Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq82 105 2e-17 seq41 105 2e-17 seq226 98.7 2e-15 seq67 95.1 3e-14 seq232 87.8 4e-12 seq120 87.8 4e-12 seq142 86.0 1e-11 >seq82 Length=265081 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| |||||| | || |||||||| || || | || || || || ||| Sbjct 263229 CAGATTTTTGTCAAAACCTTGACTGGAAAAACTATTACGCTCGATGTCGAGCCGTCGGAC 263170 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||||||||| || ||||| ||| |||||| ||| Sbjct 263169 ACGATTGATAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCTCCGGACCAGCAA 263110 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || || || ||||||||||||||||| |||||| | |||||| ||||||||| | Sbjct 263109 CGTCTCATTTTTGCCGGAAAGCAGTTGGAGGATGGACGCACTTTGAGCGATTACAATATT 263050 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || || || |||| | || ||||| ||| || Sbjct 263049 CAAAAGGAAAGTACTTTGCATCTTGTCTTGCGA 263017 >seq41 Length=265118 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| | || || ||||| || || | || || || || ||| Sbjct 262949 CAGATTTTCGTCAAAACCTTGACCGGCAAAACTATTACGCTCGATGTCGAGCCGTCGGAC 262890 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||||| || ||||| ||| ||||||| ||| Sbjct 262889 ACGATCGATAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCGCCGGACCAGCAA 262830 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || || || ||||||||||||||||| |||||| | |||||| ||||||||| | Sbjct 262829 CGTCTCATTTTTGCCGGAAAGCAGTTGGAGGATGGACGCACTTTGAGCGATTACAATATT 262770 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || || || |||| | || || |||||| || Sbjct 262769 CAAAAGGAAAGTACTTTGCATCTCGTTTTGCGA 262737 >seq226 Length=603765 Score = 98.7 bits (108), Expect = 2e-15 Identities = 156/221 (71%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || ||||| || ||||| | || || || |||||| Sbjct 85849 CAGATTTTCGTCAAGACTTTGACCGGAAAGACCATCACCCTCGATGTTGAGCCCTCTGAC 85790 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || ||||||||| ||| || |||| Sbjct 85789 ACCATCGACAACGTCAAGACCAAGATCCAGGACAAGGAAGGAATTCCGCCTGA---TCAA 85733 Query 206293 -AGACTT--ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349 || || ||||| |||||||||||| | || || || | || ||| ||| |||||| Sbjct 85732 CAGCGTTTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACGTTGAGCGACTACAAC 85673 Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||||| ||||||||||||||| | || ||| | || || Sbjct 85672 ATCCAGAAGGAGTCTACTCTTCACTTGGTGTTGCGTCTCCG 85632 Score = 98.7 bits (108), Expect = 2e-15 Identities = 156/221 (71%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || ||||| || ||||| | || || || |||||| Sbjct 86077 CAGATTTTCGTCAAGACTTTGACCGGAAAGACCATCACCCTCGATGTTGAGCCCTCTGAC 86018 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || ||||||||| ||| || |||| Sbjct 86017 ACCATCGACAACGTCAAGACCAAGATCCAGGACAAGGAAGGAATTCCGCCTGA---TCAA 85961 Query 206293 -AGACTT--ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349 || || ||||| |||||||||||| | || || || | || ||| ||| |||||| Sbjct 85960 CAGCGTTTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACGTTGAGCGACTACAAC 85901 Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||||| ||||||||||||||| | || ||| | || || Sbjct 85900 ATCCAGAAGGAGTCTACTCTTCACTTGGTGTTGCGTCTCCG 85860 >seq67 Length=439500 Score = 95.1 bits (104), Expect = 3e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || || || |||| || || || ||||| |||| Sbjct 3054 AAGACACTGACGGGTAAGACCATTACCCTGGACGTTGAGCCGTCGGACACGATCGACAAC 2995 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| ||||| || || |||||| ||||| ||| || | || ||| Sbjct 2994 GTCAAGACCAAGATCCAAGACAAGGAGGGAATTCCCCCGGATCAACAACGATTGATTTTC 2935 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| || || |||||||||||| | || ||| |||||||| | |||||||| ||| Sbjct 2934 GCCGGTAAACAATTGGAAGATGGACGTACGTTGAGTGATTACAATATTCAGAAAGAATCT 2875 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCGA 206391 || | ||| | |||||| | |||||| Sbjct 2874 ACCTTGCACTTGGTTTTGCGTCTTCGA 2848 >seq232 Length=134552 Score = 87.8 bits (96), Expect = 4e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| | || |||||||| || || | || || || || ||| Sbjct 133266 CAGATTTTCGTCAAAACTTTGACCGGAAAAACTATTACGCTTGACGTCGAGCCGTCGGAC 133207 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| || || ||||| || ||||| ||| |||||| ||| Sbjct 133206 ACGATCGATAATGTCAAGACCAAAATCCAAGACAAGGAAGGTATTCCTCCGGACCAGCAA 133147 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || || || ||||| |||||||||||||||||| | ||||| ||||||||| | Sbjct 133146 CGTCTCATTTTTGCCGGTAAGCAGTTGGAAGATGGACGCACTTTAAGCGATTACAATATT 133087 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || || || ||| | || |||||| || || Sbjct 133086 CAAAAGGAAAGCACTTTGCATCTTGTTCTGCGA 133054 >seq120 Length=609189 Score = 87.8 bits (96), Expect = 4e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || ||||| | || || || |||||||| |||| || ||| Sbjct 561808 ACGGGTAAGACCATCACGCTCGATGTCGAGCCGTCTGACACTATCGATAATGTCAAGACC 561867 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || || || |||||| ||||| || | || || ||||||||||| Sbjct 561868 AAGATCCAGGACAAGGAGGGAATTCCTCCGGATCAACAGCGTCTGATTTTCGCCGGAAAA 561927 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTAC 206366 |||||||||||||| | || || ||||||||||| |||||||||| || || Sbjct 561928 CAGTTGGAAGATGGTCGAACACTGTCCGATTACAACATCCAGAAAGAATCGAC 561980 >seq142 Length=241092 Score = 86.0 bits (94), Expect = 1e-11 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || || || |||| || || ||| || || |||| Sbjct 170528 AAGACACTGACGGGTAAGACCATTACCCTGGACGTTGAGCCTTCGGATACGATCGACAAC 170469 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| ||||| || || |||||| ||||| ||| || | || ||| Sbjct 170468 GTCAAGACCAAGATCCAAGACAAGGAGGGAATTCCCCCGGATCAACAACGATTGATTTTC 170409 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| || || |||||||||||| | |||||| |||||||| | || ||||| || Sbjct 170408 GCCGGTAAACAATTGGAAGATGGACGTACTTTGAGTGATTACAATATTCAAAAAGAATCC 170349 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCGA 206391 || | ||| | |||||| | || ||| Sbjct 170348 ACCTTGCACTTGGTTTTGCGTCTCCGA 170322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181816333086695