Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2 107 2e-18 seq120 104 2e-17 seq226 96.9 3e-15 seq142 95.1 1e-14 seq67 93.3 4e-14 >seq2 Length=622807 Score = 107 bits (118), Expect = 2e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 |||||| || | ||||||||| | | | || ||||| ||||||||||||||| || || Sbjct 352853 ACGCAATCGGAGAACCAAATGCAAGGTCGATTCTTTCTGAATGTTGTAGTCGGACAGTGT 352912 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || |||||| | |||||| |||| | || | |||||||||||| ||||| || || Sbjct 352913 TCGACCATCTTCCAACTGTTTTCCGGCGAAAATCAAACGCTGTTGATCCGGAGGAATTCC 352972 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || || || || || || | | || | ||| || | |||||| || |||| Sbjct 352973 CTCCTTGTCCTGGATCTTGGTCTTGACATTATCGATAGTGTCAGACGGCTCGACATCGAG 353032 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||| | || ||||| |||| || |||| ||| || ||||| Sbjct 353033 CGTGATGGTCTTACCCGTCAAGGTCTTTACGAAGATTTGCAT 353074 >seq120 Length=609189 Score = 104 bits (114), Expect = 2e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 |||||| || | ||||||||| | | | || ||||| || |||||||| ||| || || Sbjct 562005 ACGCAATCGGAGAACCAAATGCAAGGTCGATTCTTTCTGGATGTTGTAATCGGACAGTGT 561946 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || |||||| | |||||| |||| | || |||||||||||||| ||||| || || Sbjct 561945 TCGACCATCTTCCAACTGTTTTCCGGCGAAAATCAGACGCTGTTGATCCGGAGGAATTCC 561886 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || || || || || || | | || | ||| || | |||||| || |||| Sbjct 561885 CTCCTTGTCCTGGATCTTGGTCTTGACATTATCGATAGTGTCAGACGGCTCGACATCGAG 561826 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||| | || ||||| |||| || |||| ||| || ||||| Sbjct 561825 CGTGATGGTCTTACCCGTCAAGGTCTTTACGAAGATTTGCAT 561784 >seq226 Length=603765 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | ||||| || || |||||||||||||||| || || Sbjct 85866 CGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAACGTGCGGCCG 85925 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || |||||||| || |||| | |||| | |||||||||||| || || || ||||| || Sbjct 85926 TCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGAATTCCTTCCTTG 85985 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || || || | | || | || || | ||||| || |||| || | Sbjct 85986 TCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACATCGAGGGTGATG 86045 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGAC 132126 || || || |||| ||| || | |||||||||||| || Sbjct 86046 GTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCATCAC 86083 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | ||||| || || |||||||||||||||| || || Sbjct 85638 CGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAACGTGCGGCCG 85697 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || |||||||| || |||| | |||| | |||||||||||| || || || ||||| || Sbjct 85698 TCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGAATTCCTTCCTTG 85757 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || || || | | || | || || | ||||| || |||| || | Sbjct 85758 TCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACATCGAGGGTGATG 85817 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || |||| ||| || | |||||||||||| Sbjct 85818 GTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 85852 >seq142 Length=241092 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||||||||| || | | | || ||||||||||| ||||| || |||| ||||| | Sbjct 170329 CGCAAAACCAAGTGCAAGGTGGATTCTTTTTGAATATTGTAATCACTCAAAGTACGTCCA 170388 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | |||||||||| | || | || |||||||| || || || || || || Sbjct 170389 TCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGAATTCCCTCCTTG 170448 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || || || | | || | ||||| | ||||| || || | || | Sbjct 170449 TCTTGGATCTTGGTCTTGACGTTGTCGATCGTATCCGAAGGCTCAACGTCCAGGGTAATG 170508 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGA 132125 || ||||| ||||| || |||| |||||| ||||||| Sbjct 170509 GTCTTACCCGTCAGTGTCTTTACGAAAATTTGCATGA 170545 >seq67 Length=439500 Score = 93.3 bits (102), Expect = 4e-14 Identities = 163/236 (69%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||||||||| || | | | || ||||| ||||| ||||| || |||| ||||| | Sbjct 2855 CGCAAAACCAAGTGCAAGGTAGATTCTTTCTGAATATTGTAATCACTCAACGTACGTCCA 2914 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | |||||||||| | || | || |||||||| || || || || || || Sbjct 2915 TCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGAATTCCCTCCTTG 2974 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || || || | | || | || || | |||||| || || | || | Sbjct 2975 TCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGGCTCAACGTCCAGGGTAATG 3034 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGA-CTTATTAGATTCCTTTTC 132143 || ||||| ||||| || |||| |||||| ||||||| ||||| |||| |||| Sbjct 3035 GTCTTACCCGTCAGTGTCTTTACGAAAATTTGCATGATGTTATTCTATTCAGTTTC 3090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476609442496200