Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq226 116 7e-21 seq31 107 3e-18 >seq226 Length=603765 Score = 116 bits (128), Expect = 7e-21 Identities = 184/261 (70%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 183022 CTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGCATAGTTTTTTACGA 183081 || |||||||| | || | ||| || |||||||||| |||||| |||| | || Sbjct 209368 CTTTGGAATGCGGCGCAGCTCCAGTTGGTGAGAGAAGGTGGCATGCATGGTTTCATGAGA 209309 Query 183082 ATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAGATGCTTTGAGTTAT 183141 ||||||||||| |||||||| ||||||||||| | |||||| |||||| | Sbjct 209308 ATGTACTGGGCGAAAAAGATTCTTGAATGGACTGAGTCACCGGAAATTGCTTTAAAAACG 209249 Query 183142 AGTATCTATATGAACAATAAGTACGAACTAGACGGTACGGATCCTAACGGATACGTAGGT 183201 ||| || | || | | || | || ||||| | ||||||||||||| ||| || Sbjct 209248 AGTCAATACTTCAATGACAGATATGCGCTTGACGGAAAAGATCCTAACGGATTCGTTGGA 209189 Query 183202 TGTATGTGGTCTAT-TTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCTATATTTGG 183260 | ||| ||| || | ||| |||||| || |||| |||||||||| | ||||| Sbjct 209188 GTTGGCTGGAGTATCATGGGTATT-CACGATCAAGGGTGGCAAGAAAGACCAGTTTTTGG 209130 Query 183261 AAAGATAAGATATATGAATTA 183281 ||| || ||||| |||||||| Sbjct 209129 AAAAATCAGATACATGAATTA 209109 >seq31 Length=904706 Score = 107 bits (118), Expect = 3e-18 Identities = 213/312 (68%), Gaps = 4/312 (1%) Strand=Plus/Plus Query 182972 AGTATATCTATTCTATTAAACAACTCGAAAAGGCAGAAACACATGACCCTCTATGGAATG 183031 || || |||| || | || | ||||| | | | | ||||| ||| ||||||| | Sbjct 56355 AGCATCTCTACTCAACGGAAGACCTCGAGCAAGGAAAGACACACGACGAATTATGGAACG 56414 Query 183032 CATCACAAATACAGATGATGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGG 183091 | | || | ||| | |||||||||| |||||| |||| | ||||||| |||| Sbjct 56415 CCGCGCAGCTCCAGTTAGTGAGAGAAGGTGGCATGCATGGTTTCATGAGAATGTATTGGG 56474 Query 183092 CTAAAAAGATACTTGAATGGACAAGAACTCCGGAAGATGCTTTGAGTTATAGTATCTATA 183151 | |||||||| ||||||||||| | || ||| ||||||| ||| || Sbjct 56475 CGAAAAAGATTCTTGAATGGACCGAGTCACCAGAAATCGCTTTGAAAACGAGTCAATACT 56534 Query 183152 TGAACAATAAGTACGAACTAGACGGTACGGATCCTAACGGATACGTAG--GTTGTATGTG 183209 | || | | |||| || ||||| | ||||||||||||| || | |||| ||| Sbjct 56535 TCAATGACAGATACGCGCTTGACGGAAAAGATCCTAACGGATTTGTTGGAGTTGGATGGA 56594 Query 183210 GTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAG 183269 || | || | ||| |||||| || ||| ||||||||||| | ||||| ||||| || Sbjct 56595 GTAT-CATGGGCATT-CACGATCAAGGCTGGCAAGAAAGACCTGTCTTTGGCAAGATTAG 56652 Query 183270 ATATATGAATTA 183281 ||| |||||||| Sbjct 56653 ATACATGAATTA 56664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903407868671200