Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq120 149 1e-30 seq2 140 6e-28 seq67 138 2e-27 seq31 120 6e-22 seq226 116 7e-21 seq82 104 5e-17 seq41 98.7 2e-15 >seq120 Length=609189 Score = 149 bits (164), Expect = 1e-30 Identities = 172/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| || | ||| || ||||| || |||| || ||||||||||| || || ||||| || Sbjct 562011 ACCACCACGCAATCGGAGAACCAAATGCAAGGTCGATTCTTTCTGGATGTTGTAATCGGA 561952 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || ||| ||| ||||| | |||||||| || || || || | |||||||| ||||| Sbjct 561951 CAGTGTTCGACCATCTTCCAACTGTTTTCCGGCGAAAATCAGACGCTGTTGATCCGGAGG 561892 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 ||||| ||||| || || ||||| | || ||||| || || || ||| || || || Sbjct 561891 AATTCCCTCCTTGTCCTGGATCTTGGTCTTGACATTATCGATAGTGTCAGACGGCTCGAC 561832 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814 || | || || ||||| || ||||| |||||||| || || ||||||||| Sbjct 561831 ATCGAGCGTGATGGTCTTACCCGTCAAGGTCTTTACGAAGATTTGCATTATT 561780 >seq2 Length=622807 Score = 140 bits (154), Expect = 6e-28 Identities = 170/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| || | ||| || ||||| || |||| || ||||||||||| || || || || || Sbjct 352847 ACCACCACGCAATCGGAGAACCAAATGCAAGGTCGATTCTTTCTGAATGTTGTAGTCGGA 352906 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || ||| ||| ||||| | |||||||| || || || | | |||||||| ||||| Sbjct 352907 CAGTGTTCGACCATCTTCCAACTGTTTTCCGGCGAAAATCAAACGCTGTTGATCCGGAGG 352966 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 ||||| ||||| || || ||||| | || ||||| || || || ||| || || || Sbjct 352967 AATTCCCTCCTTGTCCTGGATCTTGGTCTTGACATTATCGATAGTGTCAGACGGCTCGAC 353026 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814 || | || || ||||| || ||||| |||||||| || || ||||||||| Sbjct 353027 ATCGAGCGTGATGGTCTTACCCGTCAAGGTCTTTACGAAGATTTGCATTATT 353078 >seq67 Length=439500 Score = 138 bits (152), Expect = 2e-27 Identities = 172/236 (73%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || |||| | ||||| ||| ||||||| |||||||||||||| ||||| |||||| Sbjct 2843 CCACCTCGAAGACGCAAAACCAAGTGCAAGGTAGATTCTTTCTGAATATTGTAATCACTC 2902 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | || ||||| | |||||| || || || || | || ||||||||| || || Sbjct 2903 AACGTACGTCCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGA 2962 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||| ||||| ||||| ||||| | || || || || ||||| || || || || Sbjct 2963 ATTCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGGCTCAACG 3022 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTATATT 82819 |||| || || ||||| || |||| |||||||| || || ||||| || |||| Sbjct 3023 TCCAGGGTAATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCATGATGTTATT 3078 >seq31 Length=904706 Score = 120 bits (132), Expect = 6e-22 Identities = 193/274 (70%), Gaps = 4/274 (1%) Strand=Plus/Plus Query 198327 ACACATGACCCTCTATGGAATGCATCGCAAATACAGATGATAAGAGAAGGAAAAATGCAT 198386 ||||| ||| ||||||| || |||| | ||| | | |||||||| |||||| Sbjct 56393 ACACACGACGAATTATGGAACGCCGCGCAGCTCCAGTTAGTGAGAGAAGGTGGCATGCAT 56452 Query 198387 AGTTTTTTAAGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACACCGGAAGAC 198446 |||| | |||||||| ||||| |||||||| ||||||||||| |||| ||| | Sbjct 56453 GGTTTCATGAGAATGTATTGGGCGAAAAAGATTCTTGAATGGACCGAGTCACCAGAAATC 56512 Query 198447 GCTTTGAGTTATAGTATCTATCTAAACAATAAGTACGAACTAGACGGCACGGATCCTAAC 198506 ||||||| ||| || | || | | |||| || ||||| | ||||||||| Sbjct 56513 GCTTTGAAAACGAGTCAATACTTCAATGACAGATACGCGCTTGACGGAAAAGATCCTAAC 56572 Query 198507 GGATACGTAG--GTTGTATGTGGTCTATTTGCGGATTACATGATCGAGCGTGGAAAGAAA 198564 |||| || | |||| ||| || | || | ||| || |||| || ||| |||||| Sbjct 56573 GGATTTGTTGGAGTTGGATGGAGTAT-CATGGGCATT-CACGATCAAGGCTGGCAAGAAA 56630 Query 198565 GACCTATATTTGGGAAGATAAGATATATGAATTA 198598 ||||| | ||||| ||||| ||||| |||||||| Sbjct 56631 GACCTGTCTTTGGCAAGATTAGATACATGAATTA 56664 >seq226 Length=603765 Score = 116 bits (128), Expect = 7e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||| | | ||||| || ||||| |||||||| || ||||| || || || || Sbjct 85852 TACCTCCGCGGAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGC 85911 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | ||||| || || || ||||| |||||||| | | |||||||| || | Sbjct 85912 TCAACGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCG 85971 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | ||||||||||| || || ||||| | || || || || || || ||| || || | Sbjct 85972 GAATTCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAA 86031 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | || || ||||| || ||||| ||||| || || |||||||| Sbjct 86032 CATCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 86080 Score = 116 bits (128), Expect = 7e-21 Identities = 184/261 (70%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 198339 CTATGGAATGCATCGCAAATACAGATGATAAGAGAAGGAAAAATGCATAGTTTTTTAAGA 198398 || |||||||| |||| | ||| || | |||||||| |||||| |||| | ||| Sbjct 209368 CTTTGGAATGCGGCGCAGCTCCAGTTGGTGAGAGAAGGTGGCATGCATGGTTTCATGAGA 209309 Query 198399 ATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACACCGGAAGACGCTTTGAGTTAT 198458 ||||||||||| |||||||| ||||||||||| |||||||| ||||| | Sbjct 209308 ATGTACTGGGCGAAAAAGATTCTTGAATGGACTGAGTCACCGGAAATTGCTTTAAAAACG 209249 Query 198459 AGTATCTATCTAAACAATAAGTACGAACTAGACGGCACGGATCCTAACGGATACGTAGGT 198518 ||| || | || | | || | || ||||| | ||||||||||||| ||| || Sbjct 209248 AGTCAATACTTCAATGACAGATATGCGCTTGACGGAAAAGATCCTAACGGATTCGTTGGA 209189 Query 198519 TGTATGTGGTCTAT-TTGCGGATTACATGATCGAGCGTGGAAAGAAAGACCTATATTTGG 198577 | ||| ||| || | ||| || |||| || |||| |||||||||| | ||||| Sbjct 209188 GTTGGCTGGAGTATCATGGGTATT-CACGATCAAGGGTGGCAAGAAAGACCAGTTTTTGG 209130 Query 198578 GAAGATAAGATATATGAATTA 198598 || || ||||| |||||||| Sbjct 209129 AAAAATCAGATACATGAATTA 209109 Score = 111 bits (122), Expect = 3e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||||| || ||||| |||||||| || ||||| || || || || | | | || Sbjct 85637 ACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAACGTGCGGCC 85696 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||| || || || ||||| |||||||| | | |||||||| || || ||||||||||| Sbjct 85697 GTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGAATTCCTTCCTT 85756 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 || || ||||| | || || || || || || ||| || || || || | || || Sbjct 85757 GTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACATCGAGGGTGAT 85816 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || ||||| ||||| || || |||||||| Sbjct 85817 GGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 85852 >seq82 Length=265081 Score = 104 bits (114), Expect = 5e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | ||| |||| || | |||| |||| ||| || || ||||| ||||| Sbjct 263006 CCACCGCGCAATCGCAAGACAAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTC 263065 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | | || || || | || ||||| ||||| || || | ||| || || ||||| Sbjct 263066 AAAGTGCGTCCATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGAGGA 263125 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| ||||||||||| | || ||||| |||||||| || || || || Sbjct 263126 ATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTATCAATCGTGTCCGACGGCTCGACA 263185 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || || || || ||||| || || ||||| ||||| || Sbjct 263186 TCGAGCGTAATAGTTTTTCCAGTCAAGGTTTTGACAAAAATCTGAAT 263232 >seq41 Length=265118 Score = 98.7 bits (108), Expect = 2e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | ||| |||| ||| | |||| |||| ||| || || ||||| ||||| Sbjct 262726 CCACCGCGCAATCGCAAAACGAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTC 262785 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | | || || || | || ||||| ||||| || || | ||| || || || || Sbjct 262786 AAAGTGCGTCCATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGCGGA 262845 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| ||||||||||| | || ||||| || ||||| || || || || Sbjct 262846 ATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTATCGATCGTGTCCGACGGCTCGACA 262905 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || || ||||| ||||| || || || || ||||| || Sbjct 262906 TCGAGCGTAATAGTTTTGCCGGTCAAGGTTTTGACGAAAATCTGAAT 262952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981823489000005