Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq128 141 1e-28 seq61 98.7 1e-15 >seq128 Length=686783 Score = 141 bits (156), Expect = 1e-28 Identities = 336/500 (67%), Gaps = 11/500 (2%) Strand=Plus/Plus Query 147106 ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGG 147165 || |||||||| || | || || ||||| |||| |||||| |||| |||| ||| Sbjct 552070 ACATAAAACTGACAAAACATATGACACGGAGGCAACGCCATAATCGGCAAGTCCTTGGGA 552129 Query 147166 TTCCAGGCCGAGACCACCAGCCGCCTGCTCT-CGGGGTTCCTCTTAATCTCTTCGAT--A 147222 |||||||||| | || | |||| | ||| |||| | ||||||| | ||||| | Sbjct 552130 TTCCAGGCCGTCAAGACAATGCGCC-GATCTTCGGGATGATTCTTAATTTTATCGATGCA 552188 Query 147223 ACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAG-TCCACGTACCT 147281 | || || |||||||| | |||||| || ||| | | | ||| || |||| Sbjct 552189 ATCCGCC--AGCTGGTCGATGCCCTGTCCGGTGTAATCGG-CGTGCATATCTTTGTACTC 552245 Query 147282 GGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTG 147341 ||| |||||||| | |||||||||||||||||| || || ||||| ||| | || || Sbjct 552246 GGCTCCAAAGTGACGCCACTGGAAGCCGTACACGGGTCCAAGGTCCCCGACTTGTCGATG 552305 Query 147342 CGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCC 147401 || || ||| | | | |||||||||| | || || | | | ||||||||| | Sbjct 552306 CGTCAATCCCAACTGATCGAGAAACTCGCGCGAACCATTGCCATCCCAGATGTGAATATT 552365 Query 147402 CTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAA 147461 |||||||| ||| || || | || ||| |||| | |||||||| | || || || Sbjct 552366 CTTGGCGGCGAGATCATTCGCGTTCGTATTGCCCTGAATGAACCACAACAATTCTTCGGC 552425 Query 147462 AACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAACTG---GTCCCTCAGCGA 147518 || || ||||| || | |||||||| || | || || | ||| | ||| || Sbjct 552426 GACGCCTCTCCAGAACGTGCGTTTGGTGGTGAGTAACGGCAATCGACCGTCGCGCAGTGA 552485 Query 147519 ATACCTCGCCTGGTCCCCAAACACAGACAGCGTGCCCGTGCCCGTCCTGTCCTCCCTGCG 147578 | | | | || | ||||||| || | ||||| |||||||| | || | | || Sbjct 552486 AAAGCGCATTTGCGCACCAAACAGCGAGACGGTGCCGGTGCCCGTTCGATCGCCGCGTCG 552545 Query 147579 CGTCCCGTTCTCCAAAATCT 147598 |||| | || |||||||| Sbjct 552546 ATTCCCTTCCTGCAAAATCT 552565 Score = 102 bits (112), Expect = 1e-16 Identities = 157/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931 |||||||||||||| || ||||| || | | | || || || | || ||||| Sbjct 551767 ATCTTGAGCTTGGGAAACGGTCGAGGCTCACGCTCGAGTTGCTCCTTTAAGGCATCCACA 551826 Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991 || || | |||| |||||| || || | | ||| ||||| || |||||||| | || Sbjct 551827 TGATTCAAATAGATGTGCGCATCGCCAATGACGTGAACAAACTCTCCCGGCTTTCGTCCC 551886 Query 146992 GTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCC 147051 || || || || | ||||| || | || | |||||| || |||||||| || || || Sbjct 551887 GTGACTTGAGCAATCATGTGCGTCAAGAGAGCGTAGCTCGCAATGTTGAACGGTACTCCG 551946 Query 147052 AGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTC 147095 || ||||||||| | | ||| |||| ||| |||||||| || Sbjct 551947 AGTCCCATGTCCGCACTGCGCTGATACAACTGACACGAGAGTTC 551990 >seq61 Length=553271 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931 |||||||||||||| || || || || | | | || || ||||| | ||||| Sbjct 19102 ATCTTGAGCTTGGGAAACGGCCGAGGCTCGCGCTCGAGTTGCTCTTTCAAAGCATCCACA 19043 Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991 || || | |||| ||||| || || | | ||| ||||| || ||||| || | || Sbjct 19042 TGATTCAAATAGATATGCGCATCGCCAATGACGTGAACAAACTCTCCCGGTTTTCGTCCC 18983 Query 146992 GTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCC 147051 || ||||| || | ||||| || | || | |||||| || |||||||| || || || Sbjct 18982 GTAACGTGAGCGATCATGTGCGTCAAGAGAGCGTAGCTCGCAATGTTGAACGGAACTCCA 18923 Query 147052 AGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTC 147095 || ||||||||| | | ||| |||| ||| |||||||| || Sbjct 18922 AGCCCCATGTCCGCACTACGCTGATACAACTGACACGAGAGTTC 18879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583485848388000