Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq67 107 2e-18 seq41 105 7e-18 seq142 102 8e-17 seq232 100 3e-16 seq120 93.3 4e-14 seq82 89.7 5e-13 >seq67 Length=439500 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || ||||| | ||||||||| || || | ||||||||||| || || |||||||| ||| Sbjct 2843 CCACCTCGAAGACGCAAAACCAAGTGCAAGGTAGATTCTTTCTGAATATTGTAATCACTC 2902 Query 137245 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 | || | || | ||||| | ||||||||| || | |||| ||||| ||||| || || Sbjct 2903 AACGTACGTCCA-TCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGG 2961 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 || || || ||||| || || || | | || | |||||| | || || || Sbjct 2962 AATTCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGGCTCAAC 3021 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | || | ||||| || |||| ||| |||||||| |||||||| Sbjct 3022 GTCCAGGGTAATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCAT 3069 >seq41 Length=265118 Score = 105 bits (116), Expect = 7e-18 Identities = 164/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 137181 ATGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATC 137240 |||||| || || || |||||||| | ||| | ||| ||| ||||| || |||||||| Sbjct 262722 ATGGCCACCGCGCAATCGCAAAACGAGATGCAAAGTACTTTCCTTTTGAATATTGTAATC 262781 Query 137241 GCTCATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGG 137299 ||||| |||| || | || || | || || || ||| | || ||||||||||| || | Sbjct 262782 GCTCAAAGTGCGTCCA-TCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCG 262840 Query 137300 GAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTT 137359 | || || ||||| ||||| ||| || || | | || | |||||| | || | Sbjct 262841 GCGGAATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTATCGATCGTGTCCGACGGCT 262900 Query 137360 CTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 | || || | || | || ||||||||||| ||||| ||||| || || || Sbjct 262901 CGACATCGAGCGTAATAGTTTTGCCGGTCAAGGTTTTGACGAAAATCTGAAT 262952 >seq142 Length=241092 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || ||||| | ||||||||| || || | || ||||||||||| || |||||||| ||| Sbjct 170317 CCACCTCGGAGACGCAAAACCAAGTGCAAGGTGGATTCTTTTTGAATATTGTAATCACTC 170376 Query 137245 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 | || | || | ||||| | ||||||||| || | |||| ||||| ||||| || || Sbjct 170377 AAAGTACGTCCA-TCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGG 170435 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 || || || ||||| || || || | | || | ||| || | || || || Sbjct 170436 AATTCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTATCCGAAGGCTCAAC 170495 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | || | ||||| || |||| ||| |||||||| |||||||| Sbjct 170496 GTCCAGGGTAATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCAT 170543 >seq232 Length=134552 Score = 100 bits (110), Expect = 3e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 137181 ATGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATC 137240 ||| || || || || |||| ||| | ||| | || ||| ||||| || |||||||| Sbjct 133039 ATGACCACCGCGCAATCGCAGAACAAGATGCAAAGTGCTTTCCTTTTGAATATTGTAATC 133098 Query 137241 GCTCATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGG 137299 ||| | |||| || | ||||| | || ||||| ||| | || ||||||||||| || | Sbjct 133099 GCTTAAAGTGCGTCCA-TCTTCCAACTGCTTACCGGCAAAAATGAGACGTTGCTGGTCCG 133157 Query 137300 GAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTT 137359 |||| || ||||| ||||| ||||| || | | || | |||||| | || | Sbjct 133158 GAGGAATACCTTCCTTGTCTTGGATTTTGGTCTTGACATTATCGATCGTGTCCGACGGCT 133217 Query 137360 CTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 | || |||| || | || || |||||||| ||||| ||||| || || || Sbjct 133218 CGACGTCAAGCGTAATAGTTTTTCCGGTCAAAGTTTTGACGAAAATCTGAAT 133269 >seq120 Length=609189 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || || || || | ||| ||||| | || |||||||| || |||||||||||| | Sbjct 562010 CCACCACGCAATCGGAGAACCAAATGCAAGGTCGATTCTTTCTGGATGTTGTAATCGGAC 561951 Query 137245 ATTGTGCTCGA--GTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 137302 | ||| |||| ||||| | ||||| || || | |||||||| || ||||| |||| Sbjct 561950 A--GTGTTCGACCATCTTCCAACTGTTTTCCGGCGAAAATCAGACGCTGTTGATCCGGAG 561893 Query 137303 GTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTA 137362 | || || || ||||| || || || | | || | ||||| | || || | Sbjct 561892 GAATTCCCTCCTTGTCCTGGATCTTGGTCTTGACATTATCGATAGTGTCAGACGGCTCGA 561833 Query 137363 CTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 | || | || | ||||| || ||||| || |||||||| |||||||| Sbjct 561832 CATCGAGCGTGATGGTCTTACCCGTCAAGGTCTTTACGAAGATTTGCAT 561784 >seq82 Length=265081 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 137182 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 137241 ||||| || || || ||||| || | ||| | ||| ||| ||||| || ||||||||| Sbjct 263003 TGGCCACCGCGCAATCGCAAGACAAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCG 263062 Query 137242 CTCATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGG 137300 |||| |||| || | || || | || || || ||| | || ||||||||||| || || Sbjct 263063 CTCAAAGTGCGTCCA-TCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGG 263121 Query 137301 AGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTC 137360 ||| || ||||| ||||| ||| || || | | || | |||||| | || || Sbjct 263122 AGGAATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTATCAATCGTGTCCGACGGCTC 263181 Query 137361 TACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || || | || | || || || ||||| ||||| || || || || || Sbjct 263182 GACATCGAGCGTAATAGTTTTTCCAGTCAAGGTTTTGACAAAAATCTGAAT 263232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488542198494000