Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq65 179 4e-40 seq134 172 6e-38 seq10 168 7e-37 seq168 159 4e-34 seq98 116 4e-21 seq194 98.7 1e-15 seq167 86.0 7e-12 >seq65 Length=514140 Score = 179 bits (198), Expect = 4e-40 Identities = 311/447 (70%), Gaps = 10/447 (2%) Strand=Plus/Minus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 |||||||| ||||| || ||||| |||| |||| ||| || | |||||||||||| || Sbjct 196316 CCAGTTCCAATACCATCCGCACCGTTCACGAGAACCATGGGAATGACAGGAACGTAAAAG 196257 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 || || || | | || || |||||| ||| ||||||| | ||| ||| ||| Sbjct 196256 TCCGGTTCGATCGTCATGCCATCGTCCAAACGGTAGTTGAGCAACTCATCGTCGTCGGGA 196197 Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCA 117331 | ||| ||| | || ||| | || || ||||| |||||||||| |||||| Sbjct 196196 TGGAAAATGGTGCGTGTAATCGGCTCAAGTCGCGTGAAGATGTAACGAGGCGAGGCAGCA 196137 Query 117332 TCCTTGCCACC-AGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTT 117390 ||||| || || | |||| |||||||||||||| || ||| ||| | ||| | || Sbjct 196136 TCCTTTCCTCCCATCAAG-CGCGTACCGAATTGACCCGCTGGCGTCAACAAGTTGATATT 196078 Query 117391 GTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACC 117450 ||||| || ||||| | ||||||| ||| || ||||| || || | || ||||| Sbjct 196077 GTTGGACCCGACAAAATCCTGAGCCATGTTCACGATCGTTCCCTGTAAAGATGCTTCACC 196018 Query 117451 ATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGA 117510 ||||||||||| | ||||| || | ||| || | |||||||||||| || | || Sbjct 196017 GTGGTGATACGCGGAATGCTCGGCAATGTAACCAGTCAGCTGAGCCACTTTGACTTCACC 195958 Query 117511 CGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATC 117570 |||| || ||||| || ||||| | |||||||| || ||||| | ||| Sbjct 195957 TTTCAGCTTACGCTTGAAACATGCATACAAGACCTTGCGTTGCGAAGGCTTGA----ATC 195902 Query 117571 CG-CCACGTG---AGGGATCGAACGCT 117593 || ||||| | ||| || ||||||| Sbjct 195901 CGTCCACGAGACAAGGAATGGAACGCT 195875 Score = 165 bits (182), Expect = 9e-36 Identities = 306/444 (69%), Gaps = 4/444 (1%) Strand=Plus/Minus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 || || || || || || |||||||| || |||| ||| || | | ||| ||||||| Sbjct 196316 CCAGTTCCAATACCATCCGCACCGTTCACGAGAACCATGGGAATGACAGGAACGTAAAAG 196257 Query 151936 TCCGGCTCCACC-TGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGG 151994 ||||| || | | | || || || |||| ||| || | | || ||| | || Sbjct 196256 TCCGGTTCGATCGTCATG-CCATCGTCCAAACGGTAGTTGAGCAACTCATCGTCGTCGGG 196198 Query 151995 ATCGAATATCCGTCGAGTCATAGGACTCAAA-CGCGTGAAGATGTATCGGGAGCTGGCCG 152053 || ||| || || || || || ||||| |||||||||||||| || | ||| | Sbjct 196197 ATGGAAAATGGTGCGTGTAATCGG-CTCAAGTCGCGTGAAGATGTAACGAGGCGAGGCAG 196139 Query 152054 CATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGT 152113 ||||||| || || || ||||| || || || || | ||| | | ||||| | Sbjct 196138 CATCCTTTCCTCCCATCAAGCGCGTACCGAATTGACCCGCTGGCGTCAACAAGTTGATAT 196079 Query 152114 TGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCAC 152173 |||||| || || |||| |||||||| ||||| ||||| ||||| | | ||||||| Sbjct 196078 TGTTGGACCCGACAAAATCCTGAGCCATGTTCACGATCGTTCCCTGTAAAGATGCTTCAC 196019 Query 152174 CGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCG 152233 ||||||||||||| | ||||| || ||||| || | || ||| ||||| || | || Sbjct 196018 CGTGGTGATACGCGGAATGCTCGGCAATGTAACCAGTCAGCTGAGCCACTTTGACTTCAC 195959 Query 152234 TCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCGT 152293 |||| || ||||| ||| || || | |||||||| || || || || || |||| Sbjct 195958 CTTTCAGCTTACGCTTGAAACATGCATACAAGACCTTGCGTTGCGAAGGCTTGAATCCGT 195899 Query 152294 CCACCACGTGAGGAATCGAACGCT 152317 |||| | |||||| ||||||| Sbjct 195898 CCACGAGACAAGGAATGGAACGCT 195875 >seq134 Length=485476 Score = 172 bits (190), Expect = 6e-38 Identities = 281/402 (70%), Gaps = 2/402 (0%) Strand=Plus/Minus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 |||||||| ||||| || ||||| |||| |||| ||| || | |||||||||||| || Sbjct 51856 CCAGTTCCAATACCATCCGCACCGTTCACTAGAACCATGGGAATGACAGGAACGTAAAAG 51797 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 || || || | || || |||||| ||| ||||||| | ||| ||| ||| Sbjct 51796 TCTGGTTCAATGGTCATGCCATCGTCCAAACGGTAGTTGAGCAACTCATCGTCGTCGGGA 51737 Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCA 117331 | ||| ||| | || ||| | || || |||||||||||||||| || ||| Sbjct 51736 TGGAAAATGGTGCGTGTAATCGGCTCAAGTCGCGTGAAAATGTAACGAGGCGAAGCGGCA 51677 Query 117332 TCCTTGCCACC-AGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTT 117390 |||||||| || | ||| ||||||||| ||||| || || ||| | || | || Sbjct 51676 TCCTTGCCGCCCATCAA-ACGCGTACCAAATTGACCGGCTGGTGTCAACAAATTAATATT 51618 Query 117391 GTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACC 117450 ||||| || ||||||| |||||||| ||| |||||||| || || | || ||||| Sbjct 51617 GTTGGACCCAACAAAGTCTTGAGCCATGTTCACAATCGTTCCCTGTAAAGATGCTTCACC 51558 Query 117451 ATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGA 117510 ||||||||||| | ||||| || | ||| || | |||||| ||||| || | || Sbjct 51557 GTGGTGATACGCGGAATGCTCGGCAATGTAACCAGTCAGCTGGGCCACTTTGACTTCACC 51498 Query 117511 CGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTG 117552 |||| || ||||| ||| ||||| | ||||| || || Sbjct 51497 TTTCAGCTTGCGCTTGAAGCATGCATACAAGACCTTTCGTTG 51456 Score = 129 bits (142), Expect = 6e-25 Identities = 297/443 (67%), Gaps = 6/443 (1%) Strand=Plus/Minus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 || || || || || || |||||||| || |||| ||| || | | ||| ||||||| Sbjct 51856 CCAGTTCCAATACCATCCGCACCGTTCACTAGAACCATGGGAATGACAGGAACGTAAAAG 51797 Query 151936 TCCGGCTCCACCTGTTGA--CCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCG 151993 || || || | || | | || || |||| ||| || | | || ||| | | Sbjct 51796 TCTGGTTCAA--TGGTCATGCCATCGTCCAAACGGTAGTTGAGCAACTCATCGTCGTCGG 51739 Query 151994 GATCGAATATCCGTCGAGTCATAGGACTCAAA-CGCGTGAAGATGTATCGGGAGCTGGCC 152052 ||| ||| || || || || || ||||| |||||||| ||||| || | || Sbjct 51738 GATGGAAAATGGTGCGTGTAATCGG-CTCAAGTCGCGTGAAAATGTAACGAGGCGAAGCG 51680 Query 152053 GCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGG 152112 ||||||||||| || || ||||| ||||| || || | || | | || | Sbjct 51679 GCATCCTTGCCGCCCATCAAACGCGTACCAAATTGACCGGCTGGTGTCAACAAATTAATA 51620 Query 152113 TTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCA 152172 ||||||| || || || | ||||||| ||||||||||| ||||| | | |||||| Sbjct 51619 TTGTTGGACCCAACAAAGTCTTGAGCCATGTTCACAATCGTTCCCTGTAAAGATGCTTCA 51560 Query 152173 CCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCC 152232 |||||||||||||| | ||||| || ||||| || | || ||| ||||| || | || Sbjct 51559 CCGTGGTGATACGCGGAATGCTCGGCAATGTAACCAGTCAGCTGGGCCACTTTGACTTCA 51500 Query 152233 GTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCG 152292 |||| || ||||| || || || | ||||| || || || || || || ||| Sbjct 51499 CCTTTCAGCTTGCGCTTGAAGCATGCATACAAGACCTTTCGTTGCGAAGGCTTGAATCCG 51440 Query 152293 TCCACCACGTGAGGAATCGAACG 152315 ||||| | |||||| ||||| Sbjct 51439 TCCACGAGACAAGGAATGGAACG 51417 >seq10 Length=152390 Score = 168 bits (186), Expect = 7e-37 Identities = 307/438 (70%), Gaps = 16/438 (4%) Strand=Plus/Plus Query 53269 GTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTC 53328 ||||||||||||||| ||||| || || ||||| || || || || || || ||||| Sbjct 133048 GTACTTTACGCACGCTACGCCCACGCTCTTCAATGCCGGAACCAACATGCCGCAAATGTC 133107 Query 53329 GAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAA 53388 | |||||| || | | |||||| | ||||| || || || |||||||| ||||| || Sbjct 133108 GTCGTGCTTCTTGCTCACCATGAAGCAGGACTCTATTGAAGGTATCTACGATACGCTTAA 133167 Query 53389 GGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC-CACTGCTCGAACGTCC 53447 | | || ||| ||||||||||| | || ||||||||| || | | | | ||| | | Sbjct 133168 GAACTGCGCCATCATCTCCAAGTATGCTGGAGGTATCGGTCTCGCCATTCAC-AACATTC 133226 Query 53448 GTGCGAACGGCACACC---AATCAAGGGGACGAACGG--CGTCGCCGATGGAATCGTGCC 53502 | || | ||| | | || || || ||||| ||||| | || || ||||| Sbjct 133227 GAGC---CAGCAAATCCTACATTCGCGGAACCAACGGAACGTCG--AACGGTATTGTGCC 133281 Query 53503 TATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAA 53562 ||||| ||||| |||||||||||||| || ||||| | ||||||||||| |||||||| Sbjct 133282 CATGCTTCGCGTTTTCAACAACACGGCGCGTTACGTGGATCAGGGTGGTGGCAAGCGCAA 133341 Query 53563 GGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCT 53622 || | ||| ||| | ||||||||||| ||||| | | ||||| || || | Sbjct 133342 AGGCAGTATTGCCTGCTATTTGGAGCCGTGGCATGCCGATGTCTTTGAGTTCCTGGATTT 133401 Query 53623 GCGTCTGAATCAGGGTGACG-AAGAGATGCGCTGC-CGTGACCTGTTTACAGCTCTGTGG 53680 ||| ||||| || | | ||| ||| || ||| ||||| || ||| || || ||| Sbjct 133402 GCGCAAAAATCACGGCAATGAAAGCGAT-CG-TGCGCGTGATCTATTTTACGCGCTTTGG 133459 Query 53681 ATTCCGGACCTCTTCATG 53698 | || || | |||||| Sbjct 133460 GTGCCCGATTTGTTCATG 133477 >seq168 Length=39825 Score = 159 bits (176), Expect = 4e-34 Identities = 305/438 (70%), Gaps = 16/438 (4%) Strand=Plus/Plus Query 53269 GTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTC 53328 ||||||||||||||| ||||| || || |||||||| || || || || || ||||| Sbjct 28661 GTACTTTACGCACGCTACGCCCACGCTCTTCAACGCCGGAACCAACATGCCCCAAATGTC 28720 Query 53329 GAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAA 53388 |||||| || | | |||||| | || || || || || || ||||| |||||||| Sbjct 28721 ATCGTGCTTCTTGCTCACCATGAAGCAGGATTCAATTGAAGGTATTTACGATACGCTCAA 28780 Query 53389 GGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC-CACTGCTCGAACGTCC 53447 | | || ||| ||||||||||| | || ||||||||| || | | | | ||| | | Sbjct 28781 GAACTGCGCCATCATCTCCAAGTACGCCGGAGGTATCGGTCTCGCCATTCAC-AACATTC 28839 Query 53448 GTGCGAACGGCACACC---AATCAAGGGGACGAACGG--CGTCGCCGATGGAATCGTGCC 53502 | || | ||| | | || ||| || ||||| | ||| | || || ||||| Sbjct 28840 GAGC---CAGCAAATCCTACATTCGGGGTACCAACGGAACATCG--AACGGTATTGTGCC 28894 Query 53503 TATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAA 53562 ||||| |||||||||||||||||||| || || || | ||||||||||| ||||| || Sbjct 28895 CATGCTTCGCGTCTTCAACAACACGGCGCGTTATGTGGATCAGGGTGGTGGCAAGCGTAA 28954 Query 53563 GGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCT 53622 || | ||| ||| | ||||||||||| ||||| | | || || || || | Sbjct 28955 AGGCAGTATTGCCTGCTATTTGGAGCCGTGGCATGCCGATGTCTTTGAATTCCTTGATTT 29014 Query 53623 GCGTCTGAATCAGGGTGACG-AAGAGATGCGCTGC-CGTGACCTGTTTACAGCTCTGTGG 53680 ||| |||||| || | | ||| ||| || ||| ||||| || ||| || || ||| Sbjct 29015 GCGCAAGAATCACGGAAATGAAAGCGAT-CG-TGCGCGTGATCTCTTTTACGCGCTTTGG 29072 Query 53681 ATTCCGGACCTCTTCATG 53698 | || || | |||||| Sbjct 29073 GTGCCCGATTTGTTCATG 29090 >seq98 Length=427084 Score = 116 bits (128), Expect = 4e-21 Identities = 121/159 (76%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809 |||||| || |||| ||||| || | || |||||||| || ||||| |||| || Sbjct 135039 GGCAAAATCACAATGCAGACCTTCGTCGCGACTAATCAATTCGTTGGAAAAGCAAAGACC 135098 Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGAT 74869 ||||| || || || ||||| | |||||| |||||||| |||||||| ||||| || Sbjct 135099 GGGCATGAGACCCCGTTTCTTGAGCCAAAAAATGGCACAAAAGGAACCGGAAAAGAAAAT 135158 Query 74870 GCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAA 74908 ||||||||| ||||||||||||| ||||| ||| || Sbjct 135159 GCCTTCGACGGCCGCAAAGGCGACACAGCGTTCCGCAAA 135197 >seq194 Length=282305 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809 |||||| || |||| ||||| || | || ||||||||||| ||||| | || || Sbjct 115800 GGCAAAATCACAATGCAGACCTTCGTCGCGACTGATCAATTCATTGGAAAAGCAGAGACC 115859 Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGAT 74869 |||||||| || || ||||| | ||| || ||||||||||| || || ||||| || Sbjct 115860 GGGCATAAGACCCCGTTTCTTGAGCCAGAAAATGGCACAGAACGAGCCGGAAAAGAAAAT 115919 Query 74870 GCCTTCGACACACGCAAAGGCGAC 74893 ||||||||| |||||| ||||| Sbjct 115920 GCCTTCGACGGCCGCAAATGCGAC 115943 >seq167 Length=323482 Score = 86.0 bits (94), Expect = 7e-12 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 124488 TCGATAAACTCACGGATGCTGTGCGTCTCACCCGT-GCCAATCACGAAATCTTCGGGAAT 124546 |||| || ||||| | |||||||||| ||||| ||||| ||| | || |||| | Sbjct 235777 TCGACGAATTCACGAACCGTGTGCGTCTCTCCCGTCGCCAAG-ACGTAGTCATCGGATGT 235835 Query 124547 CGACTGCTGCAACATAAGCCACATGGCTTGGACGTAGTCCTCTGCGTGCCCCCAGTCGCG 124606 ||||||||||| |||||| ||| |||||| || ||| || |||||||| || Sbjct 235836 TTCTTGCTGCAACATTCTCCACATACCTTCGACGTAATCACGTGCATGTCCCCAGTCACG 235895 Query 124607 CTTGGCATCCAGGTTTCCGAG 124627 ||||||||||| ||| ||||| Sbjct 235896 CTTGGCATCCAAGTTACCGAG 235916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547213982141000