Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq41 111 1e-19 seq142 104 2e-17 >seq41 Length=265118 Score = 111 bits (122), Expect = 1e-19 Identities = 167/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 29557 TGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC- 29615 || || || | ||| |||| || | ||| | || ||| |||||||| || ||||| Sbjct 262723 TGGCCACCGCGCAATCGCAAAACGAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCG 262782 Query 29616 CGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGG 29675 | ||| | |||| ||| || | || || || ||| | || | | |||||| ||||| Sbjct 262783 CTCAAAG-TGCGTCCATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGG 262841 Query 29676 CGGAATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTT 29734 ||||||||| || |||||||| ||| || || |||||| | || | ||||| || | | Sbjct 262842 CGGAATACCTTCCTTGTCTTG-AATCTTGGTCTTGACATTATCGATCGTGTCCGACGGCT 262900 Query 29735 CTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || || ||||||||||| || |||||||| || || ||||| || Sbjct 262901 CGACATCGAGCGTAATAGTTTTGCCGGTCAAGGTTTTGACGAAAATCTGAAT 262952 >seq142 Length=241092 Score = 104 bits (114), Expect = 2e-17 Identities = 157/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAG 29629 ||||| ||||| || | ||||||||||||||||| || ||||| | ||| || || Sbjct 170328 ACGCAAAACCAAGTGCAAGGTGGATTCTTTTTGAATATTGTAATCACTCAA-AGTACGTC 170386 Query 29630 AATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTT 29689 ||| || | |||||| || || | ||||||| ||| |||||||| ||||| ||||| | Sbjct 170387 CATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGAATTCCCTCCT 170446 Query 29690 TGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTT 29748 ||||||| || || || ||||| | || | || || ||| | || || || || || Sbjct 170447 TGTCTTG-GATCTTGGTCTTGACGTTGTCGATCGTATCCGAAGGCTCAACGTCCAGGGTA 170505 Query 29749 ATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || | || || || || || ||||| Sbjct 170506 ATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCAT 170543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385217815016595