Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq142 98.7 2e-15 seq232 95.1 2e-14 seq67 89.7 8e-13 seq82 87.8 3e-12 seq120 86.0 1e-11 >seq142 Length=241092 Score = 98.7 bits (108), Expect = 2e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| |||| ||| | || || || || ||||| | || || || | | | Sbjct 170542 TGCAAATTTTCGTAAAGACACTGACGGGTAAGACCATTACCCTGGACGTTGAGCCTTCGG 170483 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | || || || | || || ||| || || || ||||| || ||||||| Sbjct 170482 ATACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGAATTCCCCCGGATCAAC 170423 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || || | ||||| || ||||||||||| || ||| | || || | ||||| |||| Sbjct 170422 AACGATTGATTTTCGCCGGTAAACAATTGGAAGATGGACGTACTTTGAGTGATTACAATA 170363 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258 | ||||||||||| || | || || || || || | |||| ||| Sbjct 170362 TTCAAAAAGAATCCACCTTGCACTTGGTTTTGCGTCTCCGAGGTGGT 170316 >seq232 Length=134552 Score = 95.1 bits (104), Expect = 2e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 146034 CAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGAT 146093 || || ||| | ||||| || || |||||||| ||||| |||| || || | || Sbjct 133266 CAGATTTTCGTCAAAACTTTGACCGGAAAAACTATTACGCTTGACGTCGAGCCGTCGGAC 133207 Query 146094 ACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAA 146153 || || | ||||| || | ||||| ||| || ||||| ||||| || || || ||| Sbjct 133206 ACGATCGATAATGTCAAGACCAAAATCCAAGACAAGGAAGGTATTCCTCCGGACCAGCAA 133147 Query 146154 AGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATA 146213 | ||||||||||| ||||| || || || ||| | || |||| ||||| ||||| Sbjct 133146 CGTCTCATTTTTGCCGGTAAGCAGTTGGAAGATGGACGCACTTTAAGCGATTACAATATT 133087 Query 146214 CAAAAAGAATCGACTATCCATTTAGTATTACGATT 146248 ||||| ||| ||| | ||| | || | ||||| Sbjct 133086 CAAAAGGAAAGCACTTTGCATCTTGTTCTGCGATT 133052 >seq67 Length=439500 Score = 89.7 bits (98), Expect = 8e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| |||| ||| | || || || || ||||| | || || || | | Sbjct 3068 TGCAAATTTTCGTAAAGACACTGACGGGTAAGACCATTACCCTGGACGTTGAGCCGTCGG 3009 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | || || || | || || ||| || || || ||||| || ||||||| Sbjct 3008 ACACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGAATTCCCCCGGATCAAC 2949 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || || | ||||| || ||||||||||| || ||| | ||||| | ||||| |||| Sbjct 2948 AACGATTGATTTTCGCCGGTAAACAATTGGAAGATGGACGTACGTTGAGTGATTACAATA 2889 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | || |||||||| || | || || || || || Sbjct 2888 TTCAGAAAGAATCTACCTTGCACTTGGTTTTGCG 2855 >seq82 Length=265081 Score = 87.8 bits (96), Expect = 3e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 146046 AAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAAT 146105 ||||| || || |||||||| ||||| | ||||| || | || || ||| | ||| Sbjct 263217 AAAACCTTGACTGGAAAAACTATTACGCTCGATGTCGAGCCGTCGGACACGATTGATAAT 263158 Query 146106 GTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTT 146165 || || | || || ||| || ||||| ||||| || || || ||| | ||||||||| Sbjct 263157 GTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCTCCGGACCAGCAACGTCTCATTTTT 263098 Query 146166 GCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCG 146225 || || || || || || ||| | || || | ||||| ||||| ||||| ||| Sbjct 263097 GCCGGAAAGCAGTTGGAGGATGGACGCACTTTGAGCGATTACAATATTCAAAAGGAAAGT 263038 Query 146226 ACTATCCATTTAGTATTACGATT 146248 ||| | ||| | || || ||||| Sbjct 263037 ACTTTGCATCTTGTCTTGCGATT 263015 >seq120 Length=609189 Score = 86.0 bits (94), Expect = 1e-11 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| |||| || || || || || || || || | ||||| || | | Sbjct 561785 TGCAAATCTTCGTAAAGACCTTGACGGGTAAGACCATCACGCTCGATGTCGAGCCGTCTG 561844 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| | ||||| || | || || || || || || ||||| || ||||||| Sbjct 561845 ACACTATCGATAATGTCAAGACCAAGATCCAGGACAAGGAGGGAATTCCTCCGGATCAAC 561904 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || ||||| || || ||||| || || ||| | |||| | | ||||| || | Sbjct 561905 AGCGTCTGATTTTCGCCGGAAAACAGTTGGAAGATGGTCGAACACTGTCCGATTACAACA 561964 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATT 146248 | || ||||||||||| | ||||| || | ||||| Sbjct 561965 TCCAGAAAGAATCGACCTTGCATTTGGTTCTCCGATT 562001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786163501011400