Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fistulifera_20solaris_20[genbank_20GCA_5F002217885.1_202017-06-26] 295 sequences; 49,736,633 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq2 149 5e-31 seq67 145 7e-30 seq120 143 2e-29 seq142 136 3e-27 seq232 132 4e-26 seq41 129 5e-25 seq82 125 6e-24 seq226 116 3e-21 >seq2 Length=622807 Score = 149 bits (164), Expect = 5e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || ||||| || |||| || ||| | || || || || || || ||||| Sbjct 353074 ATGCAAATCTTCGTAAAGACCTTGACGGGTAAGACCATCACGCTCGATGTCGAGCCGTCT 353015 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||| || || || || || |||||| Sbjct 353014 GACACTATCGATAATGTCAAGACCAAGATCCAGGACAAGGAGGGAATTCCTCCGGATCAA 352955 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||||| || | |||||| ||||| |||||||| || || | ||||| |||||| Sbjct 352954 CAGCGTTTGATTTTCGCCGGAAAACAGTTGGAAGATGGTCGAACACTGTCCGACTACAAC 352895 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| || || |||||||| ||||||||| | || ||||| ||||| Sbjct 352894 ATTCAGAAAGAATCGACCTTGCATTTGGTTCTCCGATTGCGTGGTGG 352848 >seq67 Length=439500 Score = 145 bits (160), Expect = 7e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || ||||| || ||||| || ||| | ||||| || || || || ||||| Sbjct 3070 CATGCAAATTTTCGTAAAGACACTGACGGGTAAGACCATTACCCTGGACGTTGAGCCGTC 3011 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| |||| || | ||||| || || |||||||| || || || || || ||||| Sbjct 3010 GGACACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGAATTCCCCCGGATCA 2951 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACA 27165 ||| || || || | |||||| |||||||||||||| | || |||| ||||||| Sbjct 2950 ACAACGATTGATTTTCGCCGGTAAACAATTGGAAGA-TGGACGTACGTTGAGTGATTACA 2892 Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 | ||||| || || || ||||| || |||||||||||| | || ||||| Sbjct 2891 ATATTCAGAAAGAATCTACCTTGCACTTGGTTTTGCGTCTTCGAGGTGG 2843 >seq120 Length=609189 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || ||||| || |||| || ||| | || || || || || || ||||| Sbjct 561784 ATGCAAATCTTCGTAAAGACCTTGACGGGTAAGACCATCACGCTCGATGTCGAGCCGTCT 561843 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||| || || || || || |||||| Sbjct 561844 GACACTATCGATAATGTCAAGACCAAGATCCAGGACAAGGAGGGAATTCCTCCGGATCAA 561903 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | |||||| ||||| |||||||| || || | |||||||||||| Sbjct 561904 CAGCGTCTGATTTTCGCCGGAAAACAGTTGGAAGATGGTCGAACACTGTCCGATTACAAC 561963 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || || || |||||||| ||||||||| | || ||||| ||||| Sbjct 561964 ATCCAGAAAGAATCGACCTTGCATTTGGTTCTCCGATTGCGTGGTGG 562010 >seq142 Length=241092 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || ||||| || ||||| || ||| | ||||| || || || || || || Sbjct 170544 CATGCAAATTTTCGTAAAGACACTGACGGGTAAGACCATTACCCTGGACGTTGAGCCTTC 170485 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || |||| || | ||||| || || |||||||| || || || || || ||||| Sbjct 170484 GGATACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGAATTCCCCCGGATCA 170425 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| || || || | |||||| |||||||||||||| | || | |||||||| Sbjct 170424 ACAACGATTGATTTTCGCCGGTAAACAATTGGAAGATGGACGTACTTTGAGTGATTACAA 170365 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||||||| || || ||||| || |||||||||||| | || ||||| Sbjct 170364 TATTCAAAAAGAATCCACCTTGCACTTGGTTTTGCGTCTCCGAGGTGG 170317 >seq232 Length=134552 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||| ||||| || || |||||| ||||||| || ||||||| ||||| || || ||||| Sbjct 133270 CATTCAGATTTTCGTCAAAACTTTGACCGGAAAAACTATTACGCTTGACGTCGAGCCGTC 133211 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| |||| || | ||||| ||||| |||||||| ||||| || || || || || Sbjct 133210 GGACACGATCGATAATGTCAAGACCAAAATCCAAGACAAGGAAGGTATTCCTCCGGACCA 133151 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || ||| | || | ||||| || || |||||||| | || | ||||||||| Sbjct 133150 GCAACGTCTCATTTTTGCCGGTAAGCAGTTGGAAGATGGACGCACTTTAAGCGATTACAA 133091 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||||||||| || || ||| | ||| |||| ||||| ||||| Sbjct 133090 TATTCAAAAGGAAAGCACTTTGCATCTTGTTCTGCGATTGCGCGGTGG 133043 >seq41 Length=265118 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||| ||||| || || ||||| |||||||||| ||||||| || || || || ||||| Sbjct 262953 CATTCAGATTTTCGTCAAAACCTTGACCGGCAAAACTATTACGCTCGATGTCGAGCCGTC 262894 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| |||| || | ||||| || ||||||||||| ||||| || || || || || Sbjct 262893 GGACACGATCGATAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCGCCGGACCA 262834 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || ||| | || | ||||| || || ||||| || | || | ||||||||| Sbjct 262833 GCAACGTCTCATTTTTGCCGGAAAGCAGTTGGAGGATGGACGCACTTTGAGCGATTACAA 262774 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||||||||||| || || ||| | |||||||| ||||| |||||| Sbjct 262773 TATTCAAAAGGAAAGTACTTTGCATCTCGTTTTGCGATTGCGCGGTGGC 262725 >seq82 Length=265081 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||| ||||| ||||| ||||| |||| || || ||||||| || || || || ||||| Sbjct 263233 CATTCAGATTTTTGTCAAAACCTTGACTGGAAAAACTATTACGCTCGATGTCGAGCCGTC 263174 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| ||||||| | ||||| || ||||||||||| ||||| || || || || || Sbjct 263173 GGACACGATTGATAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCTCCGGACCA 263114 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || ||| | || | ||||| || || ||||| || | || | ||||||||| Sbjct 263113 GCAACGTCTCATTTTTGCCGGAAAGCAGTTGGAGGATGGACGCACTTTGAGCGATTACAA 263054 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||||||||||| || || ||| | || ||||| ||||| |||||| Sbjct 263053 TATTCAAAAGGAAAGTACTTTGCATCTTGTCTTGCGATTGCGCGGTGGC 263005 >seq226 Length=603765 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||| ||||||| ||| | || || || || || || || || Sbjct 85852 ATGCAGATTTTCGTCAAGACTTTGACCGGAAAGACCATCACCCTCGATGTTGAGCCCTCT 85793 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||| ||||| || || || |||||| Sbjct 85792 GACACCATCGACAACGTCAAGACCAAGATCCAGGACAAGGAAGGAATTCCGCCTGATCAA 85733 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166 |||||||| || | ||||| || || | || ||| | || |||| ||| ||||| Sbjct 85732 CAGCGTTTGATCTTTGCCGGAAAGCAGCTCGAGGAC-GGCCGCACGTTGAGCGACTACAA 85674 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||| || | || ||||| |||||| | || ||||| || Sbjct 85673 CATCCAGAAGGAGTCTACTCTTCACTTGGTGTTGCGTCTCCGCGGTGGAAT 85623 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||| ||||||| ||| | || || || || || || || || Sbjct 86080 ATGCAGATTTTCGTCAAGACTTTGACCGGAAAGACCATCACCCTCGATGTTGAGCCCTCT 86021 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||| ||||| || || || |||||| Sbjct 86020 GACACCATCGACAACGTCAAGACCAAGATCCAGGACAAGGAAGGAATTCCGCCTGATCAA 85961 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166 |||||||| || | ||||| || || | || ||| | || |||| ||| ||||| Sbjct 85960 CAGCGTTTGATCTTTGCCGGAAAGCAGCTCGAGGAC-GGCCGCACGTTGAGCGACTACAA 85902 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||| || | || ||||| |||||| | || || || || Sbjct 85901 CATCCAGAAGGAGTCTACTCTTCACTTGGTGTTGCGTCTCCGCGGAGGTAT 85851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434916796238400