Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq128 93.3 6e-14 seq61 93.3 6e-14 >seq128 Length=686783 Score = 93.3 bits (102), Expect = 6e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||| || ||||||||||| |||||| |||| ||||| | |||||||||||||||||||| Sbjct 560831 TTCCGCGATAGTATAGTGGCTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 560772 Query 8717 CCCCGACGAGGAGC 8730 ||||| || ||||| Sbjct 560771 CCCCGTCGCGGAGC 560758 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||| || ||||||||||| |||||| |||| ||||| | ||||||||||||||||||||| Sbjct 510934 TCCGCGATAGTATAGTGGCTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 510993 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 510994 CCCGTCGCGGAG 511005 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGG-TAGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||| || ||||||||||| |||||| |||| ||||| | ||||||||||||||||||||| Sbjct 510934 TCCGCGATAGTATAGTGGCTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 510993 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 510994 CCCGTCGCGGAG 511005 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGG-TAGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||| || ||||||||||| |||||| |||| ||||| | ||||||||||||||||||||| Sbjct 560830 TCCGCGATAGTATAGTGGCTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 560771 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 560770 CCCGTCGCGGAG 560759 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| || |||||| |||||||||||||||||| | |||| |||||||| || ||||| Sbjct 511006 ACTCCGCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAGCCACT 510947 Query 139412 ATACTAACGAGGAT 139425 |||||| || |||| Sbjct 510946 ATACTATCGCGGAT 510933 >seq61 Length=553271 Score = 93.3 bits (102), Expect = 6e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||| || ||||||||||| |||||| |||| ||||| | |||||||||||||||||||| Sbjct 10002 TTCCGCGATAGTATAGTGGCTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 10061 Query 8717 CCCCGACGAGGAGC 8730 ||||| || ||||| Sbjct 10062 CCCCGTCGCGGAGC 10075 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||| || ||||||||||| |||||| |||| ||||| | ||||||||||||||||||||| Sbjct 60550 TCCGCGATAGTATAGTGGCTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 60491 Query 8718 CCCGACGAGGAGC 8730 |||| || ||||| Sbjct 60490 CCCGTCGCGGAGC 60478 Score = 87.8 bits (96), Expect = 2e-12 Identities = 64/73 (88%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11729 GTCCTCGTTAGTATAGTGG-TAGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 |||| || ||||||||||| |||||| |||| ||||| | |||||||||||||||||||| Sbjct 60551 GTCCGCGATAGTATAGTGGCTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 60492 Query 11788 CCCCGACGAGGAG 11800 ||||| || |||| Sbjct 60491 CCCCGTCGCGGAG 60479 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGG-TAGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||| || ||||||||||| |||||| |||| ||||| | ||||||||||||||||||||| Sbjct 10003 TCCGCGATAGTATAGTGGCTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 10062 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 10063 CCCGTCGCGGAG 10074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652842392634800