAATCTTCGTAAAGACCTTGACGGGTAAGACCATCACGCTCGATGTC 561834 Query 110324 GAGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCC 110383 ||||| || ||| ||| | || || ||||| ||||| || || | || Sbjct 561835 GAGCCGTCTGACACTATCGATAATGTCAAGACCAAGATCCAGGACAAGGAGGGAATTCCT 561894 Query 110384 GTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCG 110443 ||||||||| | || |||| || || |||||| |||| |||| ||||| || | Sbjct 561895 CCGGATCAACAGCGTCTGATTTTCGCCGGAAAACAGTTGGAAGATGGTCGAACACTGTCC 561954 Query 110444 GATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||||||||| || |||||||| || ||||| |||| | || |||| || || Sbjct 561955 GATTACAACATCCAGAAAGAATCGACCTTGCATTTGGTTCTCCGATTGCGTGGTGG 562010 >seq41 Length=265118 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 || || || || |||||||| || ||||||||||| ||||| |||| ||||| Sbjct 262952 ATTCAGATTTTCGTCAAAACCTTGACCGGCAAAACTATTACGCTCGATGTCGAGCCGTCG 262893 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | || || |||||| ||||| ||||| | || ||| || Sbjct 262892 GACACGATCGATAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCGCCGGACCAG 262833 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | || |||| ||| || || ||| ||||||||| | || || |||||||| Sbjct 262832 CAACGTCTCATTTTTGCCGGAAAGCAGTTGGAGGATGGACGCACTTTGAGCGATTACAAT 262773 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||| ||| ||| ||||| | || || || |||| || || Sbjct 262772 ATTCAAAAGGAAAGTACTTTGCATCTCGTTTTGCGATTGCGCGGTGG 262726 >seq2 Length=622807 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 110264 AGATTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACG 110323 |||| | ||||||||| || || || || || || || || ||||| || |||| Sbjct 353083 AGATCAATAATGCAAATCTTCGTAAAGACCTTGACGGGTAAGACCATCACGCTCGATGTC 353024 Query 110324 GAGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCC 110383 ||||| || ||| ||| | || || ||||| ||||| || || | || Sbjct 353023 GAGCCGTCTGACACTATCGATAATGTCAAGACCAAGATCCAGGACAAGGAGGGAATTCCT 352964 Query 110384 GTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCG 110443 ||||||||| | | |||| || || |||||| |||| |||| ||||| || | Sbjct 352963 CCGGATCAACAGCGTTTGATTTTCGCCGGAAAACAGTTGGAAGATGGTCGAACACTGTCC 352904 Query 110444 GATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || ||||||||||| |||||||| || ||||| |||| | || |||| || || Sbjct 352903 GACTACAACATTCAGAAAGAATCGACCTTGCATTTGGTTCTCCGATTGCGTGGTGG 352848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840115705435