Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq194 217 1e-51 seq98 206 2e-48 seq208 145 6e-30 seq103 129 5e-25 seq128 84.2 2e-11 >seq194 Length=282305 Score = 217 bits (240), Expect = 1e-51 Identities = 392/563 (70%), Gaps = 9/563 (2%) Strand=Plus/Minus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 || |||||||||||||||||||| | || || || ||||| || |||||| |||||||| Sbjct 116351 ATCTGGCAAATGTACAAAAAAGCCGAAGCTTCTTTCTGGACGGCCGAAGAAATTGATTTG 116292 Query 43790 ACTAAAGACTTAGCACATTGGATTGCATTAAAACCACAA-GAAAAACATTTTATATCTTT 43848 | | || || | |||||| | ||| | ||| ||| ||| ||| | || Sbjct 116291 GCCAGTGATTTGCAAGATTGGAA-GAATTTGTCCAGCAACGAACGACACTTTGTGTCACA 116233 Query 43849 GGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTT-AGTCGGT 43907 ||||||||||| ||||| || ||||| || || ||||||||||||| | | Sbjct 116232 CGTTTTGGCGTTCTTTGCCGCCTCGGACGGTATTGTGAATGAAAATTTGGCGCAAAACTT 116173 Query 43908 TTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAG 43967 ||| | ||| |||||| ||||||||| || ||||||||||| || ||||||||| | | Sbjct 116172 TTGTACC-GAAATTCAATCACCAGAAGCCCGCTGTTTTTATGGATTCCAAATTGCCGTCG 116114 Query 43968 AAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACG 44027 |||| |||||| || | |||| | || || ||||| ||||| || | | Sbjct 116113 AAAACATTCATAGTGAGACGTACTCGTTACTCATTGATACCTACATTCGTGACCCCAAGG 116054 Query 44028 AGAAGCATCGATTGTTTAATGCGATAGAAACAGTACC-TGCGATTAAACATAAAGCAGAC 44086 | || ||| ||||| || || || || || || || | | || | || || || Sbjct 116053 AAAAAGATCATTTGTTGCGGGCCATTGATACGGTCCCGTGTG-TACAAAAGAAGGCCAAC 115995 Query 44087 TGGGCCCTTAAATGG-ATAAATTCAA--ATGATTCTTTTGGAGAACGACTTGTCGCGTTT 44143 |||||| | ||||| | | ||| ||| ||| |||| ||||| ||||| ||| Sbjct 115994 TGGGCCTTGCAATGGTGTGACGCCAACCATGCTTCCTTTGCCGAACGTTGCGTCGCATTT 115935 Query 44144 GCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAA 44203 || | || ||||||||||||||||| || ||||| ||||| || ||| | |||||| Sbjct 115934 GCGGCCGTCGAAGGCATTTTCTTTTCCGGCTCGTTCTGTGCCATTTTCTGGCTCAAGAAA 115875 Query 44204 CGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTA 44263 || ||| | ||||| || | ||||| ||||| || || ||||| || ||||| | Sbjct 115874 CGGGGTCTTATGCCCGGTCTCTGCTTTTCCAATGAATTGATCAGTCGCGACGAAGGTCTG 115815 Query 44264 CATTGCGATTTTGCTTGCTTGTT 44286 ||||| |||||||| || ||||| Sbjct 115814 CATTGTGATTTTGCCTGTTTGTT 115792 >seq98 Length=427084 Score = 206 bits (228), Expect = 2e-48 Identities = 385/557 (69%), Gaps = 9/557 (2%) Strand=Plus/Minus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 || |||||||||||||||||||| | || || |||||||| || |||||| ||||| | Sbjct 135590 ATCTGGCAAATGTACAAAAAAGCCGAAGCTTCCTTTTGGACGGCCGAAGAAATTGATCTC 135531 Query 43790 ACTAAAGACTTAGCACATTGGATTGCATTAAAACCACAA-GAAAAACATTTTATATCTTT 43848 | | || || | |||||| |||| ||| ||| || ||| | || Sbjct 135530 GCCAGTGATTTGCAAGATTGGAAA-CATTTGTCGAGCAACGAACGTCACTTTGTGTCGCA 135472 Query 43849 GGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTT-AGTCGGT 43907 || |||||||| ||||| ||| |||||| || || ||||||||||||| | | Sbjct 135471 CGTGTTGGCGTTCTTTGCCGCGTCCGACGGCATTGTGAATGAAAATTTGGCACAAAACTT 135412 Query 43908 TTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAG 43967 ||| | ||| |||||| || ||||| || |||||||| || || ||||||||| | | Sbjct 135411 TTGTACC-GAAATTCAATCGCCGGAAGCCCGTTGTTTTTACGGATTCCAAATTGCCGTCG 135353 Query 43968 AAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACG 44027 |||| ||||| |||| || |||| |||| ||||||||||| ||| | | | Sbjct 135352 AAAACATTCACAGCGAAACCTATTCTCTTTTGATTGATACGTACATTCGCGATCCGAAAG 135293 Query 44028 AGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTA-AACATAAAGCAGAC 44086 ||||| ||| ||||| || || || || || || | | || || | || || | Sbjct 135292 AGAAGGATCATTTGTTGCGGGCCATTGATACGGTTCC-GTGTGTACAAAAGAAGGCCCAT 135234 Query 44087 TGGGCCCTTAAATGGATAAATTCAAATGA---TTCTTTTGGAGAACGACTTGTCGCGTTT 44143 |||||| | ||||| | | || | ||| |||| ||||| |||||| ||| Sbjct 135233 TGGGCCTTGCAATGGTGTGACGCGAACAACGCTTCCTTTGCGGAACGCTGTGTCGCCTTT 135174 Query 44144 GCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAA 44203 || | || ||||||||||||||||| || || ||| ||||| |||||| | |||||| Sbjct 135173 GCGGCCGTCGAAGGCATTTTCTTTTCCGGTTCCTTTTGTGCCATTTTTTGGCTCAAGAAA 135114 Query 44204 CGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTA 44263 || ||| | ||||| || | ||||| || || || || ||||| || ||||| | Sbjct 135113 CGGGGTCTCATGCCCGGTCTTTGCTTTTCCAACGAATTGATTAGTCGCGACGAAGGTCTG 135054 Query 44264 CATTGCGATTTTGCTTG 44280 ||||| |||||||| || Sbjct 135053 CATTGTGATTTTGCCTG 135037 >seq208 Length=180812 Score = 145 bits (160), Expect = 6e-30 Identities = 372/559 (67%), Gaps = 12/559 (2%) Strand=Plus/Plus Query 43707 TGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACA-GGCGTCATTT 43765 ||||||| |||||| || || | ||| | |||||||| || ||| ||| || ||| Sbjct 72483 TGTTTCCCATTCAACATGCCGATTTGTGGAACATGTACAAGCAA-CACGTGGCTTCGTTT 72541 Query 43766 TGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTAAAACCA 43825 ||||| || || ||| ||||| | | | | || | | ||||| | |||| || Sbjct 72542 TGGACGGCCGACGAAATTGATCTCAGTCAGGATGTTACCGATTGGCAATCCTTAACGTCA 72601 Query 43826 CAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTC 43885 ||| |||||| || | |||| ||||| || ||||||| ||| || || || Sbjct 72602 TCCGAACGACATTTCATCAGTATGGTCTTGGCCTTCTTTGCTGGTGCCGATGGTATTGTG 72661 Query 43886 AATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTT 43945 |||||||||| || ||| | ||||| | || ||||| || |||||| Sbjct 72662 GTGGAAAATTTGGCGGAACGATTTTGTCGGGAAGTGACGGTCCCGGAAGCCCGCTGTTTT 72721 Query 43946 TATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGAT 44005 ||||| || ||||| ||||| |||| |||||| |||| ||| ||||||| || ||| Sbjct 72722 TATGGATTCCAAATGGCCATGGAAAGCATTCATCAAGAAACCTACTGTCTTCTTATTGAT 72781 Query 44006 ACGTACAT---CAA-AGATGGGCACGAGAAGCATCGATTGTTTAATGCG-ATAGAAACAG 44060 |||||||| ||| || | ||| ||| | | ||| ||| ||| | || Sbjct 72782 ACGTACATTACCAATCCATCCGATCGACAAG----TACTCTTTGCGGCGCATACCCA-AG 72836 Query 44061 TACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCTT 44120 |||| | | ||||| | |||||| | | || ||| | | || | Sbjct 72837 TACCCAGTGTCCGTCGGAAAGCGGCCTGGGCACAGCGGTATATTGGTTCGGAAGCCTCCT 72896 Query 44121 TTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTG 44180 ||| ||||| | || || ||||| | |||||||| || |||||||| ||| | ||| Sbjct 72897 TTGCGGAACGGTTGGTGGCCTTTGCGGCCGTGGAAGGGATCTTCTTTTCGGGAGCTTTTT 72956 Query 44181 CGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGT 44240 ||||| |||||| | ||||||||||| ||||||| || ||||||||| ||||| Sbjct 72957 GTGCCATCTTTTGGCTCAAGAAACGAGGGCTGATGCCCGGTTTGACGTTTAGTAATGAAC 73016 Query 44241 TAATAAGTCGTGATGAAGG 44259 | || ||||| |||||||| Sbjct 73017 TCATTAGTCGCGATGAAGG 73035 >seq103 Length=133562 Score = 129 bits (142), Expect = 5e-25 Identities = 385/583 (66%), Gaps = 16/583 (3%) Strand=Plus/Plus Query 43707 TGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACA-GGCGTCATTT 43765 ||||||| |||||| | ||| | ||| | |||||||| || ||| ||| || ||| Sbjct 27082 TGTTTCCCATTCAACACGCCGACCTGTGGAACATGTACAAGCAA-CACGTGGCTTCCTTT 27140 Query 43766 TGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTAAAACCA 43825 ||||| || || ||| ||||| | | | |||| | | ||||| | || | ||| Sbjct 27141 TGGACGGCCGACGAAATTGATCTCAGTCAAGATGTCACCGATTGGCAGTCGTTGA--CCA 27198 Query 43826 CAA--GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAG 43883 | ||| |||||| || | |||| ||||| || ||||| | ||| ||||| | Sbjct 27199 CGTCCGAACGACATTTCATCAGTATGGTCTTGGCCTTCTTTGCCGGCGCCGATGGGATTG 27258 Query 43884 TCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTT 43943 | |||||||||| || ||| | ||||| | || ||||| || |||| Sbjct 27259 TGGTAGAAAATTTGGCGGAACGCTTTTGTCGGGAAGTGACGGTTCCGGAAGCGCGTTGTT 27318 Query 43944 TTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAG 44003 ||||||| || ||||| ||||| |||| |||||| |||| ||| |||| |||| | Sbjct 27319 TTTATGGATTCCAAATGGCCATGGAAAGCATTCATCAAGAAACCTACTGTCTGTTGATTG 27378 Query 44004 ATACGTACAT---CAA-AGATGGGCACGAGAAGCATCGATTGTTTAATGCG-ATAGAAAC 44058 |||||||||| ||| | | ||| ||| || | ||| ||| ||| || Sbjct 27379 ATACGTACATTACCAATCCCTCCGATCGACAAG--TC--CTCTTTGCGGCGCATACGAA- 27433 Query 44059 AGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTC 44118 ||| || | | ||||| | ||||| | || || ||| | | || Sbjct 27434 AGTCCCCAGTGTCCGTCGGAAAGCCGCGTGGGCGCAACGATACATTGGTTCGGAAGCGTC 27493 Query 44119 TTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTT 44178 |||| || ||| | || || ||||| | ||||||||||| |||||||| || | || Sbjct 27494 CTTTGCGGAGCGATTGGTGGCCTTTGCGGCCGTGGAAGGCATCTTCTTTTCGGGCGCCTT 27553 Query 44179 TGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGA 44238 | ||||| |||||| | |||||||| || | ||||| || |||||||| ||||| Sbjct 27554 TTGTGCCATTTTTTGGCTCAAGAAACGGGGACTCATGCCCGGATTGACGTTCAGCAATGA 27613 Query 44239 GTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGC 44281 | || |||||||||||||| || || || ||||| ||| Sbjct 27614 ACTCATTAGTCGTGATGAAGGATTGCACTGTTCGTTTGCCTGC 27656 >seq128 Length=686783 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 41099 TGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAA 41158 |||||| || ||||| |||||||| | | ||||||||||| || || ||||| || Sbjct 551991 TGAACTCTCGTGTCAGTTGTATCAGCGCAGTGCGGACATGGGACTCGGAGTACCGTTCAA 551932 Query 41159 CATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAAACCTGG 41218 ||| ||||| || ||||| | ||| | |||||||| || || || ||| || || Sbjct 551931 CATTGCGAGCTACGCTCTCTTGACGCACATGATTGCTCAAGTCACGGGACGAAAGCCGGG 551872 Query 41219 TGAATTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGAGCCGTTAAC 41278 || ||||||||| | || |||| || || || | ||||| | || | |||| Sbjct 551871 AGAGTTTGTTCACGTCATTGGCGATGCGCACATCTATTTGAATCATGTGGATGCCTTAAA 551812 Query 41279 AGAACAACTGACACGAAAACCTAGACCATTTCCAACGCT 41317 || ||||| || | ||| |||| ||||| | ||| Sbjct 551811 GGAGCAACTCGAGCGTGAGCCTCGACCGTTTCCCAAGCT 551773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397454571021475