Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq142 96.9 3e-15 seq232 86.0 6e-12 seq41 86.0 6e-12 seq82 82.4 7e-11 seq67 82.4 7e-11 >seq142 Length=241092 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 || ||||||| | || ||||| ||| | || || || | || || | || || || || Sbjct 170547 CATCATGCAAATTTTCGTAAAGACACTGACGGGTAAGACCATTACCCTGGACGTTGA-GC 170489 Query 25231 CAACG-ATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCG 25289 | || |||| ||||| | || || || || || || ||||| || || || | Sbjct 170488 CTTCGGATACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGAATTCCCCCGG 170429 Query 25290 ATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATT 25349 |||| ||| || | |||| || ||| |||||| | ||||||| | | | | || |||| Sbjct 170428 ATCAACAACGATTGATTTTCGCCGGTAAACAATTGGAAGATGGACGTACTTTGAGTGATT 170369 Query 25350 ACAATATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386 ||||||||||||||||||||||| | || || || || Sbjct 170368 ACAATATTCAAAAAGAATCCACCTTGCACTTGGTTTT 170332 >seq232 Length=134552 Score = 86.0 bits (94), Expect = 6e-12 Identities = 131/184 (71%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACG-ATACTAT 25242 || || ||||| || ||||||||| | || ||| | || ||||| ||| || | || || Sbjct 133260 TTCGTCAAAACTTTGACCGGAAAAACTATTACGCTTGACGTCGA-GCCGTCGGACACGAT 133202 Query 25243 CGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACT 25302 ||| | || || ||||| || || || ||||| || || || |||||| | || Sbjct 133201 CGATAATGTCAAGACCAAAATCCAAGACAAGGAAGGTATTCCTCCGGACCAGCAACGTCT 133142 Query 25303 CATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAA 25362 ||||| | ||| || || | ||||||| | | | | |||||||||||||||||||| Sbjct 133141 CATTTTTGCCGGTAAGCAGTTGGAAGATGGACGCACTTTAAGCGATTACAATATTCAAAA 133082 Query 25363 AGAA 25366 ||| Sbjct 133081 GGAA 133078 >seq41 Length=265118 Score = 86.0 bits (94), Expect = 6e-12 Identities = 131/184 (71%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACG-ATACTAT 25242 || || ||||| || ||||| ||| | || ||| |||| ||||| ||| || | || || Sbjct 262943 TTCGTCAAAACCTTGACCGGCAAAACTATTACGCTCGATGTCGA-GCCGTCGGACACGAT 262885 Query 25243 CGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACT 25302 ||| | || || || ||| || || || ||||| ||||| || |||||| | || Sbjct 262884 CGATAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCGCCGGACCAGCAACGTCT 262825 Query 25303 CATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAA 25362 ||||| | ||| || || | || |||| | | | | |||||||||||||||||||| Sbjct 262824 CATTTTTGCCGGAAAGCAGTTGGAGGATGGACGCACTTTGAGCGATTACAATATTCAAAA 262765 Query 25363 AGAA 25366 ||| Sbjct 262764 GGAA 262761 >seq82 Length=265081 Score = 82.4 bits (90), Expect = 7e-11 Identities = 130/184 (71%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACG-ATACTAT 25242 ||||| ||||| || || |||||| | || ||| |||| ||||| ||| || | || || Sbjct 263223 TTTGTCAAAACCTTGACTGGAAAAACTATTACGCTCGATGTCGA-GCCGTCGGACACGAT 263165 Query 25243 CGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACT 25302 || | || || || ||| || || || ||||| || || || |||||| | || Sbjct 263164 TGATAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCTCCGGACCAGCAACGTCT 263105 Query 25303 CATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAA 25362 ||||| | ||| || || | || |||| | | | | |||||||||||||||||||| Sbjct 263104 CATTTTTGCCGGAAAGCAGTTGGAGGATGGACGCACTTTGAGCGATTACAATATTCAAAA 263045 Query 25363 AGAA 25366 ||| Sbjct 263044 GGAA 263041 >seq67 Length=439500 Score = 82.4 bits (90), Expect = 7e-11 Identities = 151/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 25169 AACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAA 25228 |||| ||||||| | || ||||| ||| | || || || | || || | || || || Sbjct 3075 AACATCATGCAAATTTTCGTAAAGACACTGACGGGTAAGACCATTACCCTGGACGTTGA- 3017 Query 25229 GCCAACG-ATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCC 25287 ||| || | || ||||| | || || || || || || ||||| || || || Sbjct 3016 GCCGTCGGACACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGAATTCCCCC 2957 Query 25288 CGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGA 25347 ||||| ||| || | |||| || ||| |||||| | ||||||| | | | || || Sbjct 2956 GGATCAACAACGATTGATTTTCGCCGGTAAACAATTGGAAGATGGACGTACGTTGAGTGA 2897 Query 25348 TTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386 |||||||||||| |||||||| ||| | || || || || Sbjct 2896 TTACAATATTCAGAAAGAATCTACCTTGCACTTGGTTTT 2858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445092758714400