Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq226 116 2e-21 seq232 104 1e-17 seq142 104 1e-17 seq67 100 2e-16 seq82 95.1 8e-15 seq41 95.1 8e-15 seq2 95.1 8e-15 seq120 91.5 9e-14 >seq226 Length=603765 Score = 116 bits (128), Expect = 2e-21 Identities = 161/221 (73%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAAT--CTGAAAGTGTTC 34546 |||||||||||||| || ||||| |||||| || ||||| || | || || ||| | Sbjct 85635 AGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAACGTG--C 85692 Query 34547 GCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCT 34606 | |||| || || || || |||||||| || ||||||||||| || ||||| | ||| | Sbjct 85693 GGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGAATTCCTT 85752 Query 34607 CCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACG 34665 ||||||| |||| || || || ||| | || ||||| | ||| || || | | Sbjct 85753 CCTTGTCCTGGATC-TTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACATCGAGG 85811 Query 34666 GTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || ||||| || || || || ||||||||||| Sbjct 85812 GTGATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 85852 Score = 116 bits (128), Expect = 2e-21 Identities = 161/221 (73%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAAT--CTGAAAGTGTTC 34546 |||||||||||||| || ||||| |||||| || ||||| || | || || ||| | Sbjct 85863 AGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAACGTG--C 85920 Query 34547 GCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCT 34606 | |||| || || || || |||||||| || ||||||||||| || ||||| | ||| | Sbjct 85921 GGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGTTGATCAGGCGGAATTCCTT 85980 Query 34607 CCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACG 34665 ||||||| |||| || || || ||| | || ||||| | ||| || || | | Sbjct 85981 CCTTGTCCTGGATC-TTGGTCTTGACGTTGTCGATGGTGTCAGAGGGCTCAACATCGAGG 86039 Query 34666 GTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || ||||| || || || || ||||||||||| Sbjct 86040 GTGATGGTCTTTCCGGTCAAAGTCTTGACGAAAATCTGCAT 86080 >seq232 Length=134552 Score = 104 bits (114), Expect = 1e-17 Identities = 157/219 (72%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 34492 CGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAAT--CTGAAAGTGTTCGCT 34549 |||| || | ||| | |||||| ||||||||||| || |||| || |||||| || Sbjct 133055 CGCAGAACAAGATGCAAAGTGCTTTCCTTTTGAATATTGTAATCGCTTAAAGTG--CGTC 133112 Query 34550 CGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCT 34609 | ||||| | || ||||||||||| || | ||| || |||||||| || | || |||| Sbjct 133113 CATCTTCCAACTGCTTACCGGCAAAAATGAGACGTTGCTGGTCCGGAGGAATACCTTCCT 133172 Query 34610 TGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTT 34668 ||||| ||| ||| || || || || || ||||| ||| || || | || Sbjct 133173 TGTCTTGGAT-TTTGGTCTTGACATTATCGATCGTGTCCGACGGCTCGACGTCAAGCGTA 133231 Query 34669 ATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || ||||| ||||| || ||||| || |||||||| ||| Sbjct 133232 ATAGTTTTTCCGGTCAAAGTTTTGACGAAAATCTGAATG 133270 >seq142 Length=241092 Score = 104 bits (114), Expect = 1e-17 Identities = 166/234 (71%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC--TG 34537 || |||| |||||||| ||||| || | ||| || |||||||| || ||||| | Sbjct 170317 CCACCTCGGAGACGCAAAACCAAGTGCAAGGTGGATTCTTTTTGAATATTGTAATCACTC 170376 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 ||||| || | ||||| | |||||||||||| || || || || ||||| ||||| | Sbjct 170377 AAAGTA--CGTCCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGG 170434 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCC 34656 | | ||||||||||||| |||| || || || ||| | || || || ||| Sbjct 170435 GAATTCCCTCCTTGTCTTGGATC-TTGGTCTTGACGTTGTCGATCGTATCCGAAGGCTCA 170493 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 || |||| ||| || || ||||| || | || || || ||||| |||||| || Sbjct 170494 ACGTCCAGGGTAATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCATGATG 170547 >seq67 Length=439500 Score = 100 bits (110), Expect = 2e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||| ||||||||| ||||| || | || || || ||||| || ||||| Sbjct 2843 CCACCTCGAAGACGCAAAACCAAGTGCAAGGTAGATTCTTTCTGAATATTGTAATCACTC 2902 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || || | ||||| | |||||||||||| || || || || ||||| ||||| || Sbjct 2903 AACGTACGTCCATCTTCCAATTGTTTACCGGCGAAAATCAATCGTTGTTGATCCGGGGGA 2962 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||||| |||| || || || ||| | || ||||| ||| || Sbjct 2963 ATTCCCTCCTTGTCTTGGATC-TTGGTCTTGACGTTGTCGATCGTGTCCGACGGCTCAAC 3021 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 |||| ||| || || ||||| || | || || || ||||| |||||| || Sbjct 3022 GTCCAGGGTAATGGTCTTACCCGTCAGTGTCTTTACGAAAATTTGCATGATG 3073 >seq82 Length=265081 Score = 95.1 bits (104), Expect = 8e-15 Identities = 155/219 (71%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 34492 CGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAAT--CTGAAAGTGTTCGCT 34549 ||||| || | ||| | ||| || ||||||||||| || |||| || |||||| || Sbjct 263018 CGCAAGACAAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTCAAAGTG--CGTC 263075 Query 34550 CGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCT 34609 | || || | || || |||||||| || | ||| || |||||||| || | || |||| Sbjct 263076 CATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGAGGAATACCTTCCT 263135 Query 34610 TGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTT 34668 ||||| ||| || || || || || ||| ||||| ||| || || | || Sbjct 263136 TGTCT-TGAATCTTGGTCTTGACATTATCAATCGTGTCCGACGGCTCGACATCGAGCGTA 263194 Query 34669 ATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || ||||| || || || ||||| ||||||||||| ||| Sbjct 263195 ATAGTTTTTCCAGTCAAGGTTTTGACAAAAATCTGAATG 263233 >seq41 Length=265118 Score = 95.1 bits (104), Expect = 8e-15 Identities = 155/219 (71%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 34492 CGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAAT--CTGAAAGTGTTCGCT 34549 ||||| || | ||| | ||| || ||||||||||| || |||| || |||||| || Sbjct 262738 CGCAAAACGAGATGCAAAGTACTTTCCTTTTGAATATTGTAATCGCTCAAAGTG--CGTC 262795 Query 34550 CGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCT 34609 | || || | || || |||||||| || | ||| || ||||||||||| | || |||| Sbjct 262796 CATCCTCCAACTGCTTTCCGGCAAAAATGAGACGTTGCTGGTCCGGCGGAATACCTTCCT 262855 Query 34610 TGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTT 34668 ||||| ||| || || || || || || ||||| ||| || || | || Sbjct 262856 TGTCT-TGAATCTTGGTCTTGACATTATCGATCGTGTCCGACGGCTCGACATCGAGCGTA 262914 Query 34669 ATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || ||||| ||||| || ||||| || |||||||| ||| Sbjct 262915 ATAGTTTTGCCGGTCAAGGTTTTGACGAAAATCTGAATG 262953 >seq2 Length=622807 Score = 95.1 bits (104), Expect = 8e-15 Identities = 158/223 (71%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||||||| | || || || |||||||| || || || |||||||| | ||||| Sbjct 352866 ACCAAATGCAAGGTCGATTCTTTCTGAATGTTGTAGTCGGACAGTGTTCGACCATCTTCC 352925 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | ||||| ||||| || || ||||||||||| ||||| || | |||||||||||| | Sbjct 352926 AACTGTTTTCCGGCGAAAATCAAACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCCTGG 352985 Query 34618 ATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||| || || || || || || ||||| ||| || || | || || || || Sbjct 352986 ATC-TTGGTCTTGACATTATCGATAGTGTCAGACGGCTCGACATCGAGCGTGATGGTCTT 353044 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCA-TGTTGAT-TGTAT 34717 ||| || || || || || || || |||| | ||||| ||||| Sbjct 353045 ACCCGTCAAGGTCTTTACGAAGATTTGCATTATTGATCTGTAT 353087 >seq120 Length=609189 Score = 91.5 bits (100), Expect = 9e-14 Identities = 157/223 (70%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||||||| | || || || || ||||| ||||| || |||||||| | ||||| Sbjct 561992 ACCAAATGCAAGGTCGATTCTTTCTGGATGTTGTAATCGGACAGTGTTCGACCATCTTCC 561933 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | ||||| ||||| || || | ||||||||| ||||| || | |||||||||||| | Sbjct 561932 AACTGTTTTCCGGCGAAAATCAGACGCTGTTGATCCGGAGGAATTCCCTCCTTGTCCTGG 561873 Query 34618 ATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||| || || || || || || ||||| ||| || || | || || || || Sbjct 561872 ATC-TTGGTCTTGACATTATCGATAGTGTCAGACGGCTCGACATCGAGCGTGATGGTCTT 561814 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCA-TGTTGAT-TGTAT 34717 ||| || || || || || || || |||| | ||||| ||||| Sbjct 561813 ACCCGTCAAGGTCTTTACGAAGATTTGCATTATTGATCTGTAT 561771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314728468448735