Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq2 104 2e-17 seq120 98.7 6e-16 seq226 93.3 3e-14 seq142 86.0 4e-12 seq67 86.0 4e-12 seq82 84.2 1e-11 >seq2 Length=622807 Score = 104 bits (114), Expect = 2e-17 Identities = 143/198 (72%), Gaps = 8/198 (4%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || ||||||||||| ||||| || || | || |||| |||| || ||||||||||| Sbjct 352884 TCTTTCTGAATGTTGTAGTCGGACAGTGTTCGACCATCTTCCAACTGTTTTCCGGCGAAA 352943 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| || || || || | || | ||||||||||| | || || ||||| || Sbjct 352944 ATCAAACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCCTGGATCTTGGTCTTGAC--AT 353001 Query 34907 GCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTT 34962 ||||||| ||| | ||||||||| | || |||||||| ||||| | |||||| Sbjct 353002 --TATCGATAGTGTCAGACGGCTCGACATCGAGCGTGATGGTCTTACCCGTCAAGGTCTT 353059 Query 34963 TACAAAGATCTGCATGAT 34980 ||| ||||| ||||| || Sbjct 353060 TACGAAGATTTGCATTAT 353077 >seq120 Length=609189 Score = 98.7 bits (108), Expect = 6e-16 Identities = 142/198 (72%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || ||||| ||||| || || || || | || |||| |||| || ||||||||||| Sbjct 561974 TCTTTCTGGATGTTGTAATCGGACAGTGTTCGACCATCTTCCAACTGTTTTCCGGCGAAA 561915 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 ||||| || || || || | || | ||||||||||| | || || ||||| || Sbjct 561914 ATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCCTGGATCTTGGTCTTGAC--AT 561857 Query 34907 GCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTT 34962 ||||||| ||| | ||||||||| | || |||||||| ||||| | |||||| Sbjct 561856 --TATCGATAGTGTCAGACGGCTCGACATCGAGCGTGATGGTCTTACCCGTCAAGGTCTT 561799 Query 34963 TACAAAGATCTGCATGAT 34980 ||| ||||| ||||| || Sbjct 561798 TACGAAGATTTGCATTAT 561781 >seq226 Length=603765 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||||| || ||||||||| ||||| ||||| | |||| | || || Sbjct 85644 ACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAACGTGCGGCCGTCCTCG 85703 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || ||||||||||| ||||||| || || || || |||| | || |||||||| | Sbjct 85704 AGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGAATTCCTTCCTTGTCCTGG 85763 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || || |||||| | || | ||| || ||| ||||| | ||| ||||||||| Sbjct 85764 ATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACATCGAGGGTGATGGTCTTT 85823 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | ||||| || || |||||||| Sbjct 85824 CCGGTCAAAGTCTTGACGAAAATCTGCAT 85852 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||||| || ||||||||| ||||| ||||| | |||| | || || Sbjct 85872 ACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAACGTGCGGCCGTCCTCG 85931 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || ||||||||||| ||||||| || || || || |||| | || |||||||| | Sbjct 85932 AGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGAATTCCTTCCTTGTCCTGG 85991 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || || |||||| | || | ||| || ||| ||||| | ||| ||||||||| Sbjct 85992 ATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACATCGAGGGTGATGGTCTTT 86051 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | ||||| || || |||||||| Sbjct 86052 CCGGTCAAAGTCTTGACGAAAATCTGCAT 86080 >seq142 Length=241092 Score = 86.0 bits (94), Expect = 4e-12 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 34821 CATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCT 34880 |||| |||| ||| || |||||||| |||| |||||| || || | || | ||||||| Sbjct 170387 CATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGAATTCCCTCCT 170446 Query 34881 TGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTA 34940 |||| | || || |||||| | |||| || | ||| || || | ||| | Sbjct 170447 TGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTATCCGAAGGCTCAACGTCCAGGGTAA 170506 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 ||||||| ||||| || |||||||| || || |||||||| Sbjct 170507 TGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCATGAT 170546 >seq67 Length=439500 Score = 86.0 bits (94), Expect = 4e-12 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 34821 CATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCT 34880 |||| |||| ||| || |||||||| |||| |||||| || || | || | ||||||| Sbjct 2913 CATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGAATTCCCTCCT 2972 Query 34881 TGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTA 34940 |||| | || || |||||| | |||| || | ||| || || | ||| | Sbjct 2973 TGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGGCTCAACGTCCAGGGTAA 3032 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 ||||||| ||||| || |||||||| || || |||||||| Sbjct 3033 TGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCATGAT 3072 >seq82 Length=265081 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || | ||| | || ||| || || | || || ||||| ||||| || || || Sbjct 263006 CCACCGCGCAATCGCAAGACAAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTC 263065 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | |||| |||| |||| ||||||||||| || || || ||||||||||| | || Sbjct 263066 AAAGTGCGTCCATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGAGGA 263125 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGT-TTGACGGATGCTATCGATTCATTGGCCTCGAC 34929 | || |||||||| || | | || || ||||| | |||| || | |||||| Sbjct 263126 ATACCTTCCTTGTC-TTGAATCTTGGTCTTGACATTATCAATCGTGTCCGACGGCTCGAC 263184 Query 34930 ATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGA 34979 ||| | || || || ||||| || | ||| || ||||| ||||| |||| Sbjct 263185 ATCGAGCGTAATAGTTTTTCCAGTCAAGGTTTTGACAAAAATCTGAATGA 263234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691629032605