Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq120 149 1e-30 seq2 136 9e-27 seq61 93.3 1e-13 seq128 91.5 3e-13 >seq120 Length=609189 Score = 149 bits (164), Expect = 1e-30 Identities = 279/403 (69%), Gaps = 8/403 (2%) Strand=Plus/Plus Query 110757 TTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAA 110816 |||||| |||| || ||||| |||||||| ||||||||||| | ||| | || ||| Sbjct 565038 TTTGCTGTCTACCTGGAACCGTGGCATTCTGATATATTTGATGTATTAAATCTCAAGAAA 565097 Query 110817 AATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGAT 110876 ||||| ||| ||||| || | ||||| || || || ||||| | |||||| | ||| Sbjct 565098 AATCACGGAAAAGAAGAGCATCGGGCACGAGACTTGTTCTATGCGCTTTGGATTCCGGAT 565157 Query 110877 TTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCT 110936 | || ||||||||||| ||||| |||| ||||| ||| ||||| |||| | | Sbjct 565158 CTGTTTATGAAACGTGTCGAAGAAGATGGAGTGTGGAGTCTGATGTGCCCTCGACAATGC 565217 Query 110937 CCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAA 110996 ||||| || | || || || | | ||||| | | ||||| | |||||||| Sbjct 565218 CCTGGGTTACCCGAGCAGTACGGGAGCGCTTTTGAGGTGTTATACGAGAGATATGAAAGG 565277 Query 110997 GAAGGCAAGTTTCG-CAAACAAATTCCAGCTCAAGAACTTTG--GTTCAAAATCCTTGAA 111053 ||||| | |||| ||||||||| ||| | |||||||| || | | || | | Sbjct 565278 GAAGG-TCGCTTCGTCAAACAAATCAGAGCACGCGAACTTTGGAGTGCCATAT--TACAG 565334 Query 111054 TCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGAT-CATATTAATCGCAAATC 111112 || ||| | || || || || || ||||| ||||| || ||| | | | || ||| Sbjct 565335 TCTCAAATCGAGACGGGTACGCCATATATGTTGTACAAGGATGCGTGCAACACG-AAAAG 565393 Query 111113 TAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGC 111155 ||| || | |||| ||||||| ||| ||| |||||| | ||| Sbjct 565394 TAACCAGAAGAATCTAGGAACGATTCAGTGCAGTAATCTCTGC 565436 >seq2 Length=622807 Score = 136 bits (150), Expect = 9e-27 Identities = 236/341 (69%), Gaps = 4/341 (1%) Strand=Plus/Minus Query 110757 TTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAA 110816 |||||| |||| || ||||| |||||||| ||||| ||||| | || | || ||| Sbjct 349766 TTTGCTGTCTACCTGGAACCATGGCATTCTGATATCTTTGATGTGTTGAATCTCAAGAAA 349707 Query 110817 AATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGAT 110876 ||||| ||| ||||| || | ||||| || || || ||||| | |||||| | ||| Sbjct 349706 AATCACGGAAAAGAAGAGCATCGGGCACGAGACTTGTTCTATGCGCTTTGGATTCCCGAT 349647 Query 110877 TTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCT 110936 | || |||||||||||| | ||| |||| |||||| ||| ||||| |||| | | Sbjct 349646 CTGTTTATGAAACGTGTTGAGGAAGATGGAATGTGGAGTCTGATGTGCCCTCGACAATGC 349587 Query 110937 CCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAA 110996 |||||| || | || || || | | |||||||| | ||||| ||| |||| Sbjct 349586 CCTGGTTTACCCGAACAGTACGGCAGCGCATTTGAAGAGTTATACGAGGGATACGAAAGG 349527 Query 110997 GAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTG--GTTCAAAATCCTTGAAT 111054 ||||| ||| ||| ||||| ||| | |||||||| || | | || | || | Sbjct 349526 GAAGGTCGCTTTGTCAAGCAAATCAGAGCACGCGAACTTTGGAGTGCCATAT--TAGAGT 349469 Query 111055 CACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGAT 111095 | ||| | ||||| || || || || || ||||| || ||| Sbjct 349468 CTCAAATCGAAACAGGTACGCCATACATGTTGTACAAGGAT 349428 >seq61 Length=553271 Score = 93.3 bits (102), Expect = 1e-13 Identities = 124/172 (72%), Gaps = 8/172 (5%) Strand=Plus/Plus Query 305318 GACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCT 305377 ||| ||||| ||||| |||||| | || || || || || ||| | || || ||||| Sbjct 199755 GACGATGATATCGTTCTTTTCAATCGACAGCCGTCCCTTCACAAAGTCTCCATTATGGCG 199814 Query 305378 CATAAAGTCAAAGTATTATCTGGATTG----ACATTTCGATTAAATGTAAGTGCTTGTAC 305433 ||| || ||||| |||||||| || ||||| || ||| | | |||||| | Sbjct 199815 CATCGGGTGAAAGTG----CTGGATTGGAAGACGTTTCGCTTTAATACATGCGCTTGTGC 199870 Query 305434 GCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485 || || ||||| ||||| ||||| ||||| |||||||||||| | || ||| Sbjct 199871 ACCCTACAATGCCGATTTCGATGGTGATGAGATGAATATGCATCTTCCACAA 199922 >seq128 Length=686783 Score = 91.5 bits (100), Expect = 3e-13 Identities = 131/184 (71%), Gaps = 8/184 (4%) Strand=Plus/Minus Query 305306 AGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATG 305365 ||||| || | ||| ||||| ||||| |||||| | || || || || || ||| | Sbjct 360986 AGACACATGGAAGACGATGATATTGTTCTTTTCAATCGTCAGCCGTCCCTTCACAAAGTC 360927 Query 305366 TCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTG----ACATTTCGATTAAATGT 305421 || || ||||||||| || ||||| |||||||| || || || || ||| Sbjct 360926 TCCATTATGGCTCATCGGGTGAAAGTG----CTGGATTGGAAGACTTTCCGCTTCAATAC 360871 Query 305422 AAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACC 305481 | | ||||| | || || || || ||||| ||||| |||||||||||||||||| | || Sbjct 360870 ATGCGCTTGCGCTCCGTACAACGCCGATTTCGATGGTGATGAAATGAATATGCATCTTCC 360811 Query 305482 TCAA 305485 ||| Sbjct 360810 GCAA 360807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186808314218495